BAC Information

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BAC

Clone NameB6Ng01-274G21
Chromosome11 (Build37)
Map Location 39,782,848 - 39,783,838
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274G21.bB6Ng01-274G21.g
ACCGA075734GA075735
length995903
definitionB6Ng01-274G21.b B6Ng01-274G21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatacattatactttgatcacattcattcctgactcctccctct
aactctttctaactctatttcccaccttctcatctccaaactttttttcc
tcttttaattttttaaataacccattgagtctaatttgtgatgccaagat
actcatgagtgtgaccccatacattggaacatgtttgaactgcctggggc
cataacactgaataaaactgactttccaaacccagaagctattgactgtc
tgtggatctccagttagggtgggggttggtgcagacctctacctgatgtt
aaaatggggactggcctgaccttgtgttggtctttcatagaccacaggtg
ctgtatgctcatgattgcaatggtcctgtcatgttgcagagataatgttt
cattctagtcctttccatcttcctggattttacattctttcatatgcttt
tttttgtcataatccttgaagtgtcagaggcaaattttattgtatggaaa
actgataaacaaaggacgtttaaaggctggagtaaggatagggtttgagg
tattgagataggaggggctaggaagtggttaagtaaaactgtccctatat
gtgaaagacagagggagacttactaggctgtaagctaattacaaaatgta
ctatcttaaaagaagagtggtaacagaggtcacctgtatgagtaggcagt
gttatgcccagaagcgaaaagtctcagtgctatacttgcttccatgcctt
ggttagggagactccaatggtcaccaaagcagtgctgcctgttactgtta
ttgttagttgaatcaccaccataactacatgggtctattgatgaaagaca
tggcttttgtggtcatcaaataaaggagcaatccatctaggaccactgaa
acttgaacctcctcctgggctgcatagctatattaatttctgctactcca
tggtatcacacgacactcaacgggtacctgctagatccctatggc

gaattcaaattttttcaacagaggaatggatacagaaattgtggtaccgt
tttacaatggagtactacacagctattaaaaacaatgaatttatgaaatt
cttaggcaaatggaaggatctataggatatcatcctaagtgaggtaacat
aagaacacacatgataagtggaagcaaatggaaggatctataggatatca
tcctaagtgaggtaacataagaacacacacatgatatgcaatcactgata
agtggatattagcccagaaacttagaatacccaagacacaatttgcaaaa
tacatgaaactcaagaaaatggaagaccaaagtgtggacacttcgatcct
tcttagaagggagagcagaatacccatagaaggagttacagagacaaact
tctgagcagagactgaaggcatgaccatccagagactgctccacccacgg
atccatcccataaataccaccaaacctagagactattgcagatgccaaca
ggagcttgctgataagaccctgatatagctgtcttctgagaggctctgtc
agtgcctgacaagcgcagaagtggatgctcacagccatcctttggacaca
gggtccccaatgaaggtgctagagaaagtactcaaggagctgaaggggtt
ttgcagccccctaggaggactacaatatgaactaaccagtaacaatagag
ctccccgggacaaaaccaccaatcaaataaagcacacagagagactcatg
gctctagctgcatatatagctgacaatggcctagtcggtcatcaatggga
ggagaggccctgggtcctgtgatggttctatgccccagtataggggaatg
cctgggccaggaagcaggagtgggtaggttggggagcaaggggaaagggg
gga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_39782848_39783838
seq2: B6Ng01-274G21.b_42_1036 (reverse)

seq1  GCCATATGTGATCTAGCAGGTACACGGTGAGTGTCGTGTGATACCATGGA  50
      |||||| | |||||||||||||| || |||||||||||||||||||||| 
seq2  GCCATA-GGGATCTAGCAGGTACCCGTTGAGTGTCGTGTGATACCATGG-  48

seq1  AGTAGCAG-AATTTATATAGCTATGCAG-CCAGGAGGAAGTTTCAAGTTT  98
      |||||||| |||| |||||||||||||| |||||||| || |||||||||
seq2  AGTAGCAGAAATTAATATAGCTATGCAGCCCAGGAGG-AGGTTCAAGTTT  97

