BAC Information

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BAC

Clone NameB6Ng01-274I16
Chromosome11 (Build37)
Map Location 14,705,291 - 14,845,195
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
Downstream geneLOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274I16.bB6Ng01-274I16.g
ACCGA075816GA075817
length1,140483
definitionB6Ng01-274I16.b B6Ng01-274I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,705,291 - 14,706,341)(14,844,707 - 14,845,195)
sequence
gaattcctgtaaacctgcttcccaccttaatctgtaaaataagagagctg
atgttgggcagataaagggaaggtggggcagaaggtggggagagagaagg
agaaaatgaaagatggagaggatgaagaggaagaggaggaagaagaaaag
cagaacaggagcaaatggcttggagaaactgcaagttctaaggggtctca
cagaggtggaagatggtagtgtagcagtagatctgcccaatctaggtgca
cagcatatattcatgttaaatgagttgtgctttcattgccagggcatatt
tgggttggagatttgctgcaacaataaccctagtgttgttgactattttc
taggtgaaaagaagtaaagtttcttcagaaatgtggtttctgaaaggcta
cataggttcctgggaatggtcctatatccatgtgtttaagacagcactaa
agatattccctgagtttatcaagagcatatttgattataagggaaaaaat
gtggtgtggacacatggagaaattatagagaagaaacaggggattgattt
gtacaaaacacattatatatgtatatgaaatctcatataataaaataatt
taaaaggcaaaattaaaattaaagtaaaccttaattaaggtaatcttaga
tggccagacaaggccatcagtttgggagataagatccacaggtaggcaac
agattcagagacagctacagctacagtttttgggcaaaccacctgaagac
caagcagcacatctgctacataagtacagggatcttaggtccagtccatc
cttgttctttggacaatgactcagtctctgggagactccaagtatctagg
ttagttgacacttttggtctacttttggagtcctcatttcccttcaggtc
cctcaattcttcctagaactcttccacaagacacccccaagttccaccta
aaggtgagctataggtctctgcatctgttactctcagaggtggaactctc
agtagacagttatgctaggaaacctgtctgcaagctggagcttatgtttt
tcaaggacctactaatagtttcttaaatctttcattctttctacagctgg
aaaaagagtagaaatgctacagcacaaaggttagtagaac

ttagggacaggtccaattttccttgtcaggatatttccaagcaaccattt
ataatccagcaaataaaaaagcagaagcagggacgggtagcatcagggga
agcagcagtcattacagactctcaggacactggcaatctcgtatccattc
gagagttaccagaattccaaaaataaactatcttgagctggcacaaatat
gcctgccagggaatgagacaaattatagttagctgctcaggaaaatcgga
aacagtcccacatcacacatctgggattaaaacaaaaaagcatattccca
tagcataactgtgtattttacaaaaccatcactacaaattagagatcatt
acaatttcaaaagcctcttgtaacaccttaagtcttttatgaataaaagt
gtgtgtatgtgtgtgtgtgtgggggggggtgcgcgcgcatgtgcactcgt
gtgcacgtgtgactggggagcatgtatgtgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14705291_14706341
seq2: B6Ng01-274I16.b_142_1182

seq1  GAGAAAATGAAAGATGGAGAGGATGAAGAGGAAGAGGAGGAAGAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGAAAGATGGAGAGGATGAAGAGGAAGAGGAGGAAGAAGAAAA  50

seq1  GCAGAACAGGAGCAAATGGCTTGGAGAAACTGCAAGTTCTAAGGGGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACAGGAGCAAATGGCTTGGAGAAACTGCAAGTTCTAAGGGGTCTC  100

seq1  ACAGAGGTGGAAGATGGTAGTGTAGCAGTAGATCTGCCCAATCTAGGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTGGAAGATGGTAGTGTAGCAGTAGATCTGCCCAATCTAGGTGC  150

seq1  ACAGCATATATTCATGTTAAATGAGTTGTGCTTTCATTGCCAGGGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATATATTCATGTTAAATGAGTTGTGCTTTCATTGCCAGGGCATAT  200

seq1  TTGGGTTGGAGATTTGCTGCAACAATAACCCTAGTGTTGTTGACTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTGGAGATTTGCTGCAACAATAACCCTAGTGTTGTTGACTATTTT  250

seq1  CTAGGTGAAAAGAAGTAAAGTTTCTTCAGAAATGTGGTTTCTGAAAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGAAAAGAAGTAAAGTTTCTTCAGAAATGTGGTTTCTGAAAGGCT  300

seq1  ACATAGGTTCCTGGGAATGGTCCTATATCCATGTGTTTAAGACAGCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTTCCTGGGAATGGTCCTATATCCATGTGTTTAAGACAGCACTA  350

seq1  AAGATATTCCCTGAGTTTATCAAGAGCATATTTGATTATAAGGGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCCCTGAGTTTATCAAGAGCATATTTGATTATAAGGGAAAAAA  400

seq1  TGTGGTGTGGACACATGGAGAAATTATAGAGAAGAAACAGGGGATTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTGGACACATGGAGAAATTATAGAGAAGAAACAGGGGATTGATT  450

seq1  TGTACAAAACACATTATATATGTATATGAAATCTCATATAATAAAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAAACACATTATATATGTATATGAAATCTCATATAATAAAATAAT  500

