BAC Information

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BAC

Clone NameB6Ng01-267D06
Chromosome11 (Build37)
Map Location 26,233,707 - 26,234,827
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345
Downstream geneFancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267D06.bB6Ng01-267D06.g
ACCGA070397GA070398
length1,2341,138
definitionB6Ng01-267D06.b B6Ng01-267D06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatatattggatattagtcccctatcagatttaggattgg
taaaaatcctgttccaatctgttagtggcctttttgtcttattgacagtg
tcttttgccttataaaagctttgcaattttatgaggtctcatttgtagac
tcttgatcttactggaccagccattactgttctgttcaggaatttttatc
ctgtgcccatatctttgaggcttttcccaactttctcctctataagtttc
aggttctctggttttatgtggagttccttgatccacttagacttgagctg
tgtacaaggagataagaatggatcaattctaattcttctacatgataaac
accagttgtgtcagcaccatttgttggaaatgctgtcttttttccactgg
atggttttagctcccttgtcaaatatcaagtgaccataggtgtgtgggtt
catttctgggtcatcaattctattccattgatctacctgtctgtctctgt
accagtaccatgcagtttttatcacaattgctctgtggtacagctagagg
ttagacatggtgattcccccagaggttcttttatcgttgtcaatagtttt
tgctatcctatgttttttgttattccagatgaatttccaaattgctcttt
ctaactctgtgaagaattgagttggtaatttgatggggattgcagtaaat
ctgtagattgctttcagcaagatattcattttgactatattaatcctgcc
aaatccatgagcatgggagatctttccatcttctgagattttcttcgttt
ctttcttcagaggcttgaagttcttatcatatagatctgtcacttcctta
gttagaatcacaccagggtattttacattatttgtgactattgtgaaagg
gtgttgttccctaattttctttctcagccctgttttatccttttgtgtaa
agaaaaggccactgatttggtttgagttaattttgtatccagctactgca
ctgaagctgtttatcaaggtttaggagttctcttggtggaattttaaagg
tccactaataatatgttaacatgtcatctgcaagtagtaatatttgacct
tcttctttccacttgtatcccatgaccctctctttgttgcctaattgatc
ctggcctagggattcaagtacaataatggaatagaatggggagaatggtg
tcacgacccctggctctagacccccggattcctg
gaattcatacattaaaatttatgtgtgatatagacattgccttttgcttt
gatttatctttattaaaatatagttttaaattttatgtatccatctctgg
tctttctattcctattccattacatttagaaaatttagaaaattctagtt
gtttctggtaattacttttggcatactaaaggttcatttatattgtatat
aattttttcaataataaatgtattatccaccaattttttggtatatagaa
aattcccaaaagaaaacactttttggtaagtttttcctaaataataacat
atgcacactaacttatgaaaatgagaaggtagactgtcttcatggcatgt
tgggacagtgaactccacccctctctctcacctgttttcttacatccctg
ctcccatatttgtggatagattttgtttagggatagtaaatatatttgct
ggcatatactgcaaaatgagtaataaaatgaacctgatacatcacttact
aaacaattatattaaaaatgaattattgctgcttttatccccatttgatt
gagaaactttttaaaatgttaatctggtacacagtatagagtctatattc
gaactatcacagacttgcgtaattttgtaccgaaacgctagaattttaat
taattttgaattatatgtttatagttgtataaacagatattttggcccag
aattttaaaaatactttttagtaacatattattgcaaggaatgttaagaa
aaattagtctttgtggtgggctaagatttctcaagattttgaaattctga
gccgtgattttgttttgattttctaatatggacaaataatattatgataa
atatattagcataattgtgattccatcaatgtctttttggttctttaatt
tttttcccctttagctatttttgccatttttggctctgttacttggccct
ttattatcagttcccatgtgagattgggcctcgggtaggcccaaaaccca
gctatgtgagcccagtccacaggattcctgaggaagaagaggaaatcgtg
ggcctgaaaaccaaacgaatttatttggatgaggagaaaactgttagttg
ccaaagccttgcttagatgccaaagcctgtagaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26233707_26234827
seq2: B6Ng01-267D06.g_68_1205 (reverse)

seq1  TTTTTCCTACA-GCCTTGGCATCT-ACCAGGGCTTTTGGCACTTACAG-T  47
      ||||| ||||| || ||||||||| | || |||||| |  ||| |||| |
seq2  TTTTTTCTACAGGCTTTGGCATCTAAGCAAGGCTTTGGCAACTAACAGTT  50

seq1  TTCTCCTCAT-CAAATAA--TCGTTTTGGTTTTCA-GCCCACGATTT-CT  92
      |||||||||| |||||||  ||| ||||||||||| ||||||||||| ||
seq2  TTCTCCTCATCCAAATAAATTCG-TTTGGTTTTCAGGCCCACGATTTCCT  99

