BAC Information

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BAC

Clone NameB6Ng01-286K04
Chromosome11 (Build37)
Map Location 7,094,088 - 7,095,252
singlet/doubletsinglet
Overlap genenone
Upstream geneNudcd3, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347
Downstream geneIgfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286K04.bB6Ng01-286K04.g
ACCGA084781GA084782
length1,1671,147
definitionB6Ng01-286K04.b B6Ng01-286K04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaactgataaacactcaatttttaaaagagtttatttttgat
aatctgtatgggagaggaatttgtgtgcatgtgagtgcaggtgcccttgg
tgaccagtagagggcatcaggtctccctgcagctggagttccaggttgtt
gtgagccaccagacaaaagtgctaggaactgaatccaggtcctctataag
aacagtgtgtcatgtctgcagcccctaacgcttaactggaagctatttga
aatgaatagcttgtccctaaataatttcatttctggaagctctgaagttt
cacttgacttcttcgacttgtaatcgctatccgcacttgaaatgtttact
ttatgaaacacaggaaaggcacaacagtgacaaatatttgggactctctg
ccaggctatcgccacaaatagtttgttctgctgcaccattgcccagcact
catccggtcgtcccttccctgattcctccctctcctgcacatagcggtcc
ttcctcctttccaaagattgatgtcccaatgtttccattgcttacctcac
agtcacacaaaccaaacagccaccaaactcctctttgattccccacactc
tgtcaacacaaatgaagccagctccccacctcaccccaggcccatgtaga
cggccagttcatttgtccatgctgtgtgggatggggcgactggcccttct
cctgagtcacagcttgactcagctccctctcttgccaatgagatgccctc
cttgcctgttcactgcaaacaactcagttccacttccaaaccagaatttc
cactgccccctgtaactttatgtctttgtgcacagtgactagtctcccct
aaaagctgtcttccaagactcccacggcttcccctatgtggcacatgacc
cttccctcccagcttcttggtggtttatttcataaactcctatctgtatg
ctttcactcactctgcagtggggcagagaggagctgtctttctgagtgag
ggagacagagttgggcataggaaagagagttagtggggtgccccaaaaca
aagtccaatcatatgccctgcccagcagcaagaagtcttatgggaggctc
ataaggttcatcccatgcctgcctttggcaagaagaaccgagaacatcca
gagcgttgccacctcta
gaattctttgtttaacccattttttaatagggttattggttttctggaat
ccaacttcttgagttctatctatctatctatctatctatctatctatcta
tctatctatctatctatctatctatctacctatctatctatctatctatc
tacatatatatatatgcatatatatatatattggatattagccccctatt
ggttttaggattggtaacgatctttcccaatctgttggtggcccttttgt
ccttgccttacagaagctttgcaattttatgaggtcccatttgttgattc
ttgatcttacagcacaagccattgctgttctgtttaggaatttttcctct
gtgcccatatcttcgagactcttccccactttctcctctataagtttaag
ggtctctggttttatgtggagttccttgatccacttacacctgagctttg
tacaaggagataagaatggatcaattcccattcttctatatgataacagc
cagttgagccagcaccatttttttgaaaataccgtcttttttccactgga
tggttttagctcccttgtcaaagatcaagtgaccataggtgtgtgggttc
atttctgggtcttcagttctattccattggtgtacttgtctgtcactata
ccagtaccatgcagtttttatcacaattgctctgtagaacagctttaggt
caggcatggtgattccaccagaggttcttttattgttgagaagagttttt
gctatcctggttttcttgttattccagatgaatttgcaaaattttctttc
taattctgtgaagaattgagtttggaattttgatgaagattgcattgatt
tctgtagattgctttcggcaagatagctatttttactatattaatcctgc
caatccatgagcaggagattctttcaattctttcttcagaggacttgaag
ttcttaccatacagatctttcacttccttagataagtcacaccaaggtat
tttaatattattgtgacttattggtgagggtgtggtttccttatttcctt
cttcagccttgttatccttgtggtaagaaggccaatgattgttgggttaa
ttttctatcagctactgcactgtgagcttttatcatgtgtaggagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7094088_7095252
seq2: B6Ng01-286K04.b_47_1213 (reverse)

seq1  TAGAGGTGGCCAAACGCTCTGGATGTTCTC-GTCTTTCCTGCCAAGGGCA  49
      ||||||||||  |||||||||||||||||| ||  ||| |||||| ||||
seq2  TAGAGGTGGC--AACGCTCTGGATGTTCTCGGTTCTTCTTGCCAAAGGCA  48

seq1  -GCATGGGATGAA-CTTATGAGCCCTCCAT-AGACTTCCTGCTTGCTGGG  96
       |||||||||||| ||||||||||  |||| ||||||| ||| |||| ||
seq2  GGCATGGGATGAACCTTATGAGCCTCCCATAAGACTTCTTGC-TGCT-GG  96

