BAC Information

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BAC

Clone NameB6Ng01-284L21
Chromosome11 (Build37)
Map Location 94,600,443 - 94,762,761
singlet/doubletdoublet
Overlap geneCdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739
Upstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038
Downstream geneCol1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3, Dlx3, Dlx4, LOC100039437, Tac4, Myst2, 5730593F17Rik, Slc35b1, Spop, LOC100039483, Nxph3, Ngfr, Phb, 1110035M17Rik, Zfp652, EG665273, Phospho1, Abi3, Gngt2, LOC100040014, B4galnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L21.bB6Ng01-284L21.g
ACCGA083369GA083370
length998597
definitionB6Ng01-284L21.b B6Ng01-284L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,600,443 - 94,601,126)(94,762,165 - 94,762,761)
sequence
gaattcaaagccagcctggtctacagagtgagttccaggacagccaggga
tacacagagaaaccctgtctcaaaaaaacaaacaaacaaaagtttgcccc
tgggctgggcagggatattattgccttctgtccaacactgaccaaggaga
ctttaagcaacttcacaaggtacattagagagtaaagagggctggagaga
tgatggctcagcagttaagagcactggatgttcttccaaaggtcctgagt
tcaaatcccatcaaccacatggtggctcataaccatctataacaagatct
gacaccctttggagtagctgaagacagctatagcatacttacatataaga
aagaaagagccgggcgtggtggcagaggcaggcggttttctgaattcaag
gccagcctggtctacaaagtgagttccaggacagccagggctacaccgag
aaaccctgtcttaaaaaacaaaacaaaacaaaacaaaagaaagaaagaaa
gaaagaaagaaagaaagaaagtaaagacagctgctaaaatagatttccct
tgtcacccagttggccccagatattagaaaaaaaaaattctaaacattag
aaaactgtaaaggtctgagtaggtcccagttgctagaggcagcttcaagg
gcgtgcagcaacagagcactgactgggactcacctttcacataaacggaa
agccatggtccccttctccgatgatgagctgtagttagatacccagcaaa
attgtggtgtctcatcctctctgtcagaggaaaccaactgttcaggactc
acccaatgccaagcacctgtgattgttcaactaaccagttctgctgcctt
catccagagtcaacaaaacccagcgatcctgggaacataaggggcaaatt
tttagttccatgttacctaggttgaagagacaggcatcatgggtgccctg
ctggtcaccctgccattgtacctcacctgcctgtgaagaaacctggga
gaattccactgcacttaactgaacttttctgaactgaactcaactaaccc
cactacactgcgggaactcatcaaaactgccctccacccttctttttcct
gtctgttcccgtgagagttgggtgtatcctatctcagattcatcctgtca
cattcatcactgtgtctgccccttagttagtatcactttcagatatggct
gcttccttctacaaattaaatctaccttcatcatttgagattaaaggtgt
gtcctaaggtgtgtctatattccaaccagagggattaaaggtggtggcct
gtctgcctttcagaaggatcacacggacctagatggtctttggatgggat
ctcttgccagagcagccatgttgctagattaaaaattcctctacagtact
ttcctttccttcctttgcaccatcagagttccatctgggatcacttcatc
cacatttatttgaaaacatactaaaatttaaaaaaaaaaaaaaaaaaaaa
ggaaagaaagaagaagaaaagaaaatcctgatggtggtggcacacacttt
taatcccagcactcaggaggcagaagcagtggatttctgagtttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_94600443_94601126
seq2: B6Ng01-284L21.b_49_732

seq1  GAATTCAAAGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGA  50

seq1  TACACAGAGAAACCCTGTCTCAAAAAAACAAACAAACAAAAGTTTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTGTCTCAAAAAAACAAACAAACAAAAGTTTGCCCC  100

seq1  TGGGCTGGGCAGGGATATTATTGCCTTCTGTCCAACACTGACCAAGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGGGCAGGGATATTATTGCCTTCTGTCCAACACTGACCAAGGAGA  150

seq1  CTTTAAGCAACTTCACAAGGTACATTAGAGAGTAAAGAGGGCTGGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGCAACTTCACAAGGTACATTAGAGAGTAAAGAGGGCTGGAGAGA  200

seq1  TGATGGCTCAGCAGTTAAGAGCACTGGATGTTCTTCCAAAGGTCCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTCAGCAGTTAAGAGCACTGGATGTTCTTCCAAAGGTCCTGAGT  250

