MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-287A12
Chromosome	11 (Build37)
Map Location	47,177,887 - 47,343,665
singlet/doublet	doublet
Overlap gene	Sgcd
Upstream gene	Itk, OTTMUSG00000005491, Crsp9, LOC100039730, Havcr2, LOC210535, LOC675689, LOC435256, BC053393, Dppa1, EG237749, Timd2, LOC620678, Havcr1, Timd4
Downstream gene	LOC628753, LOC100039647
Link	Open Mouse BAC browser

Click to get alignment info.

name	Itk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16428 MGI:96621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000005491 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432552 MGI:3650836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crsp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66213 MGI:1913463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039730 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039730
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 37 ESTs, 3 Proteins pseudo : _no_value

name	Havcr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171285 MGI:2159682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC210535 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:210535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein

name	LOC675689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC435256 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435256
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	BC053393 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407814 MGI:3039605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dppa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:347708 MGI:2157522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG237749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237749 MGI:3646427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Timd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171284 MGI:2159681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 747 ESTs, 11 Proteins pseudo : _no_value

name	Havcr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171283 MGI:2159680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:276891 MGI:2445125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgcd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24052 MGI:1346525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 119 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039647 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039647
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Itk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119703750 GeneID:16428 MGI:96621
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IL2-inducible T-cell kinase transcript_id : NM_010583.2

name	OTTMUSG00000005491 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62000655 GeneID:432552 MGI:3650836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000005491 transcript_id : NM_001013783.1

name	Crsp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981285 GeneID:66213 MGI:1913463
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cofactor required for Sp1 transcriptional activation, subunit 9 transcript_id : NM_025426.2

name	Havcr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703359 GeneID:171285 MGI:2159682
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatitis A virus cellular receptor 2 transcript_id : NM_134250.1

name	LOC210535 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94390063 GeneID:210535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein product : hepatitis A virus cellular receptor 1-like transcript_id : XM_109910.4

name	LOC675689 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261859 GeneID:675689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to DPPA1 transcript_id : XM_001473179.1

name	BC053393 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802650 GeneID:407814 MGI:3039605
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC053393 transcript_id : NM_001025435.2

name	Dppa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342425 GeneID:347708 MGI:2157522
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmental pluripotency associated 1 transcript_id : NM_178247.2

name	EG237749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261861 GeneID:237749 MGI:3646427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG237749 transcript_id : XM_111219.7

name	Timd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386346 GeneID:171284 MGI:2159681
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell immunoglobulin and mucin domain containing 2 transcript_id : NM_134249.4

name	Havcr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527409 GeneID:171283 MGI:2159680
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatitis A virus cellular receptor 1 transcript_id : NM_134248.1

name	Timd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110624775 GeneID:276891 MGI:2445125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell immunoglobulin and mucin domain containing 4 transcript_id : NM_178759.4

name	Sgcd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377675 GeneID:24052 MGI:1346525
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcoglycan, delta (dystrophin-associated glycoprotein) transcript_id : NM_011891.3

name	Itk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119703751 CCDS:CCDS24575.1 GeneID:16428 MGI:96621
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : interleukin-2-inducible T cell kinase product : IL2-inducible T-cell kinase protein_id : NP_034713.2

name	OTTMUSG00000005491 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000656 CCDS:CCDS24576.1 GeneID:432552 MGI:3650836
definition	codon_start : 1 product : hypothetical protein LOC432552 protein_id : NP_001013805.1

name	Crsp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981286 GeneID:66213 MGI:1913463
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence ISS] GO_process : GO:0045941 - positive regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : cofactor required for Sp1 transcriptional activation, subunit 9, 33kDa product : cofactor required for Sp1 transcriptional activation, subunit 9 protein_id : NP_079702.2

name	Havcr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703360 GeneID:171285 MGI:2159682
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : T-cell immunoglobulin and mucin domain containing 3 product : hepatitis A virus cellular receptor 2 protein_id : NP_599011.1

name	LOC210535 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:20347292 GeneID:210535
definition	codon_start : 1 product : hypothetical protein LOC210535 protein_id : XP_109910.1

name	LOC675689 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261860 GeneID:675689
definition	codon_start : 1 product : similar to DPPA1 protein_id : XP_001473229.1

name	BC053393 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887609 CCDS:CCDS24580.1 GeneID:407814 MGI:3039605
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC407814 protein_id : NP_001020606.1

name	Dppa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30142691 CCDS:CCDS24581.1 GeneID:347708 MGI:2157522
definition	codon_start : 1 product : developmental pluripotency associated 1 protein_id : NP_839978.1

