BAC Information

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BAC

Clone NameB6Ng01-266K21
Chromosome11 (Build37)
Map Location 53,778,610 - 53,779,151
singlet/doubletsinglet
Overlap geneSlc22a21
Upstream geneFstl4, LOC623205, Hspa4, Zcchc10, Aff4, LOC100040576, Leap2, Uqcrq, Gdf9, Shroom1, ENSMUSG00000049427, Ankrd43, LOC546500, Sept8, Cycl, Kif3a, Il4, Il13, LOC667731, Rad50, Il5, Irf1, LOC622459, Slc22a5, LOC667762
Downstream geneSlc22a4, Pdlim4, P4ha2, LOC623647, Dbi-ps, Csf2, Il3, Acsl6, 4930404A10Rik, LOC100041400, LOC100041411, Fnip1, Rapgef6, Cdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266K21.bB6Ng01-266K21.g
ACCGA070017GA070018
length698190
definitionB6Ng01-266K21.b B6Ng01-266K21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcccaaggtcttgctcaaggacgttctaggactgttggaac
actggctttagctatgtcagaattcaatcttaaaaggcacttataatagg
ataatactaaaagagagcacgtggatccatacactagactaacacaggaa
tggaaaattaatgtatgggttagagagaacgccagactccaggagtgagt
ttccttgaaactcttctgcctcagtgagtagcttccaagcctcttggctt
gtcaagctgactcgaccagagtgcgtggcagtcagagtgccatagaagtg
tccatcaggggtcaggggagggtttactgagaagcaaaccatgagctgag
agttgaaagatgcgtagaaatttggtgtcaaaggggtgttgagaagaaga
gcactctgggcaggaaaacccaccatctgttaaagtcttgggaatagaaa
aaagttcactgtggttgaggtctggaggctcaggtggagacaaggaccac
gaggcaggcagaggcctgagcggatgggcaaatggggcttagctcagacc
acagtgagaaatttggatttgagaagtgaggagccttgagagttgttttt
taaaccagagttgttttttaaaccttttaagaagggatttgataggcttg
aattgatggaaggaaaacaagaggcatctttttaaatcgtgtgtgtgt
ctctgtgtcttcaagtcccccgaagtccagacaggccttggtcaggaaga
cagtgtctggggagcatttgtgtcccatttggtggtggtattggtaggga
gggtgatgggtggagtctaccaagttagtatatggtaacatgcttttaaa
agttttaggccatttccctatttctcacgtgtagtttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_53778610_53779151
seq2: B6Ng01-266K21.b_200_741 (reverse)

seq1  ACACACACACGATTTAAAAAGATGCCTCTTGTTTTCCTTCCATCAATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACGATTTAAAAAGATGCCTCTTGTTTTCCTTCCATCAATTCA  50

seq1  AGCCTATCAAATCCCTTCTTAAAAGGTTTAAAAAACAACTCTGGTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATCAAATCCCTTCTTAAAAGGTTTAAAAAACAACTCTGGTTTAAA  100

seq1  AAACAACTCTCAAGGCTCCTCACTTCTCAAATCCAAATTTCTCACTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTCTCAAGGCTCCTCACTTCTCAAATCCAAATTTCTCACTGTGG  150

seq1  TCTGAGCTAAGCCCCATTTGCCCATCCGCTCAGGCCTCTGCCTGCCTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTAAGCCCCATTTGCCCATCCGCTCAGGCCTCTGCCTGCCTCGT  200

seq1  GGTCCTTGTCTCCACCTGAGCCTCCAGACCTCAACCACAGTGAACTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGTCTCCACCTGAGCCTCCAGACCTCAACCACAGTGAACTTTTT  250

seq1  TCTATTCCCAAGACTTTAACAGATGGTGGGTTTTCCTGCCCAGAGTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCCAAGACTTTAACAGATGGTGGGTTTTCCTGCCCAGAGTGCTC  300

seq1  TTCTTCTCAACACCCCTTTGACACCAAATTTCTACGCATCTTTCAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCAACACCCCTTTGACACCAAATTTCTACGCATCTTTCAACTCT  350

seq1  CAGCTCATGGTTTGCTTCTCAGTAAACCCTCCCCTGACCCCTGATGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCATGGTTTGCTTCTCAGTAAACCCTCCCCTGACCCCTGATGGACA  400

seq1  CTTCTATGGCACTCTGACTGCCACGCACTCTGGTCGAGTCAGCTTGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGGCACTCTGACTGCCACGCACTCTGGTCGAGTCAGCTTGACAA  450

seq1  GCCAAGAGGCTTGGAAGCTACTCACTGAGGCAGAAGAGTTTCAAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGGCTTGGAAGCTACTCACTGAGGCAGAAGAGTTTCAAGGAAAC  500

seq1  TCACTCCTGGAGTCTGGCGTTCTCTCTAACCCATACATTAAT  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTGGAGTCTGGCGTTCTCTCTAACCCATACATTAAT  542