BAC Information

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BAC

Clone NameB6Ng01-262H21
Chromosome11 (Build37)
Map Location 7,077,622 - 7,078,702
singlet/doubletsinglet
Overlap geneAdcy1
Upstream geneNudcd3, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream geneLOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262H21.bB6Ng01-262H21.g
ACCGA066894GA066895
length1,2251,052
definitionB6Ng01-262H21.b B6Ng01-262H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaacctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacattg
tacttgaagtcctagccatagcaattcgacaacaaaaggagatcaagggg
atacaatttgtcaggaagaagtcaaaatatcactttttgcagataatacg
tagtatatataagtgaccctaaaaattccatcagagaactcctaaacctg
ataaacagcttcggtgaagtagctggatataaaattaactcaaacaagtc
aatggcctttctctacacaaaggacaaacaggctgagaaagaaattaggg
aaacaacacccttctcaatagtcacaaataatataaaataccttggcgtg
actctaactaaggaagtgacagatctgtagaataagaacttcaagtctct
gaagaaagaaattaaagaagatctcagaagatggaaagatcccccatgct
cacggattggcaggatcaatatagtaaaaatggctatcttgccaaaagca
atccccagattcaatgcaatccccttcaaaatttcaactcaattcttcaa
cgaattagaaagggcaatctgcaaattcatctggaataacaaaaaatcta
ggatagtaaaaactcttctcaaggataaaaaaaatctctggtggaatcac
catgcatgacctcaagctgtactacagagcaattgtgattaaaaactgca
tggtactggtatagcgacagacaagtagaccaatggaatagaattgaaaa
cccagaaatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaaaaaaagacagcatttcaacaaatggtgctgg
cacaactggcgggtatcaagtagaataatgtgaattgatccattcctatc
tccttgtactaaggtcaaatctagtggattacgaacttccacaataaaaa
ccagagaacactgaaactatagagggaagaaagttaggaagcttcgaaga
tatggtaacaggggaaaaaattctgatagaaacagccaattgtttgttgc
ctgtaagaattgaattcacaaatggaaccttctattaaatgcagagcctt
tagtggcacagggccaagaagagtc
gaattcacagaagcccaggactaaaatccaggtttaaaaaatatgaaggt
gtaaaaatgaacatggcttatgtcactcgggggtcatgtggcatgtgaca
ttttgaataataactcctcaccccagaaaaagagtcatggatgacttcag
aacgtgcatacgaccatttgtctttcaatgaaaatggccagagtttagtc
aagcaatttttctcctttatttttgttaaataagaccccagagagtatag
tgcaaacactcagtagaaaagttgcagttaagaaatgtacattcacatta
acatttcagttcattcactttttaaataaaaataggacaaattattcaat
tactcatctcgatttaacaatcttgaaaaagactggaaggtgctctacag
agttgacataaaaatagacccgtattgattatacaaatctattgtgagag
gttacccagtgatattgagttattgtgaatataatcatcgagttctcata
gctacagacacatctggtaagtgtatcgtgtgggataaaatgcccccttt
gtccatgcaccctctatcccactaagggactcaaagctttcttgataaac
acaggacacaggtgcttacacatgccttttttttttcttttctttttttt
ttttttaagtaaggaactccagaagtgggctttgggcttactttaaatca
agatactgctaagacgtgatcataacaattccatttgtgcaaattagtga
gccatcagcttaagtgggcacggtgggaaagggagcacggtgggaaaggg
agccactgcacagtaagtgctggagccacacgggctccacggaacctgga
ttggctgagggcagcactgtgctcccaatgagcggtagaggtgacttgga
acaagcccaagccatccattctttgtgcatgctacataacgtcaaattca
aactagtgcacacagtagatttcagcatgcatccgtagtgcaatgctgca
tatactcattacaggatgagcacgagcagccctcttcccaagcatgttgc
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7077622_7078702
seq2: B6Ng01-262H21.g_67_1118 (reverse)

seq1  GAGCACACATGCCTGGGGAAGAGGGGCCTGCTCTGTTGCCTTCATCCCTG  50
      ||||| ||||| || ||||||||||  ||||||   |||  |||| ||||
seq2  GAGCA-ACATG-CTTGGGAAGAGGG--CTGCTC--GTGC--TCAT-CCTG  41