seq1  TCAAATCCCATCAACCACATGGTGGCTCATAACCATCTATAACAAGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCATCAACCACATGGTGGCTCATAACCATCTATAACAAGATCT  300

seq1  GACACCCTTTGGAGTAGCTGAAGACAGCTATAGCATACTTACATATAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTTTGGAGTAGCTGAAGACAGCTATAGCATACTTACATATAAGA  350

seq1  AAGAAAGAGCCGGGCGTGGTGGCAGAGGCAGGCGGTTTTCTGAATTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGCCGGGCGTGGTGGCAGAGGCAGGCGGTTTTCTGAATTCAAG  400

seq1  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACCGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACCGAG  450

seq1  AAACCCTGTCTTAAAAAACAAAACAAAACAAAACAAAAGAAAGAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTTAAAAAACAAAACAAAACAAAACAAAAGAAAGAAAGAAA  500

seq1  GAAAGAAAGAAAGAAAGAAAGTAAAGACAGCTGCTAAAATAGATTTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGTAAAGACAGCTGCTAAAATAGATTTCCCT  550

seq1  TGTCACCCAGTTGGCCCCAGATATTAGAAAAAAAAAATTCTAAACATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCCAGTTGGCCCCAGATATTAGAAAAAAAAAATTCTAAACATTAG  600

seq1  AAAACTGTAAAGGTCTGAGTAGGTCCCAGTTGCTAGAGGCAGCTTCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTAAAGGTCTGAGTAGGTCCCAGTTGCTAGAGGCAGCTTCAAGG  650

seq1  GCGTGCAGCAACAGAGCACTGACTGGGACTCACC  684
      ||||||||||||||||||||||||||||||||||
seq2  GCGTGCAGCAACAGAGCACTGACTGGGACTCACC  684

seq1: chr11_94762165_94762761
seq2: B6Ng01-284L21.g_70_666 (reverse)

seq1  CTCAAACTCAGAAATCCACTGCTTCTGCCTCCTGAGTGCTGGGATTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCAGAAATCCACTGCTTCTGCCTCCTGAGTGCTGGGATTAAAA  50

seq1  GTGTGTGCCACCACCATCAGGATTTTCTTTTCTTCTTCTTTCTTTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCCACCACCATCAGGATTTTCTTTTCTTCTTCTTTCTTTCCTTT  100

seq1  TTTTTTTTTTTTTTTTTTAAATTTTAGTATGTTTTCAAATAAATGTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTAAATTTTAGTATGTTTTCAAATAAATGTGGAT  150

seq1  GAAGTGATCCCAGATGGAACTCTGATGGTGCAAAGGAAGGAAAGGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATCCCAGATGGAACTCTGATGGTGCAAAGGAAGGAAAGGAAAGT  200

seq1  ACTGTAGAGGAATTTTTAATCTAGCAACATGGCTGCTCTGGCAAGAGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGAGGAATTTTTAATCTAGCAACATGGCTGCTCTGGCAAGAGATC  250

seq1  CCATCCAAAGACCATCTAGGTCCGTGTGATCCTTCTGAAAGGCAGACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAAAGACCATCTAGGTCCGTGTGATCCTTCTGAAAGGCAGACAGG  300

seq1  CCACCACCTTTAATCCCTCTGGTTGGAATATAGACACACCTTAGGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCTTTAATCCCTCTGGTTGGAATATAGACACACCTTAGGACACA  350

seq1  CCTTTAATCTCAAATGATGAAGGTAGATTTAATTTGTAGAAGGAAGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCTCAAATGATGAAGGTAGATTTAATTTGTAGAAGGAAGCAGC  400

seq1  CATATCTGAAAGTGATACTAACTAAGGGGCAGACACAGTGATGAATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGAAAGTGATACTAACTAAGGGGCAGACACAGTGATGAATGTGA  450

seq1  CAGGATGAATCTGAGATAGGATACACCCAACTCTCACGGGAACAGACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGAATCTGAGATAGGATACACCCAACTCTCACGGGAACAGACAGG  500

seq1  AAAAAGAAGGGTGGAGGGCAGTTTTGATGAGTTCCCGCAGTGTAGTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGGGTGGAGGGCAGTTTTGATGAGTTCCCGCAGTGTAGTGGGG  550

seq1  TTAGTTGAGTTCAGTTCAGAAAAGTTCAGTTAAGTGCAGTGGAATTC  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGAGTTCAGTTCAGAAAAGTTCAGTTAAGTGCAGTGGAATTC  597