BAC Information

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BAC

Clone NameB6Ng01-255A02
Chromosome11 (Build37)
Map Location 19,777,828 - 19,939,953
singlet/doubletdoublet
Overlap geneLOC665868, LOC100041937, Spred2
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1
Downstream geneActr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255A02.bB6Ng01-255A02.g
ACCGA061321GA061322
length969689
definitionB6Ng01-255A02.b B6Ng01-255A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,939,271 - 19,939,953)(19,777,828 - 19,778,514)
sequence
gaattcagcccagggccccacacatgcgaggcaagctcttagccctggtt
tgtttttctttctttcttactgggatctctggctggcctcataatggaaa
cttgcagcaatccttctgcctctgcttcctcagttccgggattacaggtg
acctcacaatacttggagggaggggacagtagttgccagacatgatagca
ctggaccttcatttcaggcctcagggggcagaggcaagcggatttccatg
agttccaggccaacacacacacacacacacacacatacacacacacacac
acacacacacacacacacacacacacacgacaaaaactgatcaaaagtaa
cctggagaaagtgagggaggaagccacacagacaccgagggcagtgtact
tcagatgagggaacagtaaatgtgaaggttctgaggcaggaacgtgtctg
aagaccaagggagccagtgtgtgtggctgtgggaataaaaagaagggggt
agagagatggttccgtggttcagaacccttgctgctcttacctatgacct
gggttcaattcccagcacccacgtggtggctcgaccatgtgcaacgccag
ttctgtaggctctgctgccctctccttctgccctagagcaccaggctcac
acgtaatgctctatgtataccatatattaaaaaaaattttttttttttga
agaaataaacttgaaactaggtaataagaaccaggctagatcctcttcca
ctcagccctgcaggagaacctaggccacccccaggaatgccacagtgacc
gctgcactaaagctttgccctctgggtgtgtggcatcctgcagagggtcc
agagtcggttggctggcagctttgctgtgtggaagggaagtgcttagcgg
ggaagagcgggagtggctgaatcccttgccagacttcataatgctttcag
agtctgttcttcccatggg
gaattcatgtgaggcagtccagtaattctacagaacaagataaaggagat
ttttcactgattaagatgaaagttcagggggaaaagaaacaaagaaaaaa
gaaagttcaggactagtgtactggtccatccccataatcccagaactcag
aaggccggagcaggaggatcatgaattggagagtagctaactatacaaag
tgagaccttgtctcaacaaacaaatagctgagggttgggggggggcgtgc
agattggagggcattgaccagctgcatgtggtagacagctttcatgtgtg
attgtgggcagagctagcagtgcagtgagtaattgcagagaagagtctgc
tacttcttagccctaagcttgggtctatacagtctgatcacagagaccct
gtcacctgggggctcccatgtcaggactgatgacctgtgatcggggaact
ctgccgtagcttgtcagatcttagtacattttgtaggaaccgctgatggc
aaggcagggatgatccatcgaagaggaagaaaagaacatgctgttttgtc
attttaaaacaaggtttcacaccgtcagtgatgctggattcacattggtg
tgacctcctgcctcaattctggaatacaggtgtgagtgagccaacacacc
cagcttaaggagtattttttgatgggaaacagcttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19939271_19939953
seq2: B6Ng01-255A02.b_46_728 (reverse)

seq1  TTTTTAATATATGGTATACATAGAGCATTACGTGTGAGCCTGGTGCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATATATGGTATACATAGAGCATTACGTGTGAGCCTGGTGCTCTA  50

seq1  GGGCAGAAGGAGAGGGCAGCAGAGCCTACAGAACTGGCGTTGCACATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAGGAGAGGGCAGCAGAGCCTACAGAACTGGCGTTGCACATGGT  100

seq1  CGAGCCACCACGTGGGTGCTGGGAATTGAACCCAGGTCATAGGTAAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCACCACGTGGGTGCTGGGAATTGAACCCAGGTCATAGGTAAGAGC  150

seq1  AGCAAGGGTTCTGAACCACGGAACCATCTCTCTACCCCCTTCTTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGTTCTGAACCACGGAACCATCTCTCTACCCCCTTCTTTTTATT  200

seq1  CCCACAGCCACACACACTGGCTCCCTTGGTCTTCAGACACGTTCCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCCACACACACTGGCTCCCTTGGTCTTCAGACACGTTCCTGCCT  250

seq1  CAGAACCTTCACATTTACTGTTCCCTCATCTGAAGTACACTGCCCTCGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTTCACATTTACTGTTCCCTCATCTGAAGTACACTGCCCTCGGT  300

seq1  GTCTGTGTGGCTTCCTCCCTCACTTTCTCCAGGTTACTTTTGATCAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTGGCTTCCTCCCTCACTTTCTCCAGGTTACTTTTGATCAGTTT  350