name	EG237749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261862 GeneID:237749 MGI:3646427
definition	codon_start : 1 product : similar to TIM1 protein_id : XP_111219.7

name	Timd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328516 CCDS:CCDS24582.1 GeneID:171284 MGI:2159681
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : T-cell immunoglobulin and mucin domain containing 2 protein_id : NP_599010.3

name	Havcr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527410 CCDS:CCDS24583.1 GeneID:171283 MGI:2159680
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : T-cell immunoglobulin and mucin domain containing 1 product : hepatitis A virus cellular receptor 1 protein_id : NP_599009.1

name	Timd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110624776 GeneID:276891 MGI:2445125
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : smuckler product : T-cell immunoglobulin and mucin domain containing 4 protein_id : NP_848874.3

name	Sgcd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755484 CCDS:CCDS24584.1 GeneID:24052 MGI:1346525
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0016012 - sarcoglycan complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016044 - membrane organization and biogenesis [Evidence TAS] codon_start : 1 note : sarcoglycan, delta (35kD dystrophin-associated glycoprotein); sarcoglycan delta (dystrophin-associated glycoprotein) product : sarcoglycan, delta (dystrophin-associated glycoprotein) protein_id : NP_036021.1

name	LOC435256 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435256
definition	number : 1 pseudo : _no_value

name	LOC100039647 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039647
definition	number : 1 pseudo : _no_value

name	LOC100039730 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261866 GeneID:100039730
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 37 ESTs, 3 Proteins product : hypothetical protein LOC100039730 pseudo : _no_value transcript_id : XR_031448.1

name	LOC620678 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261868 GeneID:620678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 747 ESTs, 11 Proteins product : similar to 60S ribosomal protein L7 pseudo : _no_value transcript_id : XR_031536.1

name	LOC628753 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261869 GeneID:628753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 119 ESTs, 8 Proteins product : similar to hCG2016250 pseudo : _no_value transcript_id : XR_031591.1

