BAC Information

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BAC

Clone NameB6Ng01-278F03
Chromosome11 (Build37)
Map Location 30,928,783 - 30,929,924
singlet/doubletsinglet
Overlap geneAsb3
Upstream geneSpnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik, Chac2
Downstream geneStc2, 2310022M17Rik, Cpeb4, 4930524B15Rik, Nsg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278F03.bB6Ng01-278F03.g
ACCGA078599GA078600
length5891,125
definitionB6Ng01-278F03.b B6Ng01-278F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacctcatccagcaccatgttgtcttgatgataatggactgaacctctg
aacctttaagccagcctcaattaaatgttgtcctttataagagttgcctt
agtcatggtgtctcttcacaggaatggaaaccctgcagacaggagcctag
caaaccatcaccagagaggcttcacccagcaatttatggaaacagaggca
gagatccagtcaaacattaggtaatgcttaggaaatcatgtggaagaggg
ggaggaaggattctaggagggaagtttattcgtatagctggtctgctcta
ccccagggcagcttggtacctggaacatggtatggagctaaggcctgcaa
gcttaaagctgatctggaactcttcagctaaagcagaccctaccagaacg
taaacctgcgtgtcagtctcatctcagtctcatctcagccaagagactcc
agagaatgggggggggggggtgcctgcctttgggactctttccccctact
tttccccttagctgctttgtctaaccttaatagaagatgagcctagtttt
actgcaatttgatatgtgaaggctggttgatctccatgg
gaattcctctctatatatgcacaggctcttcttacatgcaggggtttaga
cacatgcaggcacacacacacaaacacacacacacacacacacacacaca
cctttaaactgaactttaccatacatgaaatttttaaataaatattttat
attcacagaaaaatatttctacagatattttattctcatgtgaataacaa
aatctagatagacagaatactttcatttttataaatgaagcaacaggcat
acagtaaatgagtgatcatacaaattatatgtggtaggaccaaaactgga
gaatagatatactaattctacttcaaaggcatcctatgaatttcctcctg
tctcagacaatcttatggggaaaatatgtccctaaaatccaaagagaacc
atatataagacagaataaaaagtaaaaatattgttattggaatatgacaa
cttagcatttggttgtgatccttaaggaattaaaagttcctcactgtaga
agactgacttgtgatccacaggcaacaaataatgatcccttccatggaac
cttaatcttttaatactaagacaagaccttagcagataaccttgcaatga
ctgctccaataaaacatcattggtcttcagcactgccctggtcaacaggg
cagtttagtgcacaatgggttttgcagctttaaataaaaattttcaagtc
ccaaatactactaccactcaaaggtagagaaacaagagaaaaatctttca
aattagcttttcggtttcaaaaatcaaaggaagaagacacatcctgtaac
agtttctctaacaaaaacattttaaaaggtacatctgtaccaaaaatagt
atacatcacctaaaaacaatggtgtagtttcttctaaagtggttcattag
gatcagctccagcttccaaagatctgtgtgatttccattgtccttgactc
acagcgagatgcaatgcacagagccctcaacgtctttgccttatgtagtt
tcagatgatctgtgaggagggaaaccattagccaagattatcagtcctac
ttcttgggcatgaaaacaagactatattgtgacgtgcattgaacagttag
ttacagtgagtcaaggtaagctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30928783_30929924
seq2: B6Ng01-278F03.g_63_1187 (reverse)

seq1  TACAGCTGTCCCTTGACTCACTGGTACTTTCCTGTTTCATTCAACGTCAC  50
      ||||||| | |||||||||||| |||  |  ||| |||| |  |||||||
seq2  TACAGCT-TACCTTGACTCACT-GTAACTAACTG-TTCAATGCACGTCAC  47

seq1  -ATATAGTCTTTGTTTTTCATGCCCAAGAAGTAGGACTGATAATCTTTTG  99
       ||||||||||   |||||||||||||||||||||||||||||||  |||
seq2  AATATAGTCTT--GTTTTCATGCCCAAGAAGTAGGACTGATAATC--TTG  93

seq1  GCTAATGGGTTTCCCTTCCTCCACAGATTCATCTGAAAACTACATTAAGG  149
      |||||| |||||||| |||| |||||| ||||||| |||||||| |||||
seq2  GCTAAT-GGTTTCCC-TCCT-CACAGA-TCATCTG-AAACTACA-TAAGG  137

