BAC Information

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BAC

Clone NameB6Ng01-278I02
Chromosome11 (Build37)
Map Location 105,491,056 - 105,492,157
singlet/doubletsinglet
Overlap geneTanc2
Upstream geneItgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807
Downstream geneLOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278I02.bB6Ng01-278I02.g
ACCGA078732GA078733
length4141,107
definitionB6Ng01-278I02.b B6Ng01-278I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
attgtttttaatagctgagtagtactaaactgtgtaaatataccacattt
tctgtatccatcccagatgctggacatctgggttcttttcagtttcttac
tattataaataagaatactatgaacctataggatggaacacagggcaccc
aatggaggagctagagaaagtacccaagaagctgaaggggtctgcaaccc
tataggtggaacaacaatatgaactaaccagtacccccagagctcatgtc
tctaactgcatatgtagcagaagatggcctagtcggctatcattgggaag
agaggccccttggtcttgcaaattttatatgccccagtacaggggaacgc
cagggccaagaagtgggagtgagtgggtaggggagcaggacaagggggag
gatataggggactt
gaattccaggacagctagagctacatagtggaccctgtctccaaaaccaa
atacaaacaaacatccaagtatatatatcagatatactatttataattct
atattaattaattttagagtatacaatgaataaaaatactgaaggaatgg
attctggtttctcatttaagaagggatttaagtaataagttaacacatct
gattttgtttctaatggtctattttttttttcttggtttttcgagacagg
gtttctctgtgtagccctggctgtcctggaacttactttgtagaccagac
tggccttgaattcagaaatctgcctgcctctgcctcccaagtgctgggat
taaaggcgtgcgccaccaccacctggctctaatggtctatttttatacca
cattttaaatcagtgttttttattaagaaaaaaatagtagctttaatact
ataaagttttcatttgaatatatcaagtttttcaaaaaaatatataaata
ttttaagtaaaaaaagaaaaagtctcttcagtgtgaattggtcctgagtt
tgtcattatctcgcctccatttcctgagtactgggattatagatgttatg
ccaccgtgcctggctcatttaaaaacaaaacaaaaagaaactttgattat
aggtttgtgcttctacaaatttgtggtactgtcccatggtctccttatgc
ataatcaaatacatactcatgcatattcattctcccttcctttcctctcc
ttttttaaagacagagttcatactttcaatcttcctgtcaccatctccca
agtgctgtgagtataggtgtgcagttctatgactgttaatattttattta
taggaatttttggttaaaagtctatatatgcattccatttatgaacacgt
aacaacagaatgttgatgataacaccaagaagtgggtgagattacaagaa
agggatagatctgtctttttttttttgttttgtttttgggaaacagtatt
tcatggtgtgtacctgtctgcaagtttcatgcaatatcaacatagactcc
ttttcttcttgattctagagtatattttctataaaatagaggggagtttt
tagtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105491056_105492157
seq2: B6Ng01-278I02.g_66_1172

seq1  GAATTCCAGGACAGCTAGAGCTACATAGTGGACCCTGTCTCCAAAACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCTAGAGCTACATAGTGGACCCTGTCTCCAAAACCAA  50

seq1  ATACAAACAAACATCCAAGTATATATATCAGATATACTATTTATAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACAAACATCCAAGTATATATATCAGATATACTATTTATAATTCT  100

seq1  ATATTAATTAATTTTAGAGTATACAATGAATAAAAATACTGAAGGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATTAATTTTAGAGTATACAATGAATAAAAATACTGAAGGAATGG  150

seq1  ATTCTGGTTTCTCATTTAAGAAGGGATTTAAGTAATAAGTTAACACATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTTTCTCATTTAAGAAGGGATTTAAGTAATAAGTTAACACATCT  200

seq1  GATTTTGTTTCTAATGGTCTATTTTTTTTTTCTTGGTTTTTCGAGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTTTCTAATGGTCTATTTTTTTTTTCTTGGTTTTTCGAGACAGG  250