clone name	MSMg01-290D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270O02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-377H05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-118B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303L20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134D16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-338D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-193P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-096K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-063K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-211H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-064N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301B21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-445P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-287A12.b	B6Ng01-287A12.g
ACC	GA085067	GA085068
length	1,049	1,128
definition	B6Ng01-287A12.b	B6Ng01-287A12.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(47,177,887 - 47,178,948)	(47,342,531 - 47,343,665)
sequence	gaattcattgctcttcacaaggatgaaagtggttccatctgtgctttcat caacctcctaagtcaatgagagaggccaacagcaaacactcttatcagtt gaaactttagaagttgagttagttggcaggaagaaagcatggaggattcc attacagaaaacagagaccatcaacccactgtggccccagaaagccagtc ttgacaaggtgagaacaggaaggaaactagtttccaaaggagtcatagca accttcaggttgttgaacaccatgcttatgcccacgacttgagtgagccc agaaaagagaaagcactgagtttgtagagaatggatagctgccagtaaat ggatcacacatccttgacagagctagggtcaattgccgaacaacaagccc ctgtattttcctatttggaaatgagcatgatgcaaatcaagagagtgggg tgtaatgttttggtgatgcctcatgtcaacatttctggtaatatgaaaaa gtaaacccaaattacataattgcacaactcctaatgagtttttataaata gcaggcagaagttcctgtacaggctcattcatcgttttcagagctgattg tggcatgtgaaccattctggattatcttggcacatgcacaaccttctatt agccgtgacaattttgagcttcctgattttaaactatttgctgtgaaggg ttgttttcactcagccatattaacattagtcctggattattagtatctgg cacaacttgagaaatttttaacaaacttgtcactttgagatttgatgtaa taatcagtttttttttttacctcacaaaattcatccaggaaagtcaatga ctgtttacagcctaagaacattttcttttaaaatgaatatttggattgat tttaaagtgaggaatcatacagtttagcttccagagatttgggatatata aatcttaaacacttaattgaaattagataacgggcagacatttagaaacc catctcactcttagctttctcctggacactatttttctagacttaaaaa	gaattcctgcatgggttggtttcatacctaatctgatatagaacatattc cagtacaatggctttttccaatctttatataaatttatttatataaattt atataattttataatacatttataattttatattcacttacgggttattt tctggattcgtgttgttctgctagtccctagtctgaatttcaggggatgt tctccactatcccatttccaggctgccatgaacttgtgtgggcactttct gacttccccgttcatgaatcttctctcaattgggagttgctatcctatat gatggggggaagaagggttaattagacactgtgatctttacttatctaag tttttccaaatcaatgttctttgcttatgaataattttgattttatctta ggagaattctctgtgctttgaaaactcaaaggccaagaattgatttcttt tttttttcttttcatagtattttcttcctctccataagtagtaggtttca aggacacagctagtgcttcattgagagataagagcactgggcagaggctt attcacacgtcaaattatgtaatcatatttcattcattttacaacacacc cacacttacccactgacatccacaacacacacacacacacctacctacct acctaatggaatccaagcaagactaaataaaactgaaataaggtgccaaa aaggaccaggcacttacctaaattagggacttacctcatgaattgagtga aaatgttgcttgcgatgatgcccatcctcatccaggaattccccgataaa ttggggacaagagacaaaatgataattttagaagggtaattggatttgaa aacttgggtcctagctgtctgaacagttgggaatggattaggaaggtaag gcttttgctggagaagaagcgtgtcacctgaagcaagggcatttccagag tgtctaccctggcacttgccttcagaatatggactgtcaattgtcctgca ccaggtatttgtctgctgtcatacactctaagccttggatcctaagcaca taaatgcttgttcatgggtcctacacacaagaggaaatagctaaagagaa atagttgtgtctaaagcatgtttatcga