seq1  CAAAGACGTTTGAGGGCTTCTGTGCATTGCATCTTGCTGTGAGTCAAGGA  199
      |||||||| |||||||| |||||||||||||||| |||||||||||||||
seq2  CAAAGACG-TTGAGGGC-TCTGTGCATTGCATCTCGCTGTGAGTCAAGGA  185

seq1  CATTGGAAAATCACACAGATTCTTTTGGAAGCTGGAGCTGATCCTAATGA  249
      || ||| |||||||||||||   |||||||||||||||||||||||||| 
seq2  CAATGG-AAATCACACAGAT--CTTTGGAAGCTGGAGCTGATCCTAATG-  231

seq1  AACCACTTTAGAAGAAACTACACCATTGTTTTTAGGTGATGTATACTATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTTAGAAGAAACTACACCATTGTTTTTAGGTGATGTATACTATT  281

seq1  TTTGGTACAGATGTA-CTTTTAAAATGTTTTTGTTAGAGAAACTGTTACA  348
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGGTACAGATGTACCTTTTAAAATGTTTTTGTTAGAGAAACTGTTACA  331

seq1  GGATGTTTCTTCTTCCTTTGATTTTTGAAACCGAAAAGCTAATTTGAAAG  398
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTCTTCTTCCTTTGATTTTTGAAACCGAAAAGCTAATTTGAAAG  381

seq1  ATTTTTCTCTTGTTTCTCTACCTTTGAGTGGTAGTAGTATTTGGGACTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTCTTGTTTCTCTACCTTTGAGTGGTAGTAGTATTTGGGACTTG  431

seq1  AAAATTTTTATTTAAAGCTGCAAAACCCATTGTGCACTAAACTGCCCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTATTTAAAGCTGCAAAACCCATTGTGCACTAAACTGCCCTGT  481

seq1  TGACCAGGGCAGTGCTGAAGACCAATGATGTTTTATTGGAGCAGTCATTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGGCAGTGCTGAAGACCAATGATGTTTTATTGGAGCAGTCATTG  531

seq1  CAAGGTTATCTGCTAAGGTCTTGTCTTAGTATTAAAAGATTAAGGTTCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTATCTGCTAAGGTCTTGTCTTAGTATTAAAAGATTAAGGTTCCA  581

seq1  TGGAAGGGATCATTATTTGTTGCCTGTGGATCACAAGTCAGTCTTCTACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGGATCATTATTTGTTGCCTGTGGATCACAAGTCAGTCTTCTACA  631

seq1  GTGAGGAACTTTTAATTCCTTAAGGATCACAACCAAATGCTAAGTTGTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAACTTTTAATTCCTTAAGGATCACAACCAAATGCTAAGTTGTCA  681

seq1  TATTCCAATAACAATATTTTTACTTTTTATTCTGTCTTATATATGGTTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAATAACAATATTTTTACTTTTTATTCTGTCTTATATATGGTTCT  731

seq1  CTTTGGATTTTAGGGACATATTTTCCCCATAAGATTGTCTGAGACAGGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATTTTAGGGACATATTTTCCCCATAAGATTGTCTGAGACAGGAG  781

seq1  GAAATTCATAGGATGCCTTTGAAGTAGAATTAGTATATCTATTCTCCAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATAGGATGCCTTTGAAGTAGAATTAGTATATCTATTCTCCAGT  831

seq1  TTTGGTCCTACCACATATAATTTGTATGATCACTCATTTACTGTATGCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCCTACCACATATAATTTGTATGATCACTCATTTACTGTATGCCT  881

seq1  GTTGCTTCATTTATAAAAATGAAAGTATTCTGTCTATCTAGATTTTGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTCATTTATAAAAATGAAAGTATTCTGTCTATCTAGATTTTGTTA  931

seq1  TTCACATGAGAATAAAATATCTGTAGAAATATTTTTCTGTGAATATAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGAGAATAAAATATCTGTAGAAATATTTTTCTGTGAATATAAAA  981

seq1  TATTTATTTAAAAATTTCATGTATGGTAAAGTTCAGTTTAAAGGTGTGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTAAAAATTTCATGTATGGTAAAGTTCAGTTTAAAGGTGTGTG  1031

seq1  TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGCCTGCATGTGTCTAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGCCTGCATGTGTCTAAA  1081

seq1  CCCCTGCATGTAAGAAGAGCCTGTGCATATATAGAGAGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCATGTAAGAAGAGCCTGTGCATATATAGAGAGGAATTC  1125