BAC Information

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BAC

Clone NameB6Ng01-269N07
Chromosome11 (Build37)
Map Location 14,705,291 - 14,833,370
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
Downstream geneLOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269N07.bB6Ng01-269N07.g
ACCGA072325GA072326
length8581,115
definitionB6Ng01-269N07.b B6Ng01-269N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,705,291 - 14,706,053)(14,832,241 - 14,833,370)
sequence
gaattcctgtaaacctgcttcccaccttaatctgtaaaataagagagctg
atgttgggcagataaagggaaggtggggcagaaggtggggagagagaagg
agaaaatgaaagatggagaggatgaagaggaagaggaggaagaagaaaag
cagaacaggagcaaatggcttggagaaactgcaagttctaaggggtctca
cagaggtggaagatggtagtgtagcagtagatctgcccaatctaggtgca
cagcatatattcatgttaaatgagttgtgctttcattgccagggcatatt
tgggttggagatttgctgcaacaataaccctagtgttgttgactattttc
taggtgaaaagaagtaaagtttcttcagaaatgtggtttctgaaaggcta
cataggttcctgggaatggtcctatatccatgtgtttaagacagcactaa
agatattccctgagtttatcaagagcatatttgattataagggaaaaaat
gtggtgtggacacatggagaaattatagagaagaaacaggggattgattt
gtacaaaacacattatatatgtatatgaaatctcatataataaaataatt
taaaaggcaaaattaaaattaaagtaaaccttaattaaggtaattcttag
atggccagacaaggccatcagtttgggagatagatccacaggtaggcaac
agattcagagacagctacagctacagttttgggcaaaccacctgaagacc
aagctgctcatcgctacatcagtacagggatcttaggccagtccatcctg
ttctttggacaatgactcagtttctgggagactctcagtatctaggttag
ttgacact
gaattcagcccataatgatagaatgtcataggaataggtttcatggctga
gctttttcatcccttgtttaacctacataataggtgagaaaaagagggag
atataaatcatgcagaaatgggtttacatattattaaccactagatgaac
ctggatgcctacagggcccaggtggataccgtggcccctgggtgaggccc
agaggatgatgaggttggcttatataccactctaataatgtgagtctccg
tgtctgctggcatatcaactgacacaagatagaggatcctagcaaactaa
ccatcctcggattgggactggaatagagctatgattccttcctccgtctt
tatagaagtcccttctgttgctgataacctggtaccttcccatactgaca
gtaggataactggctactacagaactcatttgaatcccccattggtctaa
aggctgtataaaacctcttgatactgggtaatacagtagatacacaaatc
aatgttggttcctggagattgtttcccatgttgatgactctgaccgcctc
actcccttctggatccttgattccaaagtcttacagttactcaagttact
caatattacatctctatatatgcactatataagttttgctactgtaaaaa
aaccctaatatagataaaacagaaatagagtgataaatattttaactatc
tgtaatagactttccaatttaccaacatctataagtactgaagcatctct
ggctaccatagcctttcttggtaacttggagtgtattaaaagcccctgat
gggaactacattacaaactgagggagattcctttaattattcttattaaa
caattttgggaaagtaatttatgactctacataaaacttttgacacttta
tgggaaaaataaagaaaatgatgatgatgtagatgattactaatttgatt
gatctagcattctgggataactgataaagatgagcaatatgattatgagc
acttacaggcattcacattcagtgtagggaacattaacagtaataaaatg
actgactcagatccatacaatataagggcttcaaaggtgtggcctagaga
gtagcagaatcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14705291_14706053
seq2: B6Ng01-269N07.b_144_902

seq1  GAGAAAATGAAAGATGGAGAGGATGAAGAGGAAGAGGAGGAAGAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGAAAGATGGAGAGGATGAAGAGGAAGAGGAGGAAGAAGAAAA  50

seq1  GCAGAACAGGAGCAAATGGCTTGGAGAAACTGCAAGTTCTAAGGGGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACAGGAGCAAATGGCTTGGAGAAACTGCAAGTTCTAAGGGGTCTC  100

seq1  ACAGAGGTGGAAGATGGTAGTGTAGCAGTAGATCTGCCCAATCTAGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTGGAAGATGGTAGTGTAGCAGTAGATCTGCCCAATCTAGGTGC  150

