BAC Information

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BAC

Clone NameB6Ng01-273F17
Chromosome11 (Build37)
Map Location 92,597,892 - 92,750,766
singlet/doubletdoublet
Overlap geneLOC382545
Upstream genenone
Downstream geneLOC100039286, Car10, LOC629636, Utp18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273F17.bB6Ng01-273F17.g
ACCGA074951GA074952
length1,155980
definitionB6Ng01-273F17.b B6Ng01-273F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,749,604 - 92,750,766)(92,597,892 - 92,598,861)
sequence
gaattcagtcttctagttgacattttattatgataggaaaatatttcaaa
atttaaaaaaggaacttgaaatctatgccacttctagtcacagggacttt
gaataagacatactccgtcagaaaatgaaaatgagaaagctcacaaacag
gcttccaaaaaggccagaatagttggagtcacagaagcacttgcctaact
cagaatatggcgattgattttgtcaaatatctaaatataagccagacgca
tggtaaacttctgtcttatggcctgggtaggttagcatccgagtttcaac
ttgggcgtaacagaagtagaatcagctcatcattcataacttcttacaga
taactcagagagttactaagagacgagttgttagaagaatttgttccata
tgatagcacaactaatgtctcttggtatcccaaaacgttaaagttttatg
catttagagttcgttgagacttccagatttggggagaaaataatcaactg
cagctttaatgtattcataagcaattggaattgggattgttctgaggaat
acacaatgaaacaggagctagtgtgattgatggactgccggaacctctac
cagaaacatgctgtcaacattctatgagcatctatgtcttcttaaggaaa
aacttgcatcctttacagctggctagagggtgattcagtgctgttgacct
gtggtctgcagccacaagaggttgatgatgtccacatattctcttgccct
tataagtcgaagattaacaggttttattggtactgtcactgtttctgttt
ctcctggcctttttgttggtcgctgaatttatttcggtggaaattctcac
ttgagttcaagggagcacatttttccatgcagtgtgttgctgtttggagg
gcagagggtaaatgtaggaaagggcatgccaatctctatcaccagaatac
tccttaagaaaaaaatactaatttaatagtggcttcaacctagagatcag
agaaatgctgtccttactaaattagtcgaaagcacgtgttcttctctttt
tctagacagaattgggtagatggcttctttgtcgctgttaagatgtattt
catggtatgagtctctgttataggtactgttactctgaaaaaaaagtgtt
tccaa

gaattccttaatctggtagtttggggaggcaagtacaatggggagaaggg
tggcctgggaaagatgggcagagtcagcatgaatgaaataatcaatactt
ctcacacagaaatggagttccaactttagtagagctatttggggttataa
ataaaaatatccacacctcgtgttcactctctttatcaggtaaccccatc
attctatttcccaccataatcatacagcagaagggtgccaccagaagcag
agtggatgccaaccccatgcgtttgaaattcccagcttacagcattatga
tctcaataaatctctattctccataacttagccagtctcaagttttcaga
aacaaacaaaaaacaaacaacagaagaacttttttttttttgagataggg
tttctctctgtatagccccggatatcctggaactcactttgtagaccagg
ctgaccgcaaactcagaaatctgcctgcctctgccatcccaagtgctgcg
attaaacgtgtgcgccaccacgcccagcctgaagaacatttcttttgttg
atgttttcataattgtgtcctgaaaactgtataggcacgtgaaaaagcaa
aatctaaaccctaaaatacttagctattttcctgtaatgttgtatgccaa
ttatttcaacataattcaagcattctgtgaaaccagttttgatgactaca
taatgtcttttcatatacccacaccatttctctaattactacttaaatta
taagtgtttccatattatgagtgattctataataaaaatattatgaacaa
atacttaactgcagctgttaataggaaactccctaaaataaaccattttt
aaagtcaaagatgtgctttcattaaagcttttgtttctattggtaaatga
ctttctaaaaaagacatgcatttcacatacttaatagctatgctatgata
gatatagatgatgatgatagatagatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92749604_92750766
seq2: B6Ng01-273F17.b_46_1200 (reverse)

seq1  TTGGAAACACTTTTTTTCTCAGAAGTAACAGTA-CTATAAACAGAGACTC  49
      ||||||||||||||||| |||| |||||||||| |||| |||||||||||
seq2  TTGGAAACACTTTTTTT-TCAG-AGTAACAGTACCTAT-AACAGAGACTC  47

seq1  AATACCCATGAAATACATCTTAACAGCGAACAAAGAAGCCAATTCTACCC  99
       ||| ||||||||||||||||||||||| ||||||||||||  |||||||
seq2  -ATA-CCATGAAATACATCTTAACAGCG-ACAAAGAAGCCA--TCTACCC  92