quality values	Open. Hide. 58 33 40 30 54 28 20 54 52 58 58 58 58 58 62 31 21 42 25 54 62 38 24 27 62 54 62 62 47 41 56 41 39 50 56 37 13 38 32 27 30 46 62 62 62 62 62 59 30 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 59 48 54 56 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 47 41 62 54 62 62 62 62 62 62 62 54 54 62 62 62 62 58 58 58 58 58 58 46 58 58 54 58 58 58 58 58 58 58 58 54 54 54 58 58 58 58 58 54 58 54 58 54 54 58 54 58 58 58 58 58 58 54 54 58 46 52 58 58 58 58 54 58 58 54 58 58 54 54 58 58 58 41 54 54 54 58 58 54 58 54 54 58 41 58 54 54 50 58 58 50 58 51 53 58 58 58 54 46 54 52 58 58 54 58 58 52 54 58 58 33 58 58 58 53 58 58 58 53 33 39 58 40 58 58 58 58 39 58 51 51 58 58 31 51 53 58 50 51 58 50 40 51 50 53 58 58 53 54 58 51 46 50 50 50 51 52 50 54 58 46 53 53 39 51 58 51 50 51 28 44 51 58 40 58 51 39 47 47 47 40 26 41 58 49 41 49 51 39 25 44 50 58 58 51 51 58 32 51 53 52 47 51 50 50 58 35 51 54 41 24 54 44 49 40 53 39 49 36 38 39 53 51 40 49 53 42 49 51 49 24 32 51 45 54 36 33 42 40 53 53 53 33 29 36 47 32 53 52 53 51 45 40 53 33 54 53 43 40 42 53 53 42 54 33 53 36 53 41 27 52 53 43 32 37 33 53 33 39 39 35 32 41 31 46 53 32 40 52 53 35 51 51 52 32 53 51 49 26 33 31 33 31 47 39 40 31 47 51 31 40 31 31 39 51 48 40 28 21 37 25 51 42 30 43 31 42 31 35 33 34 31 38 31 31 21 27 31 51 51 51 51 51 51 46 46 48 37 32 42 33 30 34 17 29 21 48 48 31 33 31 38 28 37 37 42 26 29 27 38 46 30 31 21 15 18 23 31 31 27 25 29 41 28 47 31 29 32 32 38 34 39 30 27 27 19 41 42 34 23 31 46 46 35 33 17 47 43 31 22 43 44 32 24 32 31 30 21 18 28 44 30 17 21 11 11 21 29 16 12 47 47 23 33 44 25 26 24 31 18 13 16 23 24 21 32 20 32 28 33 22 6 7 31 13 30 8 14 34 10 14 32 22 11 33 19 34 15 36 19 19 48 33 27 8 5 9 13 22 14 43 31 18 15 9 33 11 39 21 14 30 22 30 27 7 11 11 20 12 25 47 30 9 22 23 9 19 20 6 3 3 5 40 25 16 11 11 20 6 5 24 34 21 20 5 21 22 8 13 47 33 11 27 27 19 11 12 7 7 4 3 9 21 6 24 12 28 16 15 17 23 14 2 3 13 6 8 19 6 11 15 10 28 28 28 21 8 6 4 4 13 10 15 12 4 12 28 28 13	Open. Hide. 62 47 42 42 62 62 62 62 62 54 47 26 35 21 21 21 22 24 21 28 28 43 59 43 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 62 59 62 59 62 49 59 62 62 62 62 62 62 59 49 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 42 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 46 62 56 43 47 56 56 47 62 62 54 54 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 43 41 52 42 58 58 58 58 54 58 54 58 58 58 58 58 58 58 54 33 58 54 58 58 58 58 58 54 58 58 58 54 58 54 54 50 44 47 58 54 49 47 54 54 58 58 58 54 58 58 58 58 58 58 54 30 58 58 58 58 42 58 54 34 18 54 58 39 58 52 46 36 25 58 58 58 58 52 54 52 58 28 49 50 45 34 53 53 58 51 33 51 38 58 51 58 54 49 58 58 53 50 50 51 53 46 51 48 50 58 52 58 46 58 58 51 41 35 49 49 45 21 49 51 58 58 37 51 31 58 54 41 51 46 44 58 53 50 54 32 51 58 49 37 48 58 33 50 58 50 46 36 50 37 51 54 41 35 39 31 51 52 53 51 51 53 53 53 40 58 38 58 41 53 50 58 51 49 52 58 58 49 42 58 58 49 50 58 58 52 42 58 37 58 51 54 40 39 51 29 25 54 50 35 12 50 35 50 37 53 54 54 50 40 42 54 54 47 39 49 53 44 54 51 52 49 40 33 46 27 49 42 12 6 54 54 54 41 34 46 41 27 49 32 37 51 41 34 40 43 54 31 33 51 39 53 54 23 20 19 13 18 54 35 33 31 24 30 25 41 52 42 40 31 31 33 39 31 25 36 42 41 34 40 52 40 54 54 21 26 28 15 52 31 31 37 42 41 45 18 40 31 35 42 20 31 28 52 31 30 40 35 41 27 40 33 35 29 32 28 28 30 28 31 26 32 31 53 45 46 16 31 17 31 51 23 31 27 33 45 51 19 30 11 5 20 18 46 21 30 19 27 51 51 42 31 36 34 31 33 17 35 51 45 31 27 16 23 27 10 47 33 10 30 14 19 27 30 18 31 32 48 31 24 42 46 42 28 28 22 12 25 27 13 15 12 33 32 38 20 34 36 29 21 32 11 17 28 25 31 32 25 14 25 10 41 14 33 8 10 21 25 20 12 7 9 8 20 21 44 9 13 22 26 20 14 32 12 16 41 46 13 13 27 11 14 5 11 7 21 34 9 38 44 9 22 23 26 31 21 27 14 10 11 14 18 19 25 13 31 18 20 7 11 11 31 17 18 28 24 8 12 8 8 42 9 7 8 8 7 11 32 21 48 10 14 33 11 19 12 32 21 17 10 10 16 30 6 9 4 6 9 23 10 6 18 24 14 7 16 11 31 7 15 21 27 10 32 15 11 19 31 13 23 15 29 6 17 13 11 15 7 10 6 28 25 7 5 12 3 9 17 13 15 8 27 20 9 14 18 12 14 11 9 13 14 21 20 22 15 5 11 20 10 25 6 17 21 16 15 19 20 8 7 6 3 3 3 34 18 7 16 11 27 15 31 6 9 13 20 20 23 6 3 2 4 5 16 5 3 4 12 5 16 3 6 11 11 7 14 17 26 5 11 4 12 20 18 14 22 12 5 11 8 23 25 7 5 9 10 18 11 5 4 11 8 6 3 5 17 12 5 9 7 6 3 3 2 4 6 4 10 10 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_47177887_47178948
seq2: B6Ng01-287A12.b_46_1094

