BAC Information

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BAC

Clone NameB6Ng01-265N02
Chromosome11 (Build37)
Map Location 15,435,766 - 15,436,739
singlet/doubletsinglet
Overlap genenone
Upstream gene1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
Downstream geneLOC665660, Vstm2, Sec61g, Akt2-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265N02.bB6Ng01-265N02.g
ACCGA069370GA069371
length1,0701,134
definitionB6Ng01-265N02.b B6Ng01-265N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttggaaaattttacctttgataagtatgaagggacctcctt
ttttttttgtttgtttgatgaatttgggttagaagtcgattttattcaac
attagaatggctacttcagcttgtttcttgtgaccatatgcttgaaaaat
tgttttccagccttttaccctgaggtaatgtctgcctttttccctgaggt
gggtttcatttaagcagcaaaaagttgtgtcctatttatggagccattct
gtctatgtctttttatttgggaattgattccatttatattaagagatatt
aaagaaaagtaattgttgcttcctgttattttggtgttagagttgggatt
ctgttcttgtggccatcttcttttaggtttgttgaaggattactttcttg
attttcttggacatattttctgtccttgtgttggtgtttccctttattat
cctttgaagggatggagttgtggaaagatattgtgtgaatttggttttgt
catggaatactttggtttctccatctatggtaattgagagttttgcttgg
tattgtagcctagacctgcatttgtgttctcttagtgtctgtataacatc
tgtccaggctcttctggctttcatagtctctggtgaaaagtctggtgtaa
ttctaataggtctgcctttatatgttacttgaccttttccccttcctgct
tttaatattctgtcttcatttagtgcatttgttgatctgattattaattg
gtcttggtttctgttactaagtttttttcatttgcctttcaccatctagt
aatctctggtgcagatgttctagctgactctggctggagttttgttcatc
ttgtgattctttagcctcctgtcagcatttcctgggagaccaactcttct
cctgagtcccagttgtcagagtgcttcttctgcaggtcatctctccttct
tgcctggaaaggtggccagagtctgcacttcagatccaacttctgatttc
ctgggtcaaatccctctcttgagtctgacttcttcttctggcaaggaaag
tgtgtctagggtctctggat

gaattccacactttggtcttcagtcttcttaaatatcatgtggtctgtga
attgtattttgggtattctgagctttgaggttaataaccacatattagtg
agtgtatactatgtgtgttcttttgtgactgggttacctcactcaggacg
atattttctagttccaacactgtcgacttgatgatggtgaataaactttt
cttgaattttgtttgggagaattttattgattatttgtgcatggatattc
atgagagaaattggtctgaaattctatttctttgttgagtctttgtgtag
tatagaatagatttctaagtaatccattcaacaagaaaataatcatactt
cataatgagaagaattttgacttgaagacaaatgacaagaaaaattaaac
aaaacttatagattataattcatcccatctccatcaagatatatccagtt
gcaaatgcttctaaaatgaaataaaataaaaataattgtaactgtatgtc
caattttaataaaagacaatgaagaaaactaaatccaatacaggagacag
gatctaatgtacaacagattagaatttaatgtttagtaaagaaataatag
gaaaatgactgggaataattatggagctaaagtcatttttaaaaatcagc
aaattgataaataatatttaaaatgaacatgtaaaattaagtatatgagt
aatgaaagtttaataatgcattccttagatgaattaataggaaatactat
taatagaaatataaccacatttcatgaaattgaaaaattccttggaaata
tgagctatcataattttgccaggagtagtataaacagctggccaggccct
agttggtgaccatggttctatttagtatgtaaagaagataatttgtcatc
ctccatggacgaagcattgtgatttactctgaatactgctttgctctggt
acaaatgcctgactgatactattcatggaactaaactacaaactatggtc
tttcgtacatttagaccaaaacattcctcatgataatcagcaaacccatc
cagcaaaggattgtgactatcccaaatttagttttacccaagagtagaag
gtgcctgaacagtaaaaaataaaaatctatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_15435766_15436739
seq2: B6Ng01-265N02.g_231_1200

seq1  CAACACTGTCGACTTGATGATGGTGAATAAACTTTTCTTGAATTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTGTCGACTTGATGATGGTGAATAAACTTTTCTTGAATTTTGTTT  50

