BAC Information

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BAC

Clone NameB6Ng01-283L19
Chromosome11 (Build37)
Map Location 90,294,531 - 90,295,601
singlet/doubletsinglet
Overlap genenone
Upstream geneAnkfn1, Pctp, Tmem100, LOC100039104, Mmd, Hlf
Downstream geneStxbp4, LOC100039267, Cox11, Tom1l1, LOC638903, EG664976
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283L19.bB6Ng01-283L19.g
ACCGA082620GA082621
length1,1451,055
definitionB6Ng01-283L19.b B6Ng01-283L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagattgccctgaatttcatccagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacatta
gaaaaaattcaaggccaaacattttccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggccaggcttacctcgtaaagctatact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaattcggcaccaattgttattagacgcgttctcacgaccg
gccaggaaagacacaacaaaccagaatcttctgcggcaaagctttattgc
ttacatcttcaggagccagagtgcaagaagcaagagagcaagaagcaaga
gagagagaaacgaaaccccgtcccttttttaggagagttatatttcgcct
aggacgtgtcactccctgattggctgcagcccatcggcgagttgacgtca
cgggaaggcagagcacatggagtggagaccaccctcggcatatggcgcag
attattgttaccacttagaacacagctgtcaggcgcatctttgtaacgcg
atgtggggcgcggcctcccacatgagcaattccttagtttcctctaaaaa
aaattactcatgattatgctatgtagtccacatccgtttgctggtgcttc
tatacagattcctgtagtctgatctggacgaactgaattaggacctggat
ggttgttatgtctaagtacgagcatataaggctgtcctattgtga
gaattcccaggtgtaaattagatggtccaaactatctgtactgatttcat
tgacacagggaataatggtccatatgagggaagcaatgagtgaaatgaac
ccaagtgttctgagagggcgaacacagagtcagtgcacaactacaatatg
gaaaatgttcctttgcaaaggaaaagcaaagccatgcatcatgatggaag
atggttgtttagagagtatagcaaaatgggcatcagaaaggccaaatttg
gcatcattcactcggtgcctcccaaggaatactctctagagcccttatac
aatatctttcactagagcacacagcacttggctaggaatgtctctggatg
ctcctaccaactcagcttgaagatcagaacactgactcacttaataatta
gctactatcttaagtggttaaattccatgattttgtttcttcatctgaaa
acctagacagtaatagtacttcttttgtttgtttgtttgtttgtttgttt
tgccacattgacctgaacactttgtgcacagactacatttcccagtcttc
tctgggaaatttaggaatgaccatgacattgatttgtgtgcaaagaagca
tgagcagaaataatacatgactcttccaaggctgacacataaagtcttcc
tctacataagcttccaccttcttcatctgtcgaccgatggatgtaacaga
gcctccaacatcctgagaatttgaatgatcatatggtgcaaaatcatatg
gtaccacctctcatttaggaagtaatttaacgcagcatttaatcaactta
cctaaagtttcgttttgctgttgtggagacttgaaagaaatgcatccacg
taaaatattgtagaacagttccaagtccttacattttgtcccaattgttc
ttattctgactagaacagtgttatttgagccctcgtgttatttgtggaga
aagatgaattataattccactaagctactactgctttcatgactaaaaat
acgaattagcatcagcgatcatagtatggtgactgacattgcaatgagtg
aagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_90294531_90295601
seq2: B6Ng01-283L19.g_64_1118 (reverse)

seq1  CTCTTCACTCATATTCGCATATGTTCTAGTCACCCATACCTTATGTACTG  50
      |||||||||||   | ||| ||||   ||||| ||||||  |||| |  |
seq2  CTCTTCACTCA---TTGCA-ATGT--CAGTCA-CCATAC--TATG-ATCG  40

seq1  CTTGATGCCTAATATCGTATTTTTAAAGTCAATGAAAGCAGTAGTAGCTA  100
      | ||||| ||||| ||||||||||  |||| |||||||||||||||||| 
seq2  C-TGATG-CTAAT-TCGTATTTTT--AGTC-ATGAAAGCAGTAGTAGCTT  84

seq1  AGTTGGATTTATTAATTTCATCTTTCT-CACATAT-ACACGA-GGCTCAA  147
      || |||| ||||  | ||||||||||| |||| || |||||| |||||||
seq2  AG-TGGAATTAT--AATTCATCTTTCTCCACAAATAACACGAGGGCTCAA  131

