BAC Information

Click to search

BAC

Clone NameB6Ng01-276P14
Chromosome11 (Build37)
Map Location 25,640,627 - 25,641,243
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042282
Downstream geneLOC100042328, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276P14.bB6Ng01-276P14.g
ACCGA077615GA077616
length1,229617
definitionB6Ng01-276P14.b B6Ng01-276P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttggttctatattccagtttttgattgagttgtttggtt
tctttggaggttagcttcatgagttctttacatattttggatattagccc
tctatcggatgtggggttagtgaagatatttttcccaatcagtagattgc
tgatttgtcccattgactatgtcctttgccttacagaagcttttaaattt
tatgaggtcttgtttatcaattcttgatcttagagcctgagccattggag
ttctatttagggaatttcctctgtgccagtaagtttgagactctttccta
cattctcttctattagattcagtgtatctggttctagattgaggtccttg
atccacctggactttcatattgatcaaagaaaaatctaccaagagaaagt
ctcaattctgaatatctatgccccaaatgcaagggcacccacattcataa
aagaaactttactaaagctcaaaacacacattgaactccacacaataata
gtggaagactcaacaccccactttcaccagtggatggataatggaaacag
aaactaaacagagacatagtgaaactaatagaggttatgaagaaaatgaa
tttacacagaacatttcaccctaaaacaaaagaatataccttcttcttgg
tacctcatagtaccttctccaaaactgatcatataatcggtcacaaagca
agtttcaactgatacaagaagattaaaataatcccatgcatactattaga
tcacttgtactaaggctaggcttcaataacaacaaaaataacagaaaact
cacatacccatggaaactgaataactctctactcaatgataacttgttca
ggaaagaaattaaagacttcctggatttcaatgaaaatgatgacacagca
cgcccaaacttttgggggcacaatgaaagcagtgctaaaaggaaaaattc
ataacactaagtgcacacatttattctatttttcagttattagtaaaagt
ctgctaataacctatggccccaatttattataaattcatggagatgttgc
tctcagttattatagcataaggtgttatgatttattcatggagtctttgg
gatttattaggcaaacaacctttaaagattgaacttaaccttacattggc
cttccaaggctctgtggactggttaaggcattcagggaccttgtgttagg
ggataaagggtatggcgctccctcgcttg
gaattcaatcagacaggaacaagttatgccctcctaatactgtctagaaa
ccagatggatagtgactgctttctttttgtttcccccttccttactatct
cttgctgcacaaaattagttcctcagataccaagattccagaggctcatt
gtcttgcaaaatattcaagtgcctcacaatgatctataataataaacctc
tagtgcaacagcaaaacacagataaaaatgtgaaaatatatgcatatata
cataagataaaatatagaaatagtaggagagagtgactcaccaacacaaa
taaagaggaagcggggaggcaggaagatagctgccctcccaatcagagaa
cagtggaatagaacggatgctcattaaagtagtttactgggctccaattc
tgcctgtgattaagaggtattggttgaaggagattggtgagggagatcaa
tatacttgtcttcattcttaattcttctttaatgtctctacctccacagg
ggaggctgaatcatagttgaagaataaatctttaaccaccaggaggctaa
acttcagggaaaaaggaaaacagaaaaaaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25640627_25641243
seq2: B6Ng01-276P14.g_68_684

seq1  GAATTCAATCAGACAGGAACAAGTTATGCCCTCCTAATACTGTCTAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCAGACAGGAACAAGTTATGCCCTCCTAATACTGTCTAGAAA  50

seq1  CCAGATGGATAGTGACTGCTTTCTTTTTGTTTCCCCCTTCCTTACTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGATAGTGACTGCTTTCTTTTTGTTTCCCCCTTCCTTACTATCT  100

seq1  CTTGCTGCACAAAATTAGTTCCTCAGATACCAAGATTCCAGAGGCTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGCACAAAATTAGTTCCTCAGATACCAAGATTCCAGAGGCTCATT  150

seq1  GTCTTGCAAAATATTCAAGTGCCTCACAATGATCTATAATAATAAACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCAAAATATTCAAGTGCCTCACAATGATCTATAATAATAAACCTC  200

seq1  TAGTGCAACAGCAAAACACAGATAAAAATGTGAAAATATATGCATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCAACAGCAAAACACAGATAAAAATGTGAAAATATATGCATATATA  250

seq1  CATAAGATAAAATATAGAAATAGTAGGAGAGAGTGACTCACCAACACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATAAAATATAGAAATAGTAGGAGAGAGTGACTCACCAACACAAA  300

seq1  TAAAGAGGAAGCGGGGAGGCAGGAAGATAGCTGCCCTCCCAATCAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGGAAGCGGGGAGGCAGGAAGATAGCTGCCCTCCCAATCAGAGAA  350

seq1  CAGTGGAATAGAACGGATGCTCATTAAAGTAGTTTACTGGGCTCCAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAATAGAACGGATGCTCATTAAAGTAGTTTACTGGGCTCCAATTC  400

seq1  TGCCTGTGATTAAGAGGTATTGGTTGAAGGAGATTGGTGAGGGAGATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGATTAAGAGGTATTGGTTGAAGGAGATTGGTGAGGGAGATCAA  450

seq1  TATACTTGTCTTCATTCTTAATTCTTCTTTAATGTCTCTACCTCCACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGTCTTCATTCTTAATTCTTCTTTAATGTCTCTACCTCCACAGG  500

seq1  GGAGGCTGAATCATAGTTGAAGAATAAATCTTTAACCACCAGGAGGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGAATCATAGTTGAAGAATAAATCTTTAACCACCAGGAGGCTAA  550

seq1  ACTTCAGGGAAAAAGGAAAACAGAAAAAAAGGAAGGAAGGAAGGAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGGAAAAAGGAAAACAGAAAAAAAGGAAGGAAGGAAGGAAGGAA  600

seq1  GGAAGGAAGGAAGGAAG  617
      |||||||||||||||||
seq2  GGAAGGAAGGAAGGAAG  617