seq1  ACAGCATATATTCATGTTAAATGAGTTGTGCTTTCATTGCCAGGGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATATATTCATGTTAAATGAGTTGTGCTTTCATTGCCAGGGCATAT  200

seq1  TTGGGTTGGAGATTTGCTGCAACAATAACCCTAGTGTTGTTGACTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGGAGATTTGCTGCAACAATAACCCTAGTGTTGTTGACTATTTT  250

seq1  CTAGGTGAAAAGAAGTAAAGTTTCTTCAGAAATGTGGTTTCTGAAAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGAAAAGAAGTAAAGTTTCTTCAGAAATGTGGTTTCTGAAAGGCT  300

seq1  ACATAGGTTCCTGGGAATGGTCCTATATCCATGTGTTTAAGACAGCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTTCCTGGGAATGGTCCTATATCCATGTGTTTAAGACAGCACTA  350

seq1  AAGATATTCCCTGAGTTTATCAAGAGCATATTTGATTATAAGGGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCCCTGAGTTTATCAAGAGCATATTTGATTATAAGGGAAAAAA  400

seq1  TGTGGTGTGGACACATGGAGAAATTATAGAGAAGAAACAGGGGATTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTGGACACATGGAGAAATTATAGAGAAGAAACAGGGGATTGATT  450

seq1  TGTACAAAACACATTATATATGTATATGAAATCTCATATAATAAAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAAACACATTATATATGTATATGAAATCTCATATAATAAAATAAT  500

seq1  TTAAAAGGCAAAATTAAAATTAAAGTAAACCTTAATTAAGGTAA-TCTTA  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTAAAAGGCAAAATTAAAATTAAAGTAAACCTTAATTAAGGTAATTCTTA  550

seq1  GATGGCCAGACAAGGCCATCAGTTTGGGAGATAAGATCCACAGGTAGGCA  599
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATGGCCAGACAAGGCCATCAGTTTGGGAGAT-AGATCCACAGGTAGGCA  599

seq1  ACAGATTCAGAGACAGCTACAGCTACAGTTTTTGGGCAAACCACCTGAAG  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAGATTCAGAGACAGCTACAGCTACAG-TTTTGGGCAAACCACCTGAAG  648

seq1  ACCAAGCAGCACATCTGCTACATAAGTACAGGGATCTTAGGTCCAGTCCA  699
      ||||||| || |||| ||||||| ||||||||||||||||| ||||||||
seq2  ACCAAGCTGCTCATC-GCTACATCAGTACAGGGATCTTAGG-CCAGTCCA  696

seq1  TCCTTGTTCTTTGGACAATGACTCAGTCTCTGGGAGACTCCAAGTATCTA  749
      ||| ||||||||||||||||||||||| ||||||||||||  ||||||||
seq2  TCC-TGTTCTTTGGACAATGACTCAGTTTCTGGGAGACTCTCAGTATCTA  745

seq1  GGTTAGTTGACACT  763
      ||||||||||||||
seq2  GGTTAGTTGACACT  759

seq1: chr11_14832241_14833370
seq2: B6Ng01-269N07.g_67_1181 (reverse)

seq1  TAAAGATTCTCTGCCTTCTCTTCTAGGCCACA-CTTTGGAGCCTTTATAT  49
      ||||||||||    || ||| ||||||||||| ||||| |||| ||||| 
seq2  TAAAGATTCT---GCTACTC-TCTAGGCCACACCTTTGAAGCCCTTATA-  45

seq1  TTTGTATGTATCTTGAGTCAGTCAATTTTATTACTGTTTATGGTTTCCCT  99
       ||||||| ||| |||||||||| |||||||||||||| |||  ||||||
seq2  -TTGTATGGATC-TGAGTCAGTC-ATTTTATTACTGTTAATG--TTCCCT  90

seq1  ACACTGGATTGTGAAATGCTGTAAGTTGCTTCATTAAATCATATTGCTCA  149
      ||||| || ||||||   ||||||| ||| ||||  ||||||||||||||
seq2  ACACT-GAATGTGAATGCCTGTAAG-TGC-TCAT--AATCATATTGCTCA  135

seq1  TCTTTTATCAGTTTATCCAGGAATGCTAAGATCAATC-AATTAGTTAATC  198
      || |||||||| ||||||  ||||||| ||||||||| |||||| |||||
seq2  TC-TTTATCAG-TTATCCCAGAATGCT-AGATCAATCAAATTAG-TAATC  181

