BAC Information

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BAC

Clone NameB6Ng01-254P20
Chromosome11 (Build37)
Map Location 20,893,516 - 20,894,127
singlet/doubletsinglet
Overlap genenone
Upstream geneSpred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
Downstream genePeli1, Vps54, Ugp2, LOC100042081, 4932414J04Rik, Mdh1, AV249152, Pgam1-ps1, LOC382494, LOC666047
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254P20.b
ACCGA061310
length1,034
definitionB6Ng01-254P20.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagaccttcaaagtagaaataacactaacacttctcaaatt
attccatgaaagaaagaagaaagatacatgcaatttctggttgtgtcatg
taatgcagactcaatgatgttttgctgaggcaagacctgtaagaggacac
atgatgtttggagagtataagtaggattcaatggacagtgtcggggcgct
tgcttagatagccatgcaaagcttagttgatctcatctttgcttcattga
gagagacatggcagagaacttctggagtcctagctgattttggtcattct
cactgacttgtgccgacacggcagaggcctggctgtttttgctgaatcat
gctgctgctgttgattcatgtttggtatcctgaccctattgaactagact
gctgatatcctgacaacagagattggaatcaccccaaagaactacttcta
aacaggtccacatccccttgtcatatttaccctcttttctctcctacctt
tggacaatgggctagaagggggcttaaagcatttcagaacacttattaaa
gtaggttttaaaaaatctaaccctacaggtacacatccaaattcttttta
caaagccagtattatcctaatttaaaaaaaaaaaaaaaagagagataaag
acacagtaagaaacagaaaatttagatcaatttccttgaccaacataaat
gcaaaaatgcttgcaaaaaacatgtcaaaaataccatataccataaccaa
attgacttcatcccagaggtgtagggacaatcatctacagatagggagaa
ggcttttgacaaaagccaacatctccttatgataaaagtcctgaaaagac
tcagggatagaacaagcacatctcactacaatggaggcttcatggcaaac
tgttagctgacatcatatgacatgggggaggagattgcttcacttgatgt
agtgttggggagtctagctagagcagtaagatgagagaagcaaataaaac
ggggtacaaaatagggaagaaggtcaaaatacct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_20893516_20894127
seq2: B6Ng01-254P20.b_51_662 (reverse)

seq1  ATACTGGCTTTGTAAAAAGAATTTGGATGTGTACCTGTAGGGTTAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGCTTTGTAAAAAGAATTTGGATGTGTACCTGTAGGGTTAGATTT  50

seq1  TTTAAAACCTACTTTAATAAGTGTTCTGAAATGCTTTAAGCCCCCTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACCTACTTTAATAAGTGTTCTGAAATGCTTTAAGCCCCCTTCTA  100

seq1  GCCCATTGTCCAAAGGTAGGAGAGAAAAGAGGGTAAATATGACAAGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTGTCCAAAGGTAGGAGAGAAAAGAGGGTAAATATGACAAGGGGA  150

seq1  TGTGGACCTGTTTAGAAGTAGTTCTTTGGGGTGATTCCAATCTCTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACCTGTTTAGAAGTAGTTCTTTGGGGTGATTCCAATCTCTGTTGT  200

seq1  CAGGATATCAGCAGTCTAGTTCAATAGGGTCAGGATACCAAACATGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATCAGCAGTCTAGTTCAATAGGGTCAGGATACCAAACATGAATC  250

seq1  AACAGCAGCAGCATGATTCAGCAAAAACAGCCAGGCCTCTGCCGTGTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGCAGCATGATTCAGCAAAAACAGCCAGGCCTCTGCCGTGTCGG  300

seq1  CACAAGTCAGTGAGAATGACCAAAATCAGCTAGGACTCCAGAAGTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCAGTGAGAATGACCAAAATCAGCTAGGACTCCAGAAGTTCTCT  350

seq1  GCCATGTCTCTCTCAATGAAGCAAAGATGAGATCAACTAAGCTTTGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTCTCTCAATGAAGCAAAGATGAGATCAACTAAGCTTTGCATG  400

seq1  GCTATCTAAGCAAGCGCCCCGACACTGTCCATTGAATCCTACTTATACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTAAGCAAGCGCCCCGACACTGTCCATTGAATCCTACTTATACTC  450

seq1  TCCAAACATCATGTGTCCTCTTACAGGTCTTGCCTCAGCAAAACATCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACATCATGTGTCCTCTTACAGGTCTTGCCTCAGCAAAACATCATT  500

seq1  GAGTCTGCATTACATGACACAACCAGAAATTGCATGTATCTTTCTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCATTACATGACACAACCAGAAATTGCATGTATCTTTCTTCTTT  550

seq1  CTTTCATGGAATAATTTGAGAAGTGTTAGTGTTATTTCTACTTTGAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGGAATAATTTGAGAAGTGTTAGTGTTATTTCTACTTTGAAGGT  600

seq1  CTGATGGAATTC  612
      ||||||||||||
seq2  CTGATGGAATTC  612