BAC Information

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BAC

Clone NameB6Ng01-256G22
Chromosome11 (Build37)
Map Location 114,338,238 - 114,504,333
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc39a11, Sstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2, LOC100041739, LOC634710, 4932435O22Rik
Downstream geneRpl38, Ttyh2, Dnaic2, Kif19a, 1500005I02Rik, Gpr142, Gprc5c, Cd300a, Cd300lb, Cd300c, 4732429D16Rik, Cd300d, LOC629970, LOC100043123, LOC100043125, Clm3, Cd300e, Cd300lf, Rab37, Slc9a3r1, Nat9, Tmem104, Grin2c, Fdxr, Fads6, Otop2, Ush1g, Otop3, C630004H02Rik, Cdr2l, Ict1, Atp5h, Kctd2, 4933422H20Rik, Slc16a5, Armc7, Nt5c, Hn1, Sumo2, Nup85, Gga3, Mrps7, Mif4gd, Slc25a19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G22.bB6Ng01-256G22.g
ACCGA062393GA062394
length262107
definitionB6Ng01-256G22.b B6Ng01-256G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,504,072 - 114,504,333)(114,338,238 - 114,338,344)
sequence
agtcgaggatacagttcaatggagaaggactccccaagcatgcacgaagt
cctgggttcgatcctcagcactgaaaaaaaaaaaagaaattaaagtattg
atctgccatgaatcagaagcgaagactccactgtctgctacctgaggaag
ccaaagaagtatggcaaagaagtatggacacaggtcatcgttcaagtgag
gatgctgggccaggcaaggggaggggcagcttaacctggtgctgtgggtg
agtgggaggatg
agggacccagcggggtttacagggtcagcctaggaacccagacctctgtg
ttatgacagctttcgtagcactctctctctctctctctctgtctgtgtgt
gtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_114504072_114504333
seq2: B6Ng01-256G22.b_51_312 (reverse)

seq1  CATCCTCCCACTCACCCACAGCACCAGGTTAAGCTGCCCCTCCCCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCCACTCACCCACAGCACCAGGTTAAGCTGCCCCTCCCCTTGCC  50

seq1  TGGCCCAGCATCCTCACTTGAACGATGACCTGTGTCCATACTTCTTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGCATCCTCACTTGAACGATGACCTGTGTCCATACTTCTTTGCC  100

seq1  ATACTTCTTTGGCTTCCTCAGGTAGCAGACAGTGGAGTCTTCGCTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTTTGGCTTCCTCAGGTAGCAGACAGTGGAGTCTTCGCTTCTGA  150

seq1  TTCATGGCAGATCAATACTTTAATTTCTTTTTTTTTTTTCAGTGCTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCAGATCAATACTTTAATTTCTTTTTTTTTTTTCAGTGCTGAGG  200

seq1  ATCGAACCCAGGACTTCGTGCATGCTTGGGGAGTCCTTCTCCATTGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAACCCAGGACTTCGTGCATGCTTGGGGAGTCCTTCTCCATTGAACT  250

seq1  GTATCCTCGACT  262
      ||||||||||||
seq2  GTATCCTCGACT  262

seq1: chr11_114338238_114338344
seq2: B6Ng01-256G22.g_69_175

seq1  AGGGACCCAGCGGGGTTTACAGGGTCAGCCTAGGAACCCAGACCTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCCAGCGGGGTTTACAGGGTCAGCCTAGGAACCCAGACCTCTGTG  50

seq1  TTATGACAGCTTTCGTAGCACTCTCTCTCTCTCTCTCTCTGTCTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACAGCTTTCGTAGCACTCTCTCTCTCTCTCTCTCTGTCTGTGTGT  100

seq1  GTGTGTG  107
      |||||||
seq2  GTGTGTG  107