BAC Information

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BAC

Clone NameB6Ng01-267P03
Chromosome11 (Build37)
Map Location 9,802,122 - 9,803,272
singlet/doubletsinglet
Overlap genenone
Upstream genePkd1l1, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13, LOC665435
Downstream geneLOC382483
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267P03.bB6Ng01-267P03.g
ACCGA070936GA070937
length1,1421,167
definitionB6Ng01-267P03.b B6Ng01-267P03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgactattgttacatttttctcttcccacaatacatgcttg
ctggccattttagtctatgaatatttgctttttcattaagttgtagtaat
ttttagaatttgtatttttaggagcattatttgaattttgatttgtaagt
attttctccattgtttaggctttctttttgatcttttcataacatttctt
gattgtcaaaagttttaattttatgaagtttaattaattgatctttctac
tttgattgcatttggttttgttgtcaaatctgagatgcttttaatgagat
aaagatgaacccctaagtttttctttaattgtcttatgactttgtgtctt
atattagtgatttcttggagttaatttgacttgttctgatgattaaacac
cattgtcaatctcatctctcacaaagtaaaactcaaaacacacttggtac
tgtgttattgtttggactgaaatttctcacaccaagattttcacattgag
caaataggagtaggaatcattttccaagttagtaaaacaaacaaacaaca
gcaaaacaaacacaaacaaaaaaaaaacaaaaaaactcactcattttcat
ctttcatcttcccccaaccaggactaagtcattccaaggtacagtcataa
actcaggagtctatctttaagtcaagtgatatttatttaaacatttgttt
ggggagcaaataatcacaccccttaaaattctggctggtcttgggatgtt
atcattgttgaaaatgaatgccagaaagatcttttgctagagctgatctg
tcagccacacataaccatctacagaaccaaataaccctgaaccctctctt
cctaacaccatgctgtattcctgctcacctgcccatctgccgacctgccc
aaaaacattctgtgtatatcaaactggactaaaaggatcaacgtaatgat
gggcctaactgaaaaactaatagagaatagagattgttcaattttatgaa
aacttggtggaaatcaattgctagaatctagacacaaagacaaaatttta
taaatcatgtctagcctaatgctatagtgtcctatcagcattatatggct
gagaaagatgccatgaataacaacctctttttttccctcatt

gaattctcagctgaggaatactgaatggctgagaagcatctgaaaaaata
ttcaacatccttaatcatcagtgaaatgtaagtgaaaacaaccctgagat
tccacctcatatcagtcatactggctaatatcaaaaactcaggtgacagc
agatgctggtatgaatatggagaatgaggttcactcctccattgttggtg
ggattgcgagcttgtacaaccactctggaaatcagtctggcccttcctca
gaaaattggacatagtactactggaggattccgcaatacctctcctgggc
acatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcgtagcagccttatttataatagccagaagctggaaagaacccagat
gctcctcaacagaggaatggatacagaaaatatggtgcatttacacaatg
gagtactactcaacaattaaaaacaatgaatttatgaaattcttaggcaa
atcaatgtatctggaggatatcatcctgagtaaggtaatccaatctcaaa
tgaacacacatgatatgcactcactgataagtgggtattagccaggaaac
ttagaatatccaagatagaatttgcaaaacacatgaaactcaagaaggaa
gaccaaatcgtagatgcttagttccttcttagaatggggaacaaaatact
catggaatgagttacggagacaaagtttggagctgagatggaaggaaaga
ctgccctacctgtggatccatcccataaacaaccaccaaacccagacact
atttcatatgccagcaagtttttgctgacaggaccctgatatagctatct
cttgtgtggctatgccagtgcctggcaaacacagaagtggatgctcacag
tcatgtatttgatggatcatagggtccccaatgaagagctagagaaagta
cccaagaacctacaggtctgcaacctataggataataaaaacaatatgaa
ctaacagtatcctccagacctttttgttcttctaggtgcatatgtagcag
agatgcatagctgtcaatccatgcagagagcttgtcttgaaagattgatg
ctcagtacaggtatgcagtcagaatggaatggtagttggcgacgatagat
gggtggtaatctgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_9802122_9803272
seq2: B6Ng01-267P03.b_45_1186 (reverse)

seq1  AATGAGGGAAAAAAAGA-GTTGTTA-TCATGGCATCTCTTCTCAGCAATA  48
      ||||||||||||||||| ||||||| ||||||||||| |||||||| |||
seq2  AATGAGGGAAAAAAAGAGGTTGTTATTCATGGCATCT-TTCTCAGCCATA  49

seq1  TAATGCTGAATAAGACACTTATAGCCAATATAGGGCTAGACATGATTTTA  98
      |||||||| ||| ||||| ||||||    ||  |||||||||||||||  
seq2  TAATGCTG-ATAGGACAC-TATAGC----ATTAGGCTAGACATGATTT--  91

