BAC Information

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BAC

Clone NameB6Ng01-286L22
Chromosome11 (Build37)
Map Location 89,887,438 - 89,888,598
singlet/doubletsinglet
Overlap genenone
Upstream geneDgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1, Pctp
Downstream geneTmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1, LOC638903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286L22.bB6Ng01-286L22.g
ACCGA084859GA084860
length1,1551,111
definitionB6Ng01-286L22.b B6Ng01-286L22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatagaactgtttatgaactgatcttatggaacaaagcaggg
agagctgatcactggcttttttctttaggctgaaaaaaaattaaagtctt
gttttataaagacagccatacgttgtctctttcttgtttagttaagtaaa
ctatacagaaaaagatgattgtctttgttaaaaagagacaagtgtggaac
ttggtaaaaaccaaggatcccaagagagtgcattgccccagaaggagaac
aagatgtttctttgaccatgactcagagtgggaaacccaagactccaaat
tccaattgaccgcttacactcagttagtaattctgccatccggacgtttg
aaggatgtccaattggatggtctcagtattctcgggggcaccacctctct
cccctgatttattccttgttatttatcttctcagatcattttactgggaa
aaaaaaaaccttgtttgctgccctggtagaactcagtcattttccccctc
ctagggtcccagcataagggtttggctcacttccacaacaaaactagcat
ttctgactctgcctgcatgctgtgcaatgaaaatagccacgaactggtca
tcaggaaacttggatttgcatcttctttctgctttatggcagcgagcagg
ggaaccccaactgctgaagttccatttgtgacatcctaagcaaacccttt
caaaaattctttcctttcctttttctaagtgtacctgggctcagtgcatc
agacctgagagcagacaatttggagagaaagctaaagctgccacacaagc
caccagggcagctgtaggaaacctcatttaaaaaaaaatctgcagtgcat
ttatctgtctgcagagccactgaccttgtactgtgaactgtgactatcca
tttatttccactcaagagtctggttcaggactgactacagtacaagcatt
ttctttggttcctgtgagaaatttgaggttcgcaagtgcttgctcccgat
tggcatcttgctgaccatgagtcgaaacataagctgtggcgtggactttt
ggagcacagaacggctgcaaatcaatcaaagcaaaggtcagctcatggcc
agaagcagactaccgaagcctcaccctgctgtgaactgacgtgacgttag
tccga
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaacttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgatttttgttaa
ttaggattttgtctctgtgccctctagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactccttcttggggtgaattttgcttcctttttttct
agagcttttaagatgtgttgtcaagctgctagtattgtgctctcttcccg
tttcttcatggaggcactcagagctatgagtttccctccttagaaatgct
ttcatttgtgtccaaaggtttgggtacgtggtggcttcaattttcattaa
actcctaaaagtcctttaatttctttctcatcccttccttggaccaaagg
taatcattgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_89887438_89888598
seq2: B6Ng01-286L22.b_51_1205 (reverse)

seq1  TCGGACTTACGTCACGTCAG-TCACAGCAGGGTGAGGCTCTGTTAGTCTG  49
      ||||||| |||||||||||| ||||||||||||||||||  | |||||||
seq2  TCGGACTAACGTCACGTCAGTTCACAGCAGGGTGAGGCTTCGGTAGTCTG  50

seq1  CCTTCTGGCCCCTGGAGCTTGACTTTTGCTTTGATTTGATTTTGCAGCCC  99
       |||||||  ||  |||| |||| |||||||||| |||| ||||||| ||
seq2  -CTTCTGG--CCATGAGC-TGACCTTTGCTTTGA-TTGA-TTTGCAG-CC  93

seq1  GTTCTGTGGCTCAAAAGTCCACG-CACAGCTTATTGTGTCGACTCATGGT  148
      ||||||||   |||||||||||| ||||||||| ||| ||||||||||||
seq2  GTTCTGTGCTCCAAAAGTCCACGCCACAGCTTA-TGTTTCGACTCATGGT  142

seq1  CAGCAAGATTGCCAATCGGGGAGCAAGCACTTGCGAACCTCAAATTTCTC  198
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  CAGCAAGA-TGCCAATC-GGGAGCAAGCACTTGCGAACCTCAAATTTCTC  190

seq1  ACA-GAACCAAAG-AAATGCTTGTACTGTAGTCAGTCCCTGAACCAGACT  246
      ||| ||||||||| |||||||||||||||||||||| |||||||||||||
seq2  ACAGGAACCAAAGAAAATGCTTGTACTGTAGTCAGT-CCTGAACCAGACT  239