seq1  TTAAAATTGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTG  100
      |    | ||||||||||| |||   ||||||||||||  |||||||  ||
seq2  T----AATGAGTATATGC-AGC--ATTGCACTACGGA--TGCATGC--TG  80

seq1  AAATTCCTTACTGTGTGCACCTTAGTTTGAATTTGACGTTATGTAGCATG  150
      ||||    ||||||||||||  ||||||||||||||||||||||||||||
seq2  AAAT---CTACTGTGTGCAC--TAGTTTGAATTTGACGTTATGTAGCATG  125

seq1  CACAAAAGAATGGATGGGCTTGGGCTTGTTCCCAAGTCACCTCTACCGCT  200
      ||| ||||||||||| |||||||||||||| |||||||||||||||||||
seq2  CAC-AAAGAATGGAT-GGCTTGGGCTTGTT-CCAAGTCACCTCTACCGCT  172

seq1  CATTGGGAGCACAGTGCTGCCCTCAGCCAATCCCAGGTTCCGTGGAGCCC  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATTGGGAGCACAGTGCTGCCCTCAGCCAAT-CCAGGTTCCGTGGAGCCC  221

seq1  GTGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCC  271

seq1  CTTTCCCACCGTGCCCACTTAAGCTGATGGCTCACTAATTTGCACAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCACCGTGCCCACTTAAGCTGATGGCTCACTAATTTGCACAAATG  321

seq1  GAATTGTTATGATCACGTCTTAGCAGTATCTTGATTTAAAGTAAGCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTATGATCACGTCTTAGCAGTATCTTGATTTAAAGTAAGCCCAA  371

seq1  AGCCCACTTCTGGAGTTCCTTACTTAAAAAAAAAAAAAAGAAAAGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACTTCTGGAGTTCCTTACTTAAAAAAAAAAAAAAGAAAAGAAAAA  421

seq1  AAAAAGGCATGTGTAAGCACCTGTGTCCTGTGTTTATCAAGAAAGCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCATGTGTAAGCACCTGTGTCCTGTGTTTATCAAGAAAGCTTTG  471

seq1  AGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATTTTATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATTTTATCCC  521

seq1  ACACGATACACTTACCAGATGTGTCTGTAGCTATGAGAACTCGATGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGATACACTTACCAGATGTGTCTGTAGCTATGAGAACTCGATGATTA  571

seq1  TATTCACAATAACTCAATATCACTGGGTAACCTCTCACAATAGATTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACAATAACTCAATATCACTGGGTAACCTCTCACAATAGATTTGTA  621

seq1  TAATCAATACGGGTCTATTTTTATGTCAACTCTGTAGAGCACCTTCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATACGGGTCTATTTTTATGTCAACTCTGTAGAGCACCTTCCAGT  671

seq1  CTTTTTCAAGATTGTTAAATCGAGATGAGTAATTGAATAATTTGTCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAGATTGTTAAATCGAGATGAGTAATTGAATAATTTGTCCTAT  721

seq1  TTTTATTTAAAAAGTGAATGAACTGAAATGTTAATGTGAATGTACATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAAAAAGTGAATGAACTGAAATGTTAATGTGAATGTACATTTC  771

seq1  TTAACTGCAACTTTTCTACTGAGTGTTTGCACTATACTCTCTGGGGTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGCAACTTTTCTACTGAGTGTTTGCACTATACTCTCTGGGGTCTT  821

seq1  ATTTAACAAAAATAAAGGAGAAAAATTGCTTGACTAAACTCTGGCCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACAAAAATAAAGGAGAAAAATTGCTTGACTAAACTCTGGCCATTT  871

seq1  TCATTGAAAGACAAATGGTCGTATGCACGTTCTGAAGTCATCCATGACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAAGACAAATGGTCGTATGCACGTTCTGAAGTCATCCATGACTC  921

seq1  TTTTTCTGGGGTGAGGAGTTATTATTCAAAATGTCACATGCCACATGACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGGGTGAGGAGTTATTATTCAAAATGTCACATGCCACATGACC  971

seq1  CCCGAGTGACATAAGCCATGTTCATTTTTACACCTTCATATTTTTTAAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGTGACATAAGCCATGTTCATTTTTACACCTTCATATTTTTTAAAC  1021

seq1  CTGGATTTTAGTCCTGGGCTTCTGTGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  CTGGATTTTAGTCCTGGGCTTCTGTGAATTC  1052