seq1  ATAAAATTTTGTCTTTTGTTGTCTAGATTCTAGCAATTGATTTCCACCAA  148
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  ATAAAATTTTGTCTTT--GTGTCTAGATTCTAGCAATTGATTTCCACCAA  139

seq1  GTTTTCATAAAATTGAACAATCTCTATTCTCTATTAGTTTTTCAGTTAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATAAAATTGAACAATCTCTATTCTCTATTAGTTTTTCAGTTAGG  189

seq1  CCCATCATTACGTTGATCCTTTTAGTCCAGTTTGATATACACAGAATGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCATTACGTTGATCCTTTTAGTCCAGTTTGATATACACAGAATGTT  239

seq1  TTTGGGCAGGTCGGCAGATGGGCAGGTGAGCAGGAATACAGCATGGTGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCAGGTCGGCAGATGGGCAGGTGAGCAGGAATACAGCATGGTGTT  289

seq1  AGGAAGAGAGGGTTCAGGGTTATTTGGTTCTGTAGATGGTTATGTGTGGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGAGGGTTCAGGGTTATTTGGTTCTGTAGATGGTTATGTGTGGC  339

seq1  TGACAGATCAGCTCTAGCAAAAGATCTTTCTGGCATTCATTTTCAACAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATCAGCTCTAGCAAAAGATCTTTCTGGCATTCATTTTCAACAAT  389

seq1  GATAACATCCCAAGACCAGCCAGAATTTTAAGGGGTGTGATTATTTGCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATCCCAAGACCAGCCAGAATTTTAAGGGGTGTGATTATTTGCTC  439

seq1  CCCAAACAAATGTTTAAATAAATATCACTTGACTTAAAGATAGACTCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAAATGTTTAAATAAATATCACTTGACTTAAAGATAGACTCCTG  489

seq1  AGTTTATGACTGTACCTTGGAATGACTTAGTCCTGGTTGGGGGAAGATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGACTGTACCTTGGAATGACTTAGTCCTGGTTGGGGGAAGATGA  539

seq1  AAGATGAAAATGAGTGAGTTTTTTTGTTTTTTTTTTGTTTGTGTTTGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAAATGAGTGAGTTTTTTTGTTTTTTTTTTGTTTGTGTTTGTTT  589

seq1  TGCTGTTGTTTGTTTGTTTTACTAACTTGGAAAATGATTCCTACTCCTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTTTGTTTGTTTTACTAACTTGGAAAATGATTCCTACTCCTAT  639

seq1  TTGCTCAATGTGAAAATCTTGGTGTGAGAAATTTCAGTCCAAACAATAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAATGTGAAAATCTTGGTGTGAGAAATTTCAGTCCAAACAATAAC  689

seq1  ACAGTACCAAGTGTGTTTTGAGTTTTACTTTGTGAGAGATGAGATTGACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACCAAGTGTGTTTTGAGTTTTACTTTGTGAGAGATGAGATTGACA  739

seq1  ATGGTGTTTAATCATCAGAACAAGTCAAATTAACTCCAAGAAATCACTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTTTAATCATCAGAACAAGTCAAATTAACTCCAAGAAATCACTAA  789

seq1  TATAAGACACAAAGTCATAAGACAATTAAAGAAAAACTTAGGGGTTCATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACACAAAGTCATAAGACAATTAAAGAAAAACTTAGGGGTTCATC  839

seq1  TTTATCTCATTAAAAGCATCTCAGATTTGACAACAAAACCAAATGCAATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCATTAAAAGCATCTCAGATTTGACAACAAAACCAAATGCAATC  889

seq1  AAAGTAGAAAGATCAATTAATTAAACTTCATAAAATTAAAACTTTTGACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAAGATCAATTAATTAAACTTCATAAAATTAAAACTTTTGACA  939

seq1  ATCAAGAAATGTTATGAAAAGATCAAAAAGAAAGCCTAAACAATGGAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAATGTTATGAAAAGATCAAAAAGAAAGCCTAAACAATGGAGAA  989

seq1  AATACTTACAAATCAAAATTCAAATAATGCTCCTAAAAATACAAATTCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTACAAATCAAAATTCAAATAATGCTCCTAAAAATACAAATTCTA  1039

seq1  AAAATTACTACAACTTAATGAAAAAGCAAATATTCATAGACTAAAATGGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACTACAACTTAATGAAAAAGCAAATATTCATAGACTAAAATGGC  1089

seq1  CAGCAAGCATGTATTGTGGGAAGAGAAAAATGTAACAATAGTCAGAAGAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCATGTATTGTGGGAAGAGAAAAATGTAACAATAGTCAGAAGAA  1139

seq1  TTC  1151
      |||
seq2  TTC  1142


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