BAC Information

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BAC

Clone NameB6Ng01-269B09
Chromosome11 (Build37)
Map Location 13,587,792 - 13,588,837
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627244
Downstream geneLOC432535, 1700046C09Rik, 1700054H16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269B09.bB6Ng01-269B09.g
ACCGA071775GA071776
length6141,047
definitionB6Ng01-269B09.b B6Ng01-269B09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttaaatgacagatttccttataaatattcctggatcaat
attttctcaaaaatcatcttacaggtgtgaaaaaaatcttcctgactgac
agtttacccactgccatgctgactagagggcatttacataattcaacaca
ttcagctattttttttctctcacatttaaaaaaaaaatatccagggatcc
atcccataattagcctctaaacgatgacaccattgcatacactagcaagc
gttggctgaaaggacccagatatagctgtctcttgtgagactaggccggg
gactagcaaacacataagtggatggtcacagtcagctatttggatggagc
acagggcccccaatggaggagctagagaaagtacccaaggagctaaaggg
atctgcaaccctataggtggaacaacagtatgaactaaccagtacccagg
agctcttgactctagctgcatatgtatcaaaaaatggcctagtcggccat
cactggaaagagaggcccattggacaggcaaactttatatgccccagtac
aggggaacgccagggccaaaaaaaaaaaaaaaaatgggaatgggtgggta
gggaagtgaggggg

gaattcaattaagtttgaggcaatctgattgcctgattaaaatattctta
ggaaggtgctaatttaaaaagatgagcttgtcaaaagatgtgacttaatt
tggtaagtatatttggaggtatttttgacctgcctagttgtatatataaa
ctcgaagatttaaaattgtgttctgtgactttcatgcaacccccagggag
tgaagtggcaaggttagtgtcaagaacatccaaaacttttagtgtactcc
ttttgttttcttatgttaactacaatattacaatattttataatctagtg
attatgacttgagaatgtttgcatttgaaaatgacagacataacaaataa
gaaaattaagtcaaggaaagaaagacaaatactagagaaggtaaagatgc
taatctcattgaattaaagagaaagttgcaccaaatacacagaacagcac
tgggcaaggaaagatgagaagtagaagttaatagatacaggatttggttg
acagattgacttcaaataacctatagcatagtagctatgtagaatttggt
tgggaaaataaacaccatgtctccaaattctcaaaagagaaaactacaaa
tgttatgaaaacaaagtgataagttttcaagtttgtgtttttttgtagtc
cccacaaaatgcctacacatagaaacatataaagtcgatatatctccact
taccagggtagaaaacatcccaccatagatataaaaataaagcatggcaa
tatttatcttatttgtttttttaagacatttcatactacttaagaatgtc
gattcccacctgccttcctgtacagatctatagggaaatggggctctttg
aaattagggtattatactttttcactatggtgagcaaccttacaaatatt
tagagaaaaattaatgtttaagcaactcatgcaagtgttcaggccttttc
cttcacaatatatttcttagtttgctttctacttctgtgataaaaacatt
gagcaaaccagctcagggagaaaatagtgtatatatatatatatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13587792_13588837
seq2: B6Ng01-269B09.g_66_1112

seq1  GAATTCAATTAAGTTTGAGGCAATCTGATTGCCTGATTAAAATATTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAAGTTTGAGGCAATCTGATTGCCTGATTAAAATATTCTTA  50

seq1  GGAAGGTGCTAATTTAAAAAGATGAGCTTGTCAAAAGATGTGACTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTGCTAATTTAAAAAGATGAGCTTGTCAAAAGATGTGACTTAATT  100

seq1  TGGTAAGTATATTTGGAGGTATTTTTGACCTGCCTAGTTGTATATATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGTATATTTGGAGGTATTTTTGACCTGCCTAGTTGTATATATAAA  150

seq1  CTCGAAGATTTAAAATTGTGTTCTGTGACTTTCATGCAACCCCCAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAGATTTAAAATTGTGTTCTGTGACTTTCATGCAACCCCCAGGGAG  200

seq1  TGAAGTGGCAAGGTTAGTGTCAAGAACATCCAAAACTTTTAGTGTACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGCAAGGTTAGTGTCAAGAACATCCAAAACTTTTAGTGTACTCC  250

seq1  TTTTGTTTTCTTATGTTAACTACAATATTACAATATTTTATAATCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTCTTATGTTAACTACAATATTACAATATTTTATAATCTAGTG  300

seq1  ATTATGACTTGAGAATGTTTGCATTTGAAAATGACAGACATAACAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGACTTGAGAATGTTTGCATTTGAAAATGACAGACATAACAAATAA  350

seq1  GAAAATTAAGTCAAGGAAAGAAAGACAAATACTAGAGAAGGTAAAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAAGTCAAGGAAAGAAAGACAAATACTAGAGAAGGTAAAGATGC  400

seq1  TAATCTCATTGAATTAAAGAGAAAGTTGCACCAAATACACAGAACAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCATTGAATTAAAGAGAAAGTTGCACCAAATACACAGAACAGCAC  450

seq1  TGGGCAAGGAAAGATGAGAAGTAGAAGTTAATAGATACAGGATTTGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGGAAAGATGAGAAGTAGAAGTTAATAGATACAGGATTTGGTTG  500

seq1  ACAGATTGACTTCAAATAACCTATAGCATAGTAGCTATGTAGAATTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTGACTTCAAATAACCTATAGCATAGTAGCTATGTAGAATTTGGT  550

seq1  TGGGAAAATAAACACCATGTCTCCAAATTCTCAAAAGAGAAAACTACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATAAACACCATGTCTCCAAATTCTCAAAAGAGAAAACTACAAA  600

seq1  TGTTATGAAAACAAAGTGATAAGTTTTCAAGTTTGTGTTTTTTTGTAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGAAAACAAAGTGATAAGTTTTCAAGTTTGTGTTTTTTTGTAGTC  650

seq1  CCCACAAAATGCCTACACATAGAAACATATAAAGTCGATATATCTCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAAATGCCTACACATAGAAACATATAAAGTCGATATATCTCCACT  700

seq1  TACCAGGGTAGAAAACATCCCACCATAGATATAAAAATAAAGCATGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGGTAGAAAACATCCCACCATAGATATAAAAATAAAGCATGGCAA  750

seq1  TATTTATCTTATTTGTTTTTTTAAGACATTTCATACTACTTAAGAATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTTATTTGTTTTTTTAAGACATTTCATACTACTTAAGAATGTC  800

seq1  GATTCCCACCTGCCTTCCTGTACAGATCTATAGGGAAATGGGGCTCTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCACCTGCCTTCCTGTACAGATCTATAGGGAAATGGGGCTCTTTG  850

seq1  AAATTAGGGTATTATACTTTTTCACTATGGTGAGCAACCTTACAAATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGGTATTATACTTTTTCACTATGGTGAGCAACCTTACAAATATT  900

seq1  TAGAGAAAAATTAATGTTTAAGCAACTCATGCAAGTGTTCAGGCCTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAAATTAATGTTTAAGCAACTCATGCAAGTGTTCAGGCCTTTTC  950

seq1  CTTCACAATATATTTCTTAGTTTGCTTTCTACTTCTGTGAT-AAAACATT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTTCACAATATATTTCTTAGTTTGCTTTCTACTTCTGTGATAAAAACATT  1000

seq1  GAGCAAAACCAGCTCAGGGAG-AAATAGTGTATATATATATATATGTG  1046
      |||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGC-AAACCAGCTCAGGGAGAAAATAGTGTATATATATATATATGTG  1047


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