seq1  CAGTTGGTCCAAGATGGATTGCT-CTTTATCTGATGACCAC-AAAGCCAT  146
      ||| |||||| |||||||||||| |||||| |||||||||| ||||||||
seq2  CAG-TGGTCCTAGATGGATTGCTCCTTTATTTGATGACCACAAAAGCCAT  146

seq1  GTC-TTCATCAATAGA-CCATGTAGTTATGGTGGTGA-TCAACTAACAAT  193
      ||| |||||||||||| |||||||||||||||||||| ||||||||||||
seq2  GTCTTTCATCAATAGACCCATGTAGTTATGGTGGTGATTCAACTAACAAT  196

seq1  AACAGTAACAGGCAGCACTGCTTTGGTGACCATTGGAGTCTCCCTAACCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAACAGGCAGCACTGCTTTGGTGACCATTGGAGTCTCCCTAACCA  246

seq1  AGGCATGGAAGCAAGTATAGCACTGAGAC-TTTCGCTTCTGGGCATAACA  292
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGCATGGAAGCAAGTATAGCACTGAGACTTTTCGCTTCTGGGCATAACA  296

seq1  CTGCCTACTCATACAGGTGACCTCTGTTACCACTCTTCTTTTAAGATAGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACTCATACAGGTGACCTCTGTTACCACTCTTCTTTTAAGATAGT  346

seq1  ACATTTTGTAATTAGCTTACAGCCTAGTAAGTCTCCCTCTGTCTTTCACA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGTAATTAGCTTACAGCCTAGTAAGTCTCCCTCTGTCTTTCACA  396

seq1  TATAGGGACAGTTTTACTTAACCACTTCCTAGCCCCTCCTATCTCAATAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGACAGTTTTACTTAACCACTTCCTAGCCCCTCCTATCTCAATAC  446

seq1  CTCAAACCCTATCCTTACTCCAGCCTTTAAACGTCCTTTGTTTATCAGTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCCTATCCTTACTCCAGCCTTTAAACGTCCTTTGTTTATCAGTT  496

seq1  TTCCATACAATAAAATTTGCCTCTGACACTTCAAGGATTATGACAAAAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACAATAAAATTTGCCTCTGACACTTCAAGGATTATGACAAAAAA  546

seq1  AAGCATATGAAAGAATGTAAAATCCAGGAAGATGGAAAGGACTAGAATGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATGAAAGAATGTAAAATCCAGGAAGATGGAAAGGACTAGAATGA  596

seq1  AACATTATCTCTGCAACATGACAGGACCATTGCAATCATGAGCATACAGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATCTCTGCAACATGACAGGACCATTGCAATCATGAGCATACAGC  646

seq1  ACCTGTGGTCTATGAAAGACCAACACAAGGTCAGGCCAGTCCCCATTTTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGGTCTATGAAAGACCAACACAAGGTCAGGCCAGTCCCCATTTTA  696

seq1  ACATCAGGTAGAGGTCTGCACCAACCCCCACCCTAACTGGAGATCCACAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGGTAGAGGTCTGCACCAACCCCCACCCTAACTGGAGATCCACAG  746

seq1  ACAGTCAATAGCTTCTGGGTTTGGAAAGTCAGTTTTATTCAGTGTTATGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAATAGCTTCTGGGTTTGGAAAGTCAGTTTTATTCAGTGTTATGG  796

seq1  CCCCAGGCAGTTCAAACATGTTCCAATGTATGGGGTCACACTCATGAGTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCAGTTCAAACATGTTCCAATGTATGGGGTCACACTCATGAGTA  846

seq1  TCTTGGCATCACAAATTAGACTCAATGGGTTATTTAAAAAATTAAAAGAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCATCACAAATTAGACTCAATGGGTTATTTAAAAAATTAAAAGAG  896

seq1  GAAAAAAAGTTTGGAGATGAGAAGGTGGGAAATAGAGTTAGAAAGAGTTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAGTTTGGAGATGAGAAGGTGGGAAATAGAGTTAGAAAGAGTTA  946

seq1  GAGGGAGGAGTCAGGAATGAATGTGATCAAAGTATAATGTATGGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGAGTCAGGAATGAATGTGATCAAAGTATAATGTATGGAATTC  995


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