BAC Information

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BAC

Clone NameB6Ng01-263H10
Chromosome11 (Build37)
Map Location 103,264,242 - 103,264,796
singlet/doubletsinglet
Overlap genePlekhm1
Upstream geneSlc25a39, Grn, BC025575, Itga2b, Mdk-ps1, LOC100040792, Fzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap, 3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2, Fmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik
Downstream geneLrrc37a, Gm884, Lyzl6, Rprml, Gosr2, Wnt9b, Wnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263H10.bB6Ng01-263H10.g
ACCGA067624GA067625
length549813
definitionB6Ng01-263H10.b B6Ng01-263H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggacttgctgccaaactagtccaaccaaatcagcaagctccaaagtca
ctgagaggcccggtctcaaaaagcaagcgtgggtgattggcaggatggct
cagtgggtaaaagtacttgctgccaagcctgacctggctcagtctgcaga
acccacatgatggaaagagaaaacagactcccataggttttccatgacat
gctatagggcacatacacagacagacagacagacagacagacacacacac
acacacacacacacacacacacgagacagagagagagggatagtgagtgt
gagagggagagggagggagaatgaatgaatgaatgaatgaatggtcagga
tctcctgcaagcctggctttgttgtaaatgtctctccaactgaagcctct
ctctgtgtagtgttcatttatttcaagaagagtttatgaaagctggctac
agtgatttgtgccagcaaccctagaaccctgaaggtcaaagcaggtaaac
caggagtttatcctttgctatggagtgagtttgaggcccatctagacta
gaattctgtcttatgtagtgggctttaaatctaatcagaaagtgattggt
aacttcgataacaattatgccactattgcaccagtggcttgttatagttg
ctgacgttttacaacttggtaattccagtcattctttttctcctccatta
gtgtacatagcactttccagcattttccagctatgaaaactagctattag
gggataaagcttccagattgaatgacaatagcccccataggctcatatat
ttgaatacttggtcctcagttggtgaaattgtttgggaaggattagaaag
aatggccttcttggaggagttttgtcactgggtgtaggccttaaggtttt
aaaaggctctagctattctcagtgctcttttactttctgccttctatttg
tggatcaggatgtaagctctcagctgtttctgcaaccacacctatacttt
ccatcaaagactcgaacctgctgaaagtataagcttaattaaacactttc
taagttttcttggtcatggtgttttatcataggctatataaaagtagctc
aggcaagtagccacttgatttctccatgccctatgactcaatattttgta
tcttcagctatatgggcttatgatcaagttctagaggggtaccaatagca
ttggaaatagcctgctagtattaggagggatctacggaaagccatttcga
ccacactggaaaggagtagtcatattcaggtgtacgttggctttgattga
tagcttatgttgtctgtaggaggcatcggactctcattatacggtaactc
tggttactttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_103264242_103264796
seq2: B6Ng01-263H10.b_46_600

seq1  GAATTCCAGGACTTGCTGCCAAACTAGTCCAACCAAATCAGCAAGCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTTGCTGCCAAACTAGTCCAACCAAATCAGCAAGCTCCA  50

seq1  AAGTCACTGAGAGGCCCGGTCTCAAAAAGCAAGCGTGGGTGATTGGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTGAGAGGCCCGGTCTCAAAAAGCAAGCGTGGGTGATTGGCAGG  100

seq1  ATGGCTCAGTGGGTAAAAGTACTTGCTGCCAAGCCTGACCTGGCTCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGTGGGTAAAAGTACTTGCTGCCAAGCCTGACCTGGCTCAGTC  150

seq1  TGCAGAACCCACATGATGGAAAGAGAAAACAGACTCCCATAGGTTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACCCACATGATGGAAAGAGAAAACAGACTCCCATAGGTTTTCCA  200

seq1  TGACATGCTATAGGGCACATACACAGACAGACAGACAGACAGACAGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCTATAGGGCACATACACAGACAGACAGACAGACAGACAGACAC  250

seq1  ACACACACACACACACACACACACACACGAGACAGAGAGAGAGGGATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACGAGACAGAGAGAGAGGGATAGT  300

seq1  GAGTGTGAGAGGGAGAGGGAGGGAGAATGAATGAATGAATGAATGAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGAGAGGGAGAGGGAGGGAGAATGAATGAATGAATGAATGAATGG  350

seq1  TCAGGATCTCCTGCAAGCCTGGCTTTGTTGTAAATGTCTCTCCAACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATCTCCTGCAAGCCTGGCTTTGTTGTAAATGTCTCTCCAACTGAA  400

seq1  GCCTCTCTCTGTGTAGTGTTCATTTATTTCAAGAAGAGTAGATGAAAGCT  450
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  GCCTCTCTCTGTGTAGTGTTCATTTATTTCAAGAAGAGTTTATGAAAGCT  450

seq1  GGCTACAGTGATTTGTGCCAGCAACCCTAGAACCCTGAAGGTCAAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAGTGATTTGTGCCAGCAACCCTAGAACCCTGAAGGTCAAAGCAG  500

seq1  GAAAACCAGGAGTTTATCCTTTGCTATGGAGTGAGTTTGAGGCCCATCTA  550
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCAGGAGTTTATCCTTTGCTATGGAGTGAGTTTGAGGCCCATCTA  550

seq1  GACTA  555
      |||||
seq2  GACTA  555