seq1  AATTCTGTCTAGAAAAAGAGAAG-ACACGGTGCTTTCCGACTAATTTAGT  148
      ||||||||||||||||||||||| |||| ||||||| |||||||||||||
seq2  AATTCTGTCTAGAAAAAGAGAAGAACAC-GTGCTTT-CGACTAATTTAGT  140

seq1  AAGGACAGCATTTCTCTGATCTCTAGGTTGAAGCCACTATTAAATTAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGCATTTCTCTGATCTCTAGGTTGAAGCCACTATTAAATTAGTA  190

seq1  TTTTTTTCTTAAGGAGTATTCTGGTGATAGAGATTGGCATGCCCTTTCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTAAGGAGTATTCTGGTGATAGAGATTGGCATGCCCTTTCCT  240

seq1  ACATTTACCCTCTGCCCTCCAAACAGCAACACACTGCATGGAAAAATGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACCCTCTGCCCTCCAAACAGCAACACACTGCATGGAAAAATGTG  290

seq1  CTCCCTTGAACTCAAGTGAGAATTTCCACCGAAATAAATTCAGCGACCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGAACTCAAGTGAGAATTTCCACCGAAATAAATTCAGCGACCAA  340

seq1  CAAAAAGGCCAGGAGAAACAGAAACAGTGACAGTACCAATAAAACCTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGCCAGGAGAAACAGAAACAGTGACAGTACCAATAAAACCTGTT  390

seq1  AATCTTCGACTTATAAGGGCAAGAGAATATGTGGACATCATCAACCTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCGACTTATAAGGGCAAGAGAATATGTGGACATCATCAACCTCTT  440

seq1  GTGGCTGCAGACCACAGGTCAACAGCACTGAATCACCCTCTAGCCAGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCAGACCACAGGTCAACAGCACTGAATCACCCTCTAGCCAGCTG  490

seq1  TAAAGGATGCAAGTTTTTCCTTAAGAAGACATAGATGCTCATAGAATGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATGCAAGTTTTTCCTTAAGAAGACATAGATGCTCATAGAATGTT  540

seq1  GACAGCATGTTTCTGGTAGAGGTTCCGGCAGTCCATCAATCACACTAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCATGTTTCTGGTAGAGGTTCCGGCAGTCCATCAATCACACTAGCT  590

seq1  CCTGTTTCATTGTGTATTCCTCAGAACAATCCCAATTCCAATTGCTTATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCATTGTGTATTCCTCAGAACAATCCCAATTCCAATTGCTTATG  640

seq1  AATACATTAAAGCTGCAGTTGATTATTTTCTCCCCAAATCTGGAAGTCTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTAAAGCTGCAGTTGATTATTTTCTCCCCAAATCTGGAAGTCTC  690

seq1  AACGAACTCTAAATGCATAAAACTTTAACGTTTTGGGATACCAAGAGACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAACTCTAAATGCATAAAACTTTAACGTTTTGGGATACCAAGAGACA  740

seq1  TTAGTTGTGCTATCATATGGAACAAATTCTTCTAACAACTCGTCTCTTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGTGCTATCATATGGAACAAATTCTTCTAACAACTCGTCTCTTAG  790

seq1  TAACTCTCTGAGTTATCTGTAAGAAGTTATGAATGATGAGCTGATTCTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCTGAGTTATCTGTAAGAAGTTATGAATGATGAGCTGATTCTAC  840

seq1  TTCTGTTACGCCCAAGTTGAAACTCGGATGCTAACCTACCCAGGCCATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTACGCCCAAGTTGAAACTCGGATGCTAACCTACCCAGGCCATAA  890

seq1  GACAGAAGTTTACCATGCGTCTGGCTTATATTTAGATATTTGACAAAATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGTTTACCATGCGTCTGGCTTATATTTAGATATTTGACAAAATC  940

seq1  AATCGCCATATTCTGAGTTAGGCAAGTGCTTCTGTGACTCCAACTATTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCCATATTCTGAGTTAGGCAAGTGCTTCTGTGACTCCAACTATTCT  990

seq1  GGCCTTTTTGGAAGCCTGTTTGTGAGCTTTCTCATTTTCATTTTCTGACG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTTTGGAAGCCTGTTTGTGAGCTTTCTCATTTTCATTTTCTGACG  1040

seq1  GAGTATGTCTTATTCAAAGTCCCTGTGACTAGAAGTGGCATAGATTTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGTCTTATTCAAAGTCCCTGTGACTAGAAGTGGCATAGATTTCAA  1090

seq1  GTTCCTTTTTTAAATTTTGAAATATTTTCCTATCATAATAAAATGTCAAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTTTTAAATTTTGAAATATTTTCCTATCATAATAAAATGTCAAC  1140