seq1  ATCTACATCATCATCATTTTCTTTATTTTT-CCATAAAGTGTCAAAAGTT  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATCTACATCATCATCATTTTCTTTATTTTTCCCATAAAGTGTCAAAAGTT  231

seq1  TTATGTAGAGTCATAAATTACTTT-CCAAAATTGTTTAATAAGAATAATT  296
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTATGTAGAGTCATAAATTACTTTCCCAAAATTGTTTAATAAGAATAATT  281

seq1  AAAGGAATCTCCCTCAGTTTGTAATGTAGTTCCCATCAGGGGCTTTTAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATCTCCCTCAGTTTGTAATGTAGTTCCCATCAGGGGCTTTTAAT  331

seq1  ACACTCCAAGTTACCAAGAAAGGCTATGGTAGCCAGAGATGCTTCAGTAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCAAGTTACCAAGAAAGGCTATGGTAGCCAGAGATGCTTCAGTAC  381

seq1  TTATAGATGTTGGTAAATTGGAAAGTCTATTACAGATAGTTAAAATATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATGTTGGTAAATTGGAAAGTCTATTACAGATAGTTAAAATATTT  431

seq1  ATCACTCTATTTCTGTTTTATCTATATTAGGGTTTTTTTACAGTAGCAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTATTTCTGTTTTATCTATATTAGGGTTTTTTTACAGTAGCAAA  481

seq1  ACTTATATAGTGCATATATAGAGATGTAATATTGAGTAACTTGAGTAACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATAGTGCATATATAGAGATGTAATATTGAGTAACTTGAGTAACT  531

seq1  GTAAGACTTTGGAATCAAGGATCCAGAAGGGAGTGAGGCGGTCAGAGTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACTTTGGAATCAAGGATCCAGAAGGGAGTGAGGCGGTCAGAGTCA  581

seq1  TCAACATGGGAAACAATCTCCAGGAACCAACATTGATTTGTGTATCTACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGGGAAACAATCTCCAGGAACCAACATTGATTTGTGTATCTACT  631

seq1  GTATTACCCAGTATCAAGAGGTTTTATACAGCCTTTAGACCAATGGGGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACCCAGTATCAAGAGGTTTTATACAGCCTTTAGACCAATGGGGGA  681

seq1  TTCAAATGAGTTCTGTAGTAGCCAGTTATCCTACTGTCAGTATGGGAAGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGAGTTCTGTAGTAGCCAGTTATCCTACTGTCAGTATGGGAAGG  731

seq1  TACCAGGTTATCAGCAACAGAAGGGACTTCTATAAAGACGGAGGAAGGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGTTATCAGCAACAGAAGGGACTTCTATAAAGACGGAGGAAGGAA  781

seq1  TCATAGCTCTATTCCAGTCCCAATCCGAGGATGGTTAGTTTGCTAGGATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCTCTATTCCAGTCCCAATCCGAGGATGGTTAGTTTGCTAGGATC  831

seq1  CTCTATCTTGTGTCAGTTGATATGCCAGCAGACACGGAGACTCACATTAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTTGTGTCAGTTGATATGCCAGCAGACACGGAGACTCACATTAT  881

seq1  TAGAGTGGTATATAAGCCAACCTCATCATCCTCTGGGCCTCACCCAGGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGGTATATAAGCCAACCTCATCATCCTCTGGGCCTCACCCAGGGG  931

seq1  CCACGGTATCCACCTGGGCCCTGTAGGCATCCAGGTTCATCTAGTGGTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGTATCCACCTGGGCCCTGTAGGCATCCAGGTTCATCTAGTGGTTA  981

seq1  ATAATATGTAAACCCATTTCTGCATGATTTATATCTCCCTCTTTTTCTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTAAACCCATTTCTGCATGATTTATATCTCCCTCTTTTTCTCA  1031

seq1  CCTATTATGTAGGTTAAACAAGGGATGAAAAAGCTCAGCCATGAAACCTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATGTAGGTTAAACAAGGGATGAAAAAGCTCAGCCATGAAACCTA  1081

seq1  TTCCTATGACATTCTATCATTATGGGCTGAATTC  1130
      ||||||||||||||||||||||||||||||||||
seq2  TTCCTATGACATTCTATCATTATGGGCTGAATTC  1115