BAC Information

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BAC

Clone NameB6Ng01-278D11
Chromosome11 (Build37)
Map Location 30,928,734 - 30,929,924
singlet/doubletsinglet
Overlap geneAsb3
Upstream geneSpnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik, Chac2
Downstream geneStc2, 2310022M17Rik, Cpeb4, 4930524B15Rik, Nsg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278D11.bB6Ng01-278D11.g
ACCGA078519GA078520
length6461,167
definitionB6Ng01-278D11.b B6Ng01-278D11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctcatccagcaccatgttgtcttgatgataatggactgaa
cctctgaacctttaagccagcctcaattaaatgttgtcctttataagagt
tgccttagtcatggtgtctcttcacaggaatggaaaccctgcagacagga
gcctagcaaaccatcaccagagaggcttcacccagcaatttatggaaaca
gaggcagagatccagtcaaacattaggtaatgcttaggaaatcatgtgga
agagggggaggaaggattctaggagggaagtagattcatttcctagaaca
caaggaactctacaaaatcaaccaacctgggctcaaagtggtccacagga
actgaactgtcaactaaggagcatgcgttggaccaacctaggccctatgt
acatatgtaacttttgtgcagtgtggccttcatgtacgactcctaacagt
ggaagcaggagctgtctccaactctgttgcctgcctttgggactctttcc
ccctacttttccccttagctgctttgtctaaccttaatagaagatgagcc
tagttttactgcaatttgatatgtgaaggctggttgatctccatgggagg
tttccccttttctgatgagaaagggaggagaagtggatgggggttg
gaattcctctctatatatgcacaggctcttcttacatgcaggggtttaga
cacatgcaggcacacacacacaaacacacacacacacacacacacacaca
cctttaaactgaactttaccatacatgaaatttttaaataaatattttat
attcacagaaaaatatttctacagatattttattctcatgtgaataacaa
aatctagatagacagaatactttcatttttataaatgaagcaacaggcat
acagtaaatgagtgatcatacaaattatatgtggtaggaccaaaactgga
gaatagatatactaattctacttcaaaggcatcctatgaatttcctcctg
tctcagacaatcttatggggaaaatatgtccctaaaatccaaagagaacc
atatataagacagaataaaaagtaaaaatattgttattggaatatgacaa
cttagcatttggttgtgatccttaaggaattaaaagttcctcactgtaga
agactgacttgtgatccacaggcaacaaataatgatcccttccatggaac
cttaatcttttaatactaagacaagaccttagcagataaccttgcaatga
ctgctccaataaaacatcattggtcttcagcactgccctggtcaacaggg
cagtttagtgcacaatgggttttgcagctttaaataaaaattttcaagtc
ccaaatactactaccactcaaaggtagagaaacaagagaaaaatctttca
aattagcttttcggtttcaaaaatcaaaggaagaagaaacatcctgtaac
agtttctctaacaaaaacattttaaaagtacatctgtaccaaaaatagta
tacatcacctaaaaacaatggtgtagtttcttctaaagtggtttcattag
gatcagctccagcttccaaaagaatctgtgtgattttccaatgtccttga
ctcacagcaagatgcaatgcacagaagccctcaaacgtcttgccttaatg
tagtcttcagatgaatctgtgagaagggaaacccattagcaaaagatatc
agtctacttctgggcatgaaacaaagactaattgtgacgtgatgaacagg
aagtacaggagtcagggacagctgataaggaagactcagttgaacgcctt
ggtattcttgcccagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30928734_30929924
seq2: B6Ng01-278D11.g_65_1231 (reverse)

seq1  TTCTGTGGCAAGAATACCAAAGGGCTGTTCACACTGGAGTCCTTCCTTAT  50
      ||||| ||||||||||||||  ||| ||||| ||| |||| |||||||||
seq2  TTCTG-GGCAAGAATACCAA--GGC-GTTCA-ACT-GAGT-CTTCCTTAT  43

seq1  ACAGCTGTCCCTTGACTCACTGGTACTTTCCTGTTTCATTCAACGTCACA  100
       |||||||||| |||||| || |||| |||||| |||||   ||||||||
seq2  -CAGCTGTCCC-TGACTC-CT-GTAC-TTCCTG-TTCAT--CACGTCACA  85

seq1  TATAGTCTTTGTTTTTCATGCCCAAGAAGTAGGACTGATAATCTTTTGGC  150
        |||||||||  |||||||||| ||||||| ||||||| ||||||| ||
seq2  ATTAGTCTTTG--TTTCATGCCC-AGAAGTA-GACTGAT-ATCTTTT-GC  129