seq1  C-TCTTCCTCA-GAATCCTGTGGACT-GGCTC-CATAGCTGG--TTTTGG  136
      | ||||||||| |||||||||||||| ||||| |||||||||  ||| ||
seq2  CTTCTTCCTCAGGAATCCTGTGGACTGGGCTCACATAGCTGGGTTTTGGG  149

seq1  CCTACCCGAGG-CCAATCTTCACATGGGAACTGAT-ATAAAGGGCCAAGT  184
      ||||||||||| |||||| |||||||||||||||| ||||||||||||||
seq2  CCTACCCGAGGCCCAATC-TCACATGGGAACTGATAATAAAGGGCCAAGT  198

seq1  AACAGAGCCAAAAATGGC-AAAATAGCTAAAGGGG-AAAAAATTAAAGAA  232
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  AACAGAGCCAAAAATGGCAAAAATAGCTAAAGGGGAAAAAAATTAAAGAA  248

seq1  CCAAAAAGACATTGATGGAATCACAATTATGCTAATATATTTATCATAAT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGACATTGATGGAATCACAATTATGCTAATATATTTATCATAAT  298

seq1  ATTATTTGTCCATATTAGAAAATCAAAACAAAATCACGGCTCAGAATTTC  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGTCCATATTAGAAAATCAAAACAAAATCACGGCTCAGAATTTC  348

seq1  AAAATCTTGAGAAATCTTAGCCCACCACAAAGACTAATTTTTCTTAACAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGAGAAATCTTAGCCCACCACAAAGACTAATTTTTCTTAACAT  398

seq1  TCCTTGCAATAATATGTTACT-AAAAGTATTTTTAAAATTCTGGGCCAAA  431
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCTTGCAATAATATGTTACTAAAAAGTATTTTTAAAATTCTGGGCCAAA  448

seq1  ATATCTGTTTATACAACTATAAACATATAATTCAAAATTAATTAAAATTC  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTTTATACAACTATAAACATATAATTCAAAATTAATTAAAATTC  498

seq1  TAGCGTTTCGGTACAAAATTACGCAAGTCTGTGATAGTTCGAATATAGAC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTTTCGGTACAAAATTACGCAAGTCTGTGATAGTTCGAATATAGAC  548

seq1  TCTATACTGTGTACCAGATTAACATTTTAAAAAGTTTCTCAATCAAATGG  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACTGTGTACCAGATTAACATTTTAAAAAGTTTCTCAATCAAATGG  598

seq1  GGATAAAAGCAGCAATAATTCATTTTTAATATAATTGTTTAGTAAGTGAT  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAAGCAGCAATAATTCATTTTTAATATAATTGTTTAGTAAGTGAT  648

seq1  GTATCAGGTTCATTTTATTACTCATTTTGCAGTATATGCCAGCAAATATA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGGTTCATTTTATTACTCATTTTGCAGTATATGCCAGCAAATATA  698

seq1  TTTACTATCCCTAAACAAAATCTATCCACAAATATGGGAGCAGGGATGTA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATCCCTAAACAAAATCTATCCACAAATATGGGAGCAGGGATGTA  748

seq1  AGAAAACAGGTGAGAGAGAGGGGTGGAGTTCACTGTCCCAACATGCCATG  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGGTGAGAGAGAGGGGTGGAGTTCACTGTCCCAACATGCCATG  798

seq1  AAGACAGTCTACCTTCTCATTTTCATAAGTTAGTGTGCATATGTTATTAT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTCTACCTTCTCATTTTCATAAGTTAGTGTGCATATGTTATTAT  848

seq1  TTAGGAAAAACTTACCAAAAAGTGTTTTCTTTTGGGAATTTTCTATATAC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAAACTTACCAAAAAGTGTTTTCTTTTGGGAATTTTCTATATAC  898

seq1  CAAAAAATTGGTGGATAATACATTTATTATTGAAAAAATTATATACAATA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTGGTGGATAATACATTTATTATTGAAAAAATTATATACAATA  948

seq1  TAAATGAACCTTTAGTATGCCAAAAGTAATTACCAGAAACAACTAGAATT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAACCTTTAGTATGCCAAAAGTAATTACCAGAAACAACTAGAATT  998

seq1  TTCTAAATTTTCTAAATGTAATGGAATAGGAATAGAAAGACCAGAGATGG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTTTCTAAATGTAATGGAATAGGAATAGAAAGACCAGAGATGG  1048

seq1  ATACATAAAATTTAAAACTATATTTTAATAAAGATAAATCAAAGCAAAAG  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAAATTTAAAACTATATTTTAATAAAGATAAATCAAAGCAAAAG  1098

seq1  GCAATGTCTATATCACACATAAATTTTAATGTATGAATTC  1121
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTCTATATCACACATAAATTTTAATGTATGAATTC  1138