seq1  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTTACTTTGTAGACCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTTACTTTGTAGACCAGAC  300

seq1  TGGCCTTGAATTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGAATTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGAT  350

seq1  TAAAGGCGTGCGCCACCACCACCTGGCTCTAATGGTCTATTTTTATACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGCGCCACCACCACCTGGCTCTAATGGTCTATTTTTATACCA  400

seq1  CATTTTAAATCAGTGTTTTTTATTAAGAAAAAAATAGTAGCTTTAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAATCAGTGTTTTTTATTAAGAAAAAAATAGTAGCTTTAATACT  450

seq1  ATAAAGTTTTCATTTGAATATATCAAGTTTTTCAAAAAAATATATAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTTTCATTTGAATATATCAAGTTTTTCAAAAAAATATATAAATA  500

seq1  TTTTAAGTAAAAAAAGAAAAAGTCTCTTCAGTGTGAATTGGTCCTGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTAAAAAAAGAAAAAGTCTCTTCAGTGTGAATTGGTCCTGAGTT  550

seq1  TGTCATTATCTCGCCTCCATTTCCTGAGTACTGGGATTATAGATGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTATCTCGCCTCCATTTCCTGAGTACTGGGATTATAGATGTTATG  600

seq1  CCACCGTGCCTGGCTCATTTAAAAACAAAACAAAAAGAAACTTTGATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGTGCCTGGCTCATTTAAAAACAAAACAAAAAGAAACTTTGATTAT  650

seq1  AGGTTTGTGCTTCTACAAATTTGTGGTACTGTCCCATGGTCTCCTTATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTGCTTCTACAAATTTGTGGTACTGTCCCATGGTCTCCTTATGC  700

seq1  ATAATCAAATACATACTCATGCATATTCATTCTCCCTTCCTTTCCTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAATACATACTCATGCATATTCATTCTCCCTTCCTTTCCTCTCC  750

seq1  TTTTTTAAAGACAGAGTTCATACTTTCAATCTTCCTGTCACCATCTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAGACAGAGTTCATACTTTCAATCTTCCTGTCACCATCTCCCA  800

seq1  AGTGCTGTGAGTATAGGTGTGCAGTTCTATGACTGTTAATATTTTATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTGAGTATAGGTGTGCAGTTCTATGACTGTTAATATTTTATTTA  850

seq1  TAGGAA-TTTTGGTTAAAAGTCTATATATGCATTCCATTTATGAACACGT  899
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTTTTGGTTAAAAGTCTATATATGCATTCCATTTATGAACACGT  900

seq1  AACAACAGAATGTTGATGATAACACCAAGAAGTGGGTGAGA-TAC-AGAA  947
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  AACAACAGAATGTTGATGATAACACCAAGAAGTGGGTGAGATTACAAGAA  950

seq1  AGGGATAGAATCTGTC-TTTTTTTTTTGTTTTGTTTTT-GGAAACAGTAT  995
      |||||||| ||||||| ||||||||||||||||||||| |||||||||||
seq2  AGGGATAG-ATCTGTCTTTTTTTTTTTGTTTTGTTTTTGGGAAACAGTAT  999

seq1  TTCATGGTGTGTACCTGTCTGGCAAGTTTCATGC-ATATCAAACATAGAC  1044
      |||||||||||||||||||| ||||||||||||| ||||| |||||||||
seq2  TTCATGGTGTGTACCTGTCT-GCAAGTTTCATGCAATATC-AACATAGAC  1047

seq1  TCCTTTTCTTCCTGGATTCCTAGAGTATA-TTTCTAT-AAATAGA--GGA  1090
      |||||||||| || |||| |||||||||| ||||||| |||||||  |||
seq2  TCCTTTTCTT-CTTGATT-CTAGAGTATATTTTCTATAAAATAGAGGGGA  1095

seq1  GTTTTTAGTTTC  1102
      ||||||||||||
seq2  GTTTTTAGTTTC  1107