seq1  TAATGGGTTTCCCTTCCTCCACAGATTCATCTGAAAACTACATTAAGGCA  200
      ||||||||||||||||   |||||||||||||||| ||||||||||||| 
seq2  TAATGGGTTTCCCTTC--TCACAGATTCATCTGAAGACTACATTAAGGC-  176

seq1  AAGACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTGAGTCAAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTGAGTCAAGGACA  226

seq1  TTGGAAAATCACACAGATTCTTTTGGAAGCTGGAGCTGATCCTAATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAATCACACAGATTCTTTTGGAAGCTGGAGCTGATCCTAATGAAA  276

seq1  CCACTTTAGAAGAAACTACACCATTGTTTTTAGGTGATGTATACTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTAGAAGAAACTACACCATTGTTTTTAGGTGATGTATACTATTTT  326

seq1  TGGTACAGATGTACTTTTAAAATGTTTTTGTTAGAGAAACTGTTACAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAGATGTACTTTTAAAATGTTTTTGTTAGAGAAACTGTTACAGGA  376

seq1  TGTTTCTTCTTCCTTTGATTTTTGAAACCGAAAAGCTAATTTGAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTCTTCCTTTGATTTTTGAAACCGAAAAGCTAATTTGAAAGATT  426

seq1  TTTCTCTTGTTTCTCTACCTTTGAGTGGTAGTAGTATTTGGGACTTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTGTTTCTCTACCTTTGAGTGGTAGTAGTATTTGGGACTTGAAA  476

seq1  ATTTTTATTTAAAGCTGCAAAACCCATTGTGCACTAAACTGCCCTGTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTAAAGCTGCAAAACCCATTGTGCACTAAACTGCCCTGTTGA  526

seq1  CCAGGGCAGTGCTGAAGACCAATGATGTTTTATTGGAGCAGTCATTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAGTGCTGAAGACCAATGATGTTTTATTGGAGCAGTCATTGCAA  576

seq1  GGTTATCTGCTAAGGTCTTGTCTTAGTATTAAAAGATTAAGGTTCCATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTGCTAAGGTCTTGTCTTAGTATTAAAAGATTAAGGTTCCATGG  626

seq1  AAGGGATCATTATTTGTTGCCTGTGGATCACAAGTCAGTCTTCTACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATCATTATTTGTTGCCTGTGGATCACAAGTCAGTCTTCTACAGTG  676

seq1  AGGAACTTTTAATTCCTTAAGGATCACAACCAAATGCTAAGTTGTCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTTTAATTCCTTAAGGATCACAACCAAATGCTAAGTTGTCATAT  726

seq1  TCCAATAACAATATTTTTACTTTTTATTCTGTCTTATATATGGTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAACAATATTTTTACTTTTTATTCTGTCTTATATATGGTTCTCTT  776

seq1  TGGATTTTAGGGACATATTTTCCCCATAAGATTGTCTGAGACAGGAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTAGGGACATATTTTCCCCATAAGATTGTCTGAGACAGGAGGAA  826

seq1  ATTCATAGGATGCCTTTGAAGTAGAATTAGTATATCTATTCTCCAGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGGATGCCTTTGAAGTAGAATTAGTATATCTATTCTCCAGTTTT  876

seq1  GGTCCTACCACATATAATTTGTATGATCACTCATTTACTGTATGCCTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTACCACATATAATTTGTATGATCACTCATTTACTGTATGCCTGTT  926

seq1  GCTTCATTTATAAAAATGAAAGTATTCTGTCTATCTAGATTTTGTTATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTATAAAAATGAAAGTATTCTGTCTATCTAGATTTTGTTATTC  976

seq1  ACATGAGAATAAAATATCTGTAGAAATATTTTTCTGTGAATATAAAATAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAATAAAATATCTGTAGAAATATTTTTCTGTGAATATAAAATAT  1026

seq1  TTATTTAAAAATTTCATGTATGGTAAAGTTCAGTTTAAAGGTGTGTGTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAAATTTCATGTATGGTAAAGTTCAGTTTAAAGGTGTGTGTGT  1076

seq1  GTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGCCTGCATGTGTCTAAACCC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGCCTGCATGTGTCTAAACCC  1126

seq1  CTGCATGTAAGAAGAGCCTGTGCATATATAGAGAGGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTAAGAAGAGCCTGTGCATATATAGAGAGGAATTC  1167