BAC Information

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BAC

Clone NameB6Ng01-272I06
Chromosome11 (Build37)
Map Location 62,385,367 - 62,386,177
singlet/doubletsinglet
Overlap genenone
Upstream geneEpn2, Grap, Slc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb
Downstream geneTrpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272I06.b
ACCGA074323
length811
definitionB6Ng01-272I06.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggccagccttagctacttagtgagacttcaaaacaacaacta
tgacaacaacatgtattaagcactcattgtgtctgataccatgctaagtg
ctccgtgtatgacccttaaagcaagcttatttcacagatgatgaggctga
aggtaagcaagtgtagaccacatgggtgggaagtgaggaaaaaaagattt
aaacccatagccacaccctggacacttgtgctttccaggagatgagcatg
cacttttgacatacccacagcttccaaggccgcttattaaccatgaaata
gtcagcacagctttaaatgtcaagtagggcacagggcatccctgttctcc
tgaagtaaaactggagaccatcaagggacaatgaaaagtgagcttttatt
ggctaaagatatggcttaccatctaaaaatgggaactgctcttgcaaccc
caagacatgggcacttcgcaattgcctgtaactctcacctgattccttct
tctggattctatgcactctaacatgcactgattcaaaccaaaacacagtc
acacacacatgattaaaaataaaaataagggggctggagagatggctcat
gggttaagagcactgactgcccttacagaaaacccacgtttgattcctgg
aacctacatgtaggctcacagatggtggtaactctaattcaaggtgatct
gacagtttctggtctctgcagggtccaaacatgccttcattcattcacac
aaaagaaaaatacatcagttgtctacctcaatacaaaattaaatggggtg
cctggagagat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62385367_62386177
seq2: B6Ng01-272I06.b_42_852 (reverse)

seq1  ATCTCTCCAGGCACCCCCTTTAATTTTTTATTTATTTAATTAATTTATTT  50
      ||||||||||||||||| ||||||||| |||| |  ||   || | || |
seq2  ATCTCTCCAGGCACCCCATTTAATTTTGTATTGAGGTAGACAACTGATGT  50

seq1  ATTTTTCTTTTGTGTGAATGAATGAACGCATGTCTGGAGCCTGCAGAGAC  100
      |||||||||||||||||||||||||| |||||| |||| |||||||||||
seq2  ATTTTTCTTTTGTGTGAATGAATGAAGGCATGTTTGGACCCTGCAGAGAC  100

seq1  CAGAAACTGTCAGATCACCTTGAATTAGAGTTACCACCATCTGTGAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTGTCAGATCACCTTGAATTAGAGTTACCACCATCTGTGAGCCT  150

seq1  ACATGTAGGTTCCAGGAATCAAACTTGGGTCTTCTGTAAGGGCAGTCAGT  200
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  ACATGTAGGTTCCAGGAATCAAACGTGGGTTTTCTGTAAGGGCAGTCAGT  200

seq1  GCTCTTAACCCCTGAGCCATCTCTCCAGCCCCCTTATTTTTATTTTTAAT  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAACCCATGAGCCATCTCTCCAGCCCCCTTATTTTTATTTTTAAT  250

seq1  CATGTGTCTGTGACTGTGTTTTGGTTTGAATCAGTGCATGTTAGAGTGCA  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTGTGACTGTGTTTTGGTTTGAATCAGTGCATGTTAGAGTGCA  300

seq1  TAGAATCCAGAAGAAGGAATCAGGTGAGAGTTACAGGCAATTGTGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGAATCCAGAAGAAGGAATCAGGTGAGAGTTACAGGCAATTGCGAAGTG  350

seq1  CCCATGTCTTGGGGTTGCAAGCGCAGTTCCCATTCTTAGCTGCTAAGCCA  400
      ||||||||||||||||||||| |||||||||||| |||| || |||||||
seq2  CCCATGTCTTGGGGTTGCAAGAGCAGTTCCCATTTTTAGATGGTAAGCCA  400

seq1  TCTCTTTAGCCAATAAAAGCTCACTTTTCATTGTCCCTTGATGGTCTCCA  450
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAGCCAATAAAAGCTCACTTTTCATTGTCCCTTGATGGTCTCCA  450

seq1  GTTTTACTTCAGGAGAACAGTGATGCCCTCTGCCCTACCTGACATTTAAA  500
      |||||||||||||||||||| |||||||| |||||||| |||||||||||
seq2  GTTTTACTTCAGGAGAACAGGGATGCCCTGTGCCCTACTTGACATTTAAA  500

seq1  GCTGTGCTGACTATTTCATGGTTAATAAGCGGCCTTGGAAGCTGTGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCTGACTATTTCATGGTTAATAAGCGGCCTTGGAAGCTGTGGGTA  550

seq1  TGTCAAAAGTGCATGCTCATCTCCTGGAAAGCACAAGTGTCCAGGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAAGTGCATGCTCATCTCCTGGAAAGCACAAGTGTCCAGGGTGTG  600

seq1  GCTCTGGGTTTAAATCTTTTCTTCCTCACTTCCCACCCATGTGGTCTACA  650
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTATGGGTTTAAATCTTTTTTTCCTCACTTCCCACCCATGTGGTCTACA  650

seq1  CTTGCCTACCTTCAGCCTCATCATCTGTGAAATAAGCTTGCTCTAAGGGT  700
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTGCTTACCTTCAGCCTCATCATCTGTGAAATAAGCTTGCTTTAAGGGT  700

seq1  CATACACGGAGCACTTAGCATGGTATCAGACACAATGAGTGCTTAATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACGGAGCACTTAGCATGGTATCAGACACAATGAGTGCTTAATACA  750

seq1  TGTTGTTGTTATTGTTGTTGTTTTGAAGTCTCACTATGTAGCTCTGGCTG  800
      ||||||||| || ||||||||||||||||||||||| ||||||  |||||
seq2  TGTTGTTGTCATAGTTGTTGTTTTGAAGTCTCACTAAGTAGCTAAGGCTG  800

seq1  GCCTGGAATTC  811
      ||| |||||||
seq2  GCCAGGAATTC  811