seq1  GCAGGGGCATATGATTGGACTTTG-TTTGGGGCACCCCACTACCTCTCTT  145
      ||| |||||||||||||||||||| ||||||||||||||||| |||||||
seq2  GCA-GGGCATATGATTGGACTTTGTTTTGGGGCACCCCACTAACTCTCTT  145

seq1  TCCTATGCCCAACTCTGTCTCCCTCACTCAG-AAGACAGCTCCTCTCTGC  194
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCTATGCCCAACTCTGTCTCCCTCACTCAGAAAGACAGCTCCTCTCTGC  195

seq1  CCCACTGCAGAGTGAGTGAAAGCATACAGATAGGAGTTTATGAAATAAAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCAGAGTGAGTGAAAGCATACAGATAGGAGTTTATGAAATAAAC  245

seq1  CACCAAGAAGCTGGGA-GGAAGGGTCATGTGCCACATAGGGGAAGCCGTG  293
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CACCAAGAAGCTGGGAGGGAAGGGTCATGTGCCACATAGGGGAAGCCGTG  295

seq1  GGAGTCTTGGAAGACAGCTTTTAGGGGAGACTAGTCACTGTGCACAAAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTTGGAAGACAGCTTTTAGGGGAGACTAGTCACTGTGCACAAAGA  345

seq1  CATAAAGTTACAGGGGGCAGTGGAAATTCTGGTTTGGAAGTGGAACTGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTTACAGGGGGCAGTGGAAATTCTGGTTTGGAAGTGGAACTGAG  395

seq1  TTGTTTGCAGTGAACAGGCAAGGAGGGCATCTCATTGGCAAGAGAGGGAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCAGTGAACAGGCAAGGAGGGCATCTCATTGGCAAGAGAGGGAG  445

seq1  CTGAGTCAAGCTGTGACTCAGGAGAAGGGCCAGTCGCCCCATCCCACACA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAAGCTGTGACTCAGGAGAAGGGCCAGTCGCCCCATCCCACACA  495

seq1  GCATGGACAAATGAACTGGCCGTCTACATGGGCCTGGGGTGAGGTGGGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGACAAATGAACTGGCCGTCTACATGGGCCTGGGGTGAGGTGGGGA  545

seq1  GCTGGCTTCATTTGTGTTGACAGAGTGTGGGGAATCAAAGAGGAGTTTGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTCATTTGTGTTGACAGAGTGTGGGGAATCAAAGAGGAGTTTGG  595

seq1  TGGCTGTTTGGTTTGTGTGACTGTGAGGTAAGCAATGGAAACATTGGGAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTTGGTTTGTGTGACTGTGAGGTAAGCAATGGAAACATTGGGAC  645

seq1  ATCAATCTTTGGAAAGGAGGAAGGACCGCTATGTGCAGGAGAGGGAGGAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTTTGGAAAGGAGGAAGGACCGCTATGTGCAGGAGAGGGAGGAA  695

seq1  TCAGGGAAGGGACGACCGGATGAGTGCTGGGCAATGGTGCAGCAGAACAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGGGACGACCGGATGAGTGCTGGGCAATGGTGCAGCAGAACAA  745

seq1  ACTATTTGTGGCGATAGCCTGGCAGAGAGTCCCAAATATTTGTCACTGTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGTGGCGATAGCCTGGCAGAGAGTCCCAAATATTTGTCACTGTT  795

seq1  GTGCCTTTCCTGTGTTTCATAAAGTAAACATTTCAAGTGCGGATAGCGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTCCTGTGTTTCATAAAGTAAACATTTCAAGTGCGGATAGCGAT  845

seq1  TACAAGTCGAAGAAGTCAAGTGAAACTTCAGAGCTTCCAGAAATGAAATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTCGAAGAAGTCAAGTGAAACTTCAGAGCTTCCAGAAATGAAATT  895

seq1  ATTTAGGGACAAGCTATTCATTTCAAATAGCTTCCAGTTAAGCGTTAGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGACAAGCTATTCATTTCAAATAGCTTCCAGTTAAGCGTTAGGG  945

seq1  GCTGCAGACATGACACACTGTTCTTATAGAGGACCTGGATTCAGTTCCTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGACATGACACACTGTTCTTATAGAGGACCTGGATTCAGTTCCTA  995

seq1  GCACTTTTGTCTGGTGGCTCACAACAACCTGGAACTCCAGCTGCAGGGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTGTCTGGTGGCTCACAACAACCTGGAACTCCAGCTGCAGGGAG  1045

seq1  ACCTGATGCCCTCTACTGGTCACCAAGGGCACCTGCACTCACATGCACAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATGCCCTCTACTGGTCACCAAGGGCACCTGCACTCACATGCACAC  1095

seq1  AAATTCCTCTCCCATACAGATTATCAAAAATAAACTCTTTTAAAAATTGA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTCTCCCATACAGATTATCAAAAATAAACTCTTTTAAAAATTGA  1145

seq1  GTGTTTATCAGTTGATGAATTC  1165
      ||||||||||||||||||||||
seq2  GTGTTTATCAGTTGATGAATTC  1167