seq1  TAGAAGACTGAATTC  1163
      |||||||||||||||
seq2  TAGAAGACTGAATTC  1155


seq1: chr11_92597892_92598861
seq2: B6Ng01-273F17.g_64_1043

seq1  GAATTCCTTAATCTGGTAGTTTGGGGAGGCAAGTACAATGGGGAGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAATCTGGTAGTTTGGGGAGGCAAGTACAATGGGGAGAAGGG  50

seq1  TGGCCTGGGAAAGATGGGCAGAGTCAGCATGAATGAAATAATCAATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGGGAAAGATGGGCAGAGTCAGCATGAATGAAATAATCAATACTT  100

seq1  CTCACACAGAAATGGAGTTCCAACTTTAGTAGAGCTATTTGGGGTTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACAGAAATGGAGTTCCAACTTTAGTAGAGCTATTTGGGGTTATAA  150

seq1  ATAAAAATATCCACACCTCGTGTTCACTCTCTTTATCAGGTAACCCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATATCCACACCTCGTGTTCACTCTCTTTATCAGGTAACCCCATC  200

seq1  ATTCTATTTCCCACCATAATCATACAGCAGAAGGGTGCCACCAGAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTCCCACCATAATCATACAGCAGAAGGGTGCCACCAGAAGCAG  250

seq1  AGTGGATGCCAACCCCATGCGTTTGAAATTCCCAGCTTACAGCATTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATGCCAACCCCATGCGTTTGAAATTCCCAGCTTACAGCATTATGA  300

seq1  TCTCAATAAATCTCTATTCTCCATAACTTAGCCAGTCTCAAGTTTTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATAAATCTCTATTCTCCATAACTTAGCCAGTCTCAAGTTTTCAGA  350

seq1  AACAAACAAAAAACAAACAACAGAAGAACTTTTTTTTTTTTGAGATAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAAAAACAAACAACAGAAGAACTTTTTTTTTTTTGAGATAGGG  400

seq1  TTTCTCTCTGTATAGCCCCGGATATCCTGGAACTCACTTTGTAGACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTGTATAGCCCCGGATATCCTGGAACTCACTTTGTAGACCAGG  450

seq1  CTGACCGCAAACTCAGAAATCTGCCTGCCTCTGCCATCCCAAGTGCTGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCGCAAACTCAGAAATCTGCCTGCCTCTGCCATCCCAAGTGCTGCG  500

seq1  ATTAAACGTGTGCGCCACCACGCCCAGCCTGAAGAACATTTCTTTTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACGTGTGCGCCACCACGCCCAGCCTGAAGAACATTTCTTTTGTTG  550

seq1  ATGTTTTCATAATTGTGTCCTGAAAACTGTATAGGCACGTGAAAAAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCATAATTGTGTCCTGAAAACTGTATAGGCACGTGAAAAAGCAA  600

seq1  AATCTAAACCCTAAAATACTTAGCTATTTTCCTGTAATGTTGTATGCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAACCCTAAAATACTTAGCTATTTTCCTGTAATGTTGTATGCCAA  650

seq1  TTATTTCAACATAATTCAAGCATTCTGTGAAACCAGTTTTGATGACTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCAACATAATTCAAGCATTCTGTGAAACCAGTTTTGATGACTACA  700

seq1  TAATGTCTTTTCATATACCCACACCATTTCTCTAATTACTACTTAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTTTTCATATACCCACACCATTTCTCTAATTACTACTTAAATTA  750

seq1  TAAGTGTTTCCATATTATGAGTGATTCTATAATAAAAATATTATGAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTTCCATATTATGAGTGATTCTATAATAAAAATATTATGAACAA  800

seq1  ATACTTAACTGCAGCTGTTAATAGGAAACTCCCTAAAATAAACCATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAACTGCAGCTGTTAATAGGAAACTCCCTAAAATAAACCATTTTT  850

seq1  AAAGTCAAAGATGTGCTTTCATTAAAGCTTTTGTTTCTATTGGTAAATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAAGATGTGCTTTCATTAAAGCTTTTGTTTCTATTGGTAAATGA  900

seq1  CTTTCTAAAAAAGACATGCATTTCACATACTTAATAGCTATGC-------  943
      |||||||||||||||||||||||||||||||||||||||||||       
seq2  CTTTCTAAAAAAGACATGCATTTCACATACTTAATAGCTATGCTATGATA  950

seq1  -ATATAGAT--AGATAATAGATAGATAGAT  970
       ||||||||   ||| ||||||||||||||
seq2  GATATAGATGATGATGATAGATAGATAGAT  980


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