seq1  GGGAGAATTTTATTGATTATTTGTGCATGGATATTCATGAGAGAAATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATTTTATTGATTATTTGTGCATGGATATTCATGAGAGAAATTGG  100

seq1  TCTGAAATTCTATTTCTTTGTTGAGTCTTTGTGTAGTATAGAATAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATTCTATTTCTTTGTTGAGTCTTTGTGTAGTATAGAATAGATTT  150

seq1  CTAAGTAATCCATTCAACAAGAAAATAATCATACTTCATAATGAGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAATCCATTCAACAAGAAAATAATCATACTTCATAATGAGAAGAA  200

seq1  TTTTGACTTGAAGACAAATGACAAGAAAAATTAAACAAAACTTATAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTTGAAGACAAATGACAAGAAAAATTAAACAAAACTTATAGATT  250

seq1  ATAATTCATCCCATCTCCATCAAGATATATCCAGTTGCAAATGCTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCATCCCATCTCCATCAAGATATATCCAGTTGCAAATGCTTCTAA  300

seq1  AATGAAATAAAATAAAAATAATTGTAACTGTATGTCCAATTTTAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATAAAATAAAAATAATTGTAACTGTATGTCCAATTTTAATAAAA  350

seq1  GACAATGAAGAAAACTAAATCCAATACAGGAGACAGGATCTAATGTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAAGAAAACTAAATCCAATACAGGAGACAGGATCTAATGTACAA  400

seq1  CAGATTAGAATTTAATGTTTAGTAAAGAAATAATAGGAAAATGACTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAGAATTTAATGTTTAGTAAAGAAATAATAGGAAAATGACTGGGA  450

seq1  ATAATTATGGAGCTAAAGTCATTTTTAAAAATCAGCAAATTGATAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATGGAGCTAAAGTCATTTTTAAAAATCAGCAAATTGATAAATAA  500

seq1  TATTTAAAATGAACATGTAAAATTAAGTATATGAGTAATGAAAGTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAATGAACATGTAAAATTAAGTATATGAGTAATGAAAGTTTAAT  550

seq1  AATGCATTCCTTAGATGAATTAATAGGAAATACTATTAATAGAAATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTCCTTAGATGAATTAATAGGAAATACTATTAATAGAAATATAA  600

seq1  CCACATTTCATGAAATTGAAAAATTCCTTGGAAATATGAGCTATCATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTCATGAAATTGAAAAATTCCTTGGAAATATGAGCTATCATAAT  650

seq1  TTTGCCAGGAGTAGTATAAACAGCTGGCCAGGCCCTAGTTGGTGACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGAGTAGTATAAACAGCTGGCCAGGCCCTAGTTGGTGACCATG  700

seq1  GTTCTATTTAGTATGTAAAGAAGATAATTTGTCATCCTCCATGGACGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTTAGTATGTAAAGAAGATAATTTGTCATCCTCCATGGACGAAG  750

seq1  CATTGTGATTTACTCTGAATACTGCTTTGCTCTGGTACAAATGCCTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGATTTACTCTGAATACTGCTTTGCTCTGGTACAAATGCCTGACT  800

seq1  GATACTATTCATGGAACTAAACTACAAACTATGGTCTTTCGTACATTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTATTCATGGAACTAAACTACAAACTATGGTCTTTCGTACATTTAG  850

seq1  ACC-AAACATTCCTCATGATAAATCAGCAAACCCAATCCAGCAAA-GATT  898
      ||| |||||||||||||||| ||||||||||||| |||||||||| ||||
seq2  ACCAAAACATTCCTCATGAT-AATCAGCAAACCC-ATCCAGCAAAGGATT  898

seq1  GTGAACTATTCCAAATTTAGGTTTTACCAAGAGTTAGGAAGGTGCTTGAA  948
      ||| ||||| |||||||||| |||  ||||||||   |||||||| ||||
seq2  GTG-ACTATCCCAAATTTAGTTTTACCCAAGAGT--AGAAGGTGCCTGAA  945

seq1  CAGTAAAAATAAAATATCCTATGCTG  974
      |||||||||  ||| || ||||||||
seq2  CAGTAAAAAATAAAAAT-CTATGCTG  970


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