seq1  ATAACACTGGTCTAGTCCAGAATAAGAACAATTGGGACAAAATGTAAGGA  197
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  ATAACACTGTTCTAGT-CAGAATAAGAACAATTGGGACAAAATGTAAGGA  180

seq1  CTTGGAACTGTTCTAC-ATATTTTACGTGGATGCATGTCTTTCAAGTCT-  245
      |||||||||||||||| ||||||||||||||||||| |||||||||||| 
seq2  CTTGGAACTGTTCTACAATATTTTACGTGGATGCATTTCTTTCAAGTCTC  230

seq1  CACAACAGCAAAAACGAAACTTTAGGTAAGTTGATTAAATGCTGCGTTAA  295
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAGC-AAAACGAAACTTTAGGTAAGTTGATTAAATGCTGCGTTAA  279

seq1  ATTACTTCCTAAATGAGAGGTGGTACCATATGATTTTGCACCATATGATC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCCTAAATGAGAGGTGGTACCATATGATTTTGCACCATATGATC  329

seq1  ATTCAAATTCTCAGGATGTTGGAGGCTCTGTTACATCCATCGGTCGACAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTCTCAGGATGTTGGAGGCTCTGTTACATCCATCGGTCGACAG  379

seq1  ATGAAGAAGGTGGAAGCTTATGTAGAGGAAGACTTTATGTGTCAGCCTTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAGGTGGAAGCTTATGTAGAGGAAGACTTTATGTGTCAGCCTTG  429

seq1  GAAGAGTCATGTATTATTTCTGCTCATGCTTCTTTGCACACAAATCAATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCATGTATTATTTCTGCTCATGCTTCTTTGCACACAAATCAATG  479

seq1  TCATGGTCATTCCTAAATTTCCCAGAGAAGACTGGGAAATGTAGTCTGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCATTCCTAAATTTCCCAGAGAAGACTGGGAAATGTAGTCTGTG  529

seq1  CACAAAGTGTTCAGGTCAATGTGGCAAAACAAACAAACAAACAAACAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTGTTCAGGTCAATGTGGCAAAACAAACAAACAAACAAACAAAC  579

seq1  AAAAGAAGTACTATTACTGTCTAGGTTTTCAGATGAAGAAACAAAATCAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTACTATTACTGTCTAGGTTTTCAGATGAAGAAACAAAATCAT  629

seq1  GGAATTTAACCACTTAAGATAGTAGCTAATTATTAAGTGAGTCAGTGTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTAACCACTTAAGATAGTAGCTAATTATTAAGTGAGTCAGTGTTC  679

seq1  TGATCTTCAAGCTGAGTTGGTAGGAGCATCCAGAGACATTCCTAGCCAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCAAGCTGAGTTGGTAGGAGCATCCAGAGACATTCCTAGCCAAG  729

seq1  TGCTGTGTGCTCTAGTGAAAGATATTGTATAAGGGCTCTAGAGAGTATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTGCTCTAGTGAAAGATATTGTATAAGGGCTCTAGAGAGTATTC  779

seq1  CTTGGGAGGCACCGAGTGAATGATGCCAAATTTGGCCTTTCTGATGCCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGGCACCGAGTGAATGATGCCAAATTTGGCCTTTCTGATGCCCA  829

seq1  TTTTGCTATACTCTCTAAACAACCATCTTCCATCATGATGCATGGCTTTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTATACTCTCTAAACAACCATCTTCCATCATGATGCATGGCTTTG  879

seq1  CTTTTCCTTTGCAAAGGAACATTTTCCATATTGTAGTTGTGCACTGACTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTTTGCAAAGGAACATTTTCCATATTGTAGTTGTGCACTGACTC  929

seq1  TGTGTTCGCCCTCTCAGAACACTTGGGTTCATTTCACTCATTGCTTCCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCGCCCTCTCAGAACACTTGGGTTCATTTCACTCATTGCTTCCCT  979

seq1  CATATGGACCATTATTCCCTGTGTCAATGAAATCAGTACAGATAGTTTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGACCATTATTCCCTGTGTCAATGAAATCAGTACAGATAGTTTGG  1029

seq1  ACCATCTAATTTACACCTGGGAATTC  1071
      ||||||||||||||||||||||||||
seq2  ACCATCTAATTTACACCTGGGAATTC  1055