seq1  CCTGAGTGGAAATAAATGGATAGTCACAGTTCACAGTACAAGGTCAGTGG  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTGGAAATAAATGGATAGTCACAGTTCACAGTACAAGGTCAGTGG  289

seq1  CTCTGCAGACAGAT-AATGCACTGCAGATTTTTTTTTAAATGAGGTTTCC  345
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGACAGATAAATGCACTGCAGATTTTTTTTTAAATGAGGTTTCC  339

seq1  TACAGCTGCCCTGGTGGCTTGTGTGGCAGCTTTAGCTTTCTCTCCAAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGCCCTGGTGGCTTGTGTGGCAGCTTTAGCTTTCTCTCCAAATT  389

seq1  GTCTGCTCTCAGGTCTGATGCACTGAGCCCAGGTACACTTAGAAAAAGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTCTCAGGTCTGATGCACTGAGCCCAGGTACACTTAGAAAAAGGA  439

seq1  AAGGAAAGAATTTTTGAAAGGGTTTGCTTAGGATGTCACAAATGGAACTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAATTTTTGAAAGGGTTTGCTTAGGATGTCACAAATGGAACTT  489

seq1  CAGCAGTTGGGGTTCCCCTGCTCGCTGCCATAAAGCAGAAAGAAGATGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTGGGGTTCCCCTGCTCGCTGCCATAAAGCAGAAAGAAGATGCA  539

seq1  AATCCAAGTTTCCTGATGACCAGTTCGTGGCTATTTTCATTGCACAGCAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGTTTCCTGATGACCAGTTCGTGGCTATTTTCATTGCACAGCAT  589

seq1  GCAGGCAGAGTCAGAAATGCTAGTTTTGTTGTGGAAGTGAGCCAAACCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGAGTCAGAAATGCTAGTTTTGTTGTGGAAGTGAGCCAAACCCT  639

seq1  TATGCTGGGACCCTAGGAGGGGGAAAATGACTGAGTTCTACCAGGGCAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGGGACCCTAGGAGGGGGAAAATGACTGAGTTCTACCAGGGCAGC  689

seq1  AAACAAGGTTTTTTTTTTCCCAGTAAAATGATCTGAGAAGATAAATAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGTTTTTTTTTTCCCAGTAAAATGATCTGAGAAGATAAATAACA  739

seq1  AGGAATAAATCAGGGGAGAGAGGTGGTGCCCCCGAGAATACTGAGACCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAATCAGGGGAGAGAGGTGGTGCCCCCGAGAATACTGAGACCAT  789

seq1  CCAATTGGACATCCTTCAAACGTCCGGATGGCAGAATTACTAACTGAGTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGGACATCCTTCAAACGTCCGGATGGCAGAATTACTAACTGAGTG  839

seq1  TAAGCGGTCAATTGGAATTTGGAGTCTTGGGTTTCCCACTCTGAGTCATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGGTCAATTGGAATTTGGAGTCTTGGGTTTCCCACTCTGAGTCATG  889

seq1  GTCAAAGAAACATCTTGTTCTCCTTCTGGGGCAATGCACTCTCTTGGGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAACATCTTGTTCTCCTTCTGGGGCAATGCACTCTCTTGGGAT  939

seq1  CCTTGGTTTTTACCAAGTTCCACACTTGTCTCTTTTTAACAAAGACAATC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTTTTACCAAGTTCCACACTTGTCTCTTTTTAACAAAGACAATC  989

seq1  ATCTTTTTCTGTATAGTTTACTTAACTAAACAAGAAAGAGACAACGTATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCTGTATAGTTTACTTAACTAAACAAGAAAGAGACAACGTATG  1039

seq1  GCTGTCTTTATAAAACAAGACTTTAATTTTTTTTCAGCCTAAAGAAAAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTTATAAAACAAGACTTTAATTTTTTTTCAGCCTAAAGAAAAAA  1089

seq1  GCCAGTGATCAGCTCTCCCTGCTTTGTTCCATAAGATCAGTTCATAAACA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGATCAGCTCTCCCTGCTTTGTTCCATAAGATCAGTTCATAAACA  1139

seq1  GTTCTATTCTGAATTC  1161
      ||||||||||||||||
seq2  GTTCTATTCTGAATTC  1155