seq1  TTGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG  400

seq1  TGTGTGTGTGTGTGTGTGTGTTGGCCTGGAACTCATGGAAATCCGCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTTGGCCTGGAACTCATGGAAATCCGCTTGC  450

seq1  CTCTGCCCCCTGAGGCCTGAAATGAAGGTCCAGTGCTATCATGTCTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCCCTGAGGCCTGAAATGAAGGTCCAGTGCTATCATGTCTGGCA  500

seq1  ACTACTGTCCCCTCCCTCCAAGTATTGTGAGGTCACCTGTAATCCCGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGTCCCCTCCCTCCAAGTATTGTGAGGTCACCTGTAATCCCGGAA  550

seq1  CTGAGGAAGCAGAGGCAGAAGGATTGCTGCAAGTTTCCATTATGAGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAGCAGAGGCAGAAGGATTGCTGCAAGTTTCCATTATGAGGCCA  600

seq1  GCCAGAGATCCCAGTAAGAAAGAAAGAAAAACAAACCAGGGCTAAGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGATCCCAGTAAGAAAGAAAGAAAAACAAACCAGGGCTAAGAGCT  650

seq1  TGCCTCGCATGTGTGGGGCCCTGGGCTGAATTC  683
      |||||||||||||||||||||||||||||||||
seq2  TGCCTCGCATGTGTGGGGCCCTGGGCTGAATTC  683

seq1: chr11_19777828_19778514
seq2: B6Ng01-255A02.g_66_754

seq1  GAATTCATGTGAGGCAGTCCAGTAATTCTACAGAACAAGATAAAGGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGAGGCAGTCCAGTAATTCTACAGAACAAGATAAAGGAGAT  50

seq1  TTTTCACTGATTAAGATGAAAGTTCAGGGGGAAAAGAAACAAAGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTGATTAAGATGAAAGTTCAGGGGGAAAAGAAACAAAGAAAAAA  100

seq1  GAAAGTTCAGGACTAGTGTACTGGTCCATCCCCATAATCCCAGAACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCAGGACTAGTGTACTGGTCCATCCCCATAATCCCAGAACTCAG  150

seq1  AAGGCCGGAGCAGGAGGATCATGAATTGGAGAGTAGCTAACTATACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCGGAGCAGGAGGATCATGAATTGGAGAGTAGCTAACTATACAAAG  200

seq1  TGAGACCTTGTCTCAACAAACAAATAGCTGAGGGTTGGGGGGGGGCGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTTGTCTCAACAAACAAATAGCTGAGGGTTGGGGGGGGGCGTGC  250

seq1  AGATTGGAGGGCATTGACCAGCTGCATGTGGTAGACAGCTTTCATGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGAGGGCATTGACCAGCTGCATGTGGTAGACAGCTTTCATGTGTG  300

seq1  ATTGTGGGCAGAGCTAGCAGTGCAGTGAGTAATTGCAGAGAAGAGTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGCAGAGCTAGCAGTGCAGTGAGTAATTGCAGAGAAGAGTCTGC  350

seq1  TACTTCTTAGCCCTAAGCTTGGGTCTATACAGTCTGATCACAGAGACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTAGCCCTAAGCTTGGGTCTATACAGTCTGATCACAGAGACCCT  400

seq1  GTCACCTGGGGGCTCCCATGTCAGGACTGATGACCTGTGATCGGGGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGGGGGCTCCCATGTCAGGACTGATGACCTGTGATCGGGGAACT  450

seq1  CTGCCGTAGCTTGTCAGATCTTAGTACATTTTGTAGGAACCGCTGATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTAGCTTGTCAGATCTTAGTACATTTTGTAGGAACCGCTGATGGC  500

seq1  AAGGCAGGGATGATCCATCGAAGAGGAAGAAAAGAACATGCTGTTTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGGATGATCCATCGAAGAGGAAGAAAAGAACATGCTGTTTTGTC  550

seq1  ATTTTAAAACAAGGTTTCACACCGTCAGTGATGCTGGATTCACATTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAACAAGGTTTCACACCGTCAGTGATGCTGGATTCACATTGGTG  600

seq1  TGACCTCCTGCCTCAATTCTGGAATACAGGTGTGAGTGAGCCAACACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCTGCCTCAATTCTGGAATACAGGTGTGAGTGAGCCAACACACC  650

seq1  CAGCTAAAGGAGTA-TTTTTGAT-GGAAACAGCGTATTT  687
      ||||| |||||||| |||||||| ||||||||| |||||
seq2  CAGCTTAAGGAGTATTTTTTGATGGGAAACAGCTTATTT  689