seq1  TTAAAAGGCAAAATTAAAATTAAAGTAAACCTTAATTAAGGTAATCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGCAAAATTAAAATTAAAGTAAACCTTAATTAAGGTAATCTTAG  550

seq1  ATGGCCAGACAAGGCCATCAGTTTGGGAGATAAGATCCACAGGTAGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAGACAAGGCCATCAGTTTGGGAGATAAGATCCACAGGTAGGCAA  600

seq1  CAGATTCAGAGACAGCTACAGCTACAGTTTTTGGGCAAACCACCTGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCAGAGACAGCTACAGCTACAGTTTTTGGGCAAACCACCTGAAGA  650

seq1  CCAAGCAGCACATCTGCTACATAAGTACAGGGATCTTAGGTCCAGTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGCACATCTGCTACATAAGTACAGGGATCTTAGGTCCAGTCCAT  700

seq1  CCTTGTTCTTTGGACAATGACTCAGTCTCTGGGAGACTCCAAGTATCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTTTGGACAATGACTCAGTCTCTGGGAGACTCCAAGTATCTAG  750

seq1  GTTAGTTGACACTTTTGGTCTACTTTTGGAGTCCTCA-TTCCCTTCAGGT  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTAGTTGACACTTTTGGTCTACTTTTGGAGTCCTCATTTCCCTTCAGGT  800

seq1  CCCTCAATTCTTCCTAGAACTCTTCCACAAGACA-CCCCAAGTTCCACCT  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCCTCAATTCTTCCTAGAACTCTTCCACAAGACACCCCCAAGTTCCACCT  850

seq1  AAAGGTGAGCTATAGGTCTCTGCATCTGTTACTCTCAGAGGTGGAACTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAGCTATAGGTCTCTGCATCTGTTACTCTCAGAGGTGGAACTCT  900

seq1  CAGTAGACAGTTATGCTAGG-AACCTGTCTGCAAGCTGGAGGCTTATG-T  946
      |||||||||||||||||||| ||||||||||||||||||| ||||||| |
seq2  CAGTAGACAGTTATGCTAGGAAACCTGTCTGCAAGCTGGA-GCTTATGTT  949

seq1  TTTCAA-GACCTACCTTAATAAGGTTTCTTAAATTCTTCATCTTTTCTTA  995
      |||||| |||||||  |||||  |||||||||||  |||||  |||| ||
seq2  TTTCAAGGACCTAC--TAATA--GTTTCTTAAATCTTTCATTCTTTC-TA  994

seq1  CAGCTGAAAAAAGGAAGGAAGGAAAAATGGTTAACAGCACAAAAGTAATG  1045
      |||||| ||||||      || | ||||| |  |||||||||| || | |
seq2  CAGCTGGAAAAAG------AGTAGAAATGCT--ACAGCACAAAGGTTA-G  1035

seq1  TAGAAC  1051
      ||||||
seq2  TAGAAC  1041


seq1: chr11_14844707_14845195
seq2: B6Ng01-274I16.g_64_552 (reverse)

seq1  GCACACATACATGCACACCAGGCACACGAGCACACGGGTGCACATGCGCG  50
      |||||||||||||| | |||| |||||| ||||||| |||||||||||||
seq2  GCACACATACATGCTCCCCAGTCACACGTGCACACGAGTGCACATGCGCG  50

seq1  CGCACCCCCCCCCACACACACACACATACACACACTTTTATTCATAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCCCCCCCCACACACACACACATACACACACTTTTATTCATAAAAG  100

seq1  ACTTAAGGTGTTACAAGAGGCTTTTGAAATTGTAATGATCTCTAATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGTGTTACAAGAGGCTTTTGAAATTGTAATGATCTCTAATTTGT  150

seq1  AGTGATGGTTTTGTAAAATACACAGTTATGCTATGGGAATATGCTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGTTTTGTAAAATACACAGTTATGCTATGGGAATATGCTTTTTT  200

seq1  GTTTTAATCCCAGATGTGTGATGTGGGACTGTTTCCGATTTTCCTGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATCCCAGATGTGTGATGTGGGACTGTTTCCGATTTTCCTGAGCA  250

seq1  GCTAACTATAATTTGTCTCATTCCCTGGCAGGCATATTTGTGCCAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTATAATTTGTCTCATTCCCTGGCAGGCATATTTGTGCCAGCTCA  300

seq1  AGATAGTTTATTTTTGGAATTCTGGTAACTCTCGAATGGATACGAGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTTTATTTTTGGAATTCTGGTAACTCTCGAATGGATACGAGATTG  350

seq1  CCAGTGTCCTGAGAGTCTGTAATGACTGCTGCTTCCCCTGATGCTACCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTCCTGAGAGTCTGTAATGACTGCTGCTTCCCCTGATGCTACCCG  400

seq1  TCCCTGCTTCTGCTTTTTTATTTGCTGGATTATAAATGGTTGCTTGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTTCTGCTTTTTTATTTGCTGGATTATAAATGGTTGCTTGGAAA  450

seq1  TATCCTGACAAGGAAAATTGGACCTGTCCCTAAGAATTC  489
      |||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGACAAGGAAAATTGGACCTGTCCCTAAGAATTC  489


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