seq1  GAATTCATTGCTCTTCACAAGGATGAAAGTGGTTCCATCTGTGCTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTCTTCACAAGGATGAAAGTGGTTCCATCTGTGCTTTCAT  50

seq1  CAACCTCCTAAGTCAATGAGAGAGGCCAACAGCAAACACTCTTATCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCCTAAGTCAATGAGAGAGGCCAACAGCAAACACTCTTATCAGTT  100

seq1  GAAACTTTAGAAGTTGAGTTAGTTGGCAGGAAGAAAGCATGGAGGATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTAGAAGTTGAGTTAGTTGGCAGGAAGAAAGCATGGAGGATTCC  150

seq1  ATTACAGAAAACAGAGACCATCAACCCACTGTGGCCCCAGAAAGCCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGAAAACAGAGACCATCAACCCACTGTGGCCCCAGAAAGCCAGTC  200

seq1  TTGACAAGGTGAGAACAGGAAGGAAACTAGTTTCCAAAGGAGTCATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGGTGAGAACAGGAAGGAAACTAGTTTCCAAAGGAGTCATAGCA  250

seq1  ACCTTCAGGTTGTTGAACACCATGCTTATGCCCACGACTTGAGTGAGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGGTTGTTGAACACCATGCTTATGCCCACGACTTGAGTGAGCCC  300

seq1  AGAAAAGAGAAAGCACTGAGTTTGTAGAGAATGGATAGCTGCCAGTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGAAAGCACTGAGTTTGTAGAGAATGGATAGCTGCCAGTAAAT  350

seq1  GGATCACACATCCTTGACAGAGCTAGGGTCAATTGCCGAACAACAAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACACATCCTTGACAGAGCTAGGGTCAATTGCCGAACAACAAGCCC  400

seq1  CTGTATTTTCCTATTTGGAAATGAGCATGATGCAAATCAAGAGAGTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTTCCTATTTGGAAATGAGCATGATGCAAATCAAGAGAGTGGGG  450

seq1  TGTAATGTTTTGGTGATGCCTCATGTCAACATTTCTGGTAATATGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTTTTGGTGATGCCTCATGTCAACATTTCTGGTAATATGAAAAA  500

seq1  GTAAACCCAAATTACATAATTGCACAACTCCTAATGAGTTTTTATAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCCAAATTACATAATTGCACAACTCCTAATGAGTTTTTATAAATA  550

seq1  GCAGGCAGAAGTTCCTGTACAGGCTCATTCATCGTTTTCAGAGCTGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGAAGTTCCTGTACAGGCTCATTCATCGTTTTCAGAGCTGATTG  600

seq1  TGGCATGTGAACCATTCTGGATTATCTTGGCACATGCACAACCTTCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTGAACCATTCTGGATTATCTTGGCACATGCACAACCTTCTATT  650

seq1  AGCCGTGACAATTTTGAGCTTCCTGATTTTAAACTATTTGCTGTGAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTGACAATTTTGAGCTTCCTGATTTTAAACTATTTGCTGTGAAGGG  700

seq1  TTGTTTTCACTCAGCCATATTAACATTAGTCCTGGATTATTAGTATCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCACTCAGCCATATTAACATTAGTCCTGGATTATTAGTATCTGG  750

seq1  CACAACTTGAGAAATTTTTAACAAACTTGTCACTTTGAGATTTGATGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTGAGAAATTTTTAACAAACTTGTCACTTTGAGATTTGATGTAA  800

seq1  TAATCAGTTTTTTTTTTTACCTCACAAAATTCATCCAGGAAAGTCAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTTTTTTTTTTTACCTCACAAAATTCATCCAGGAAAGTCAATGA  850

seq1  CTGTTTACAGCCTAAGAACATTTTCTTTTAAAATGAATATTTGGATTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTACAGCCTAAGAACATTTTCTTTTAAAATGAATATTTGGATTGAT  900

seq1  TTTAAAGTGAGGAATCATACAGTTTAGCTTCCAGAGATTTGGGATATATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTGAGGAATCATACAGTTTAGCTTCCAGAGATTTGGGATATATA  950

seq1  AATCTTAAACAACTTTAATTGAAAATTAGATTAAAGGGGCAGACATTTAA  1000
      |||||||||||   ||||||| |||||||||  || |||||||||||| |
seq2  AATCTTAAACA--CTTAATTG-AAATTAGAT--AACGGGCAGACATTT-A  994

seq1  GAAAACCCCATCTCACTCTTAGCCTTTCTCCCTTGGGACAACTATTTTTC  1050
      ||||  |||||||||||||||| ||||||||    |||| ||||||||||
seq2  GAAA--CCCATCTCACTCTTAG-CTTTCTCC---TGGAC-ACTATTTTTC  1037

seq1  TAGACTTTAAAA  1062
      ||||||| ||||
seq2  TAGACTTAAAAA  1049

seq1: chr11_47342531_47343665
seq2: B6Ng01-287A12.g_70_1197 (reverse)

seq1  TCGATAAAACATGCTTTTATGACA-AACTA-TTCTC-TTAGCTATTTTCC  47
      ||||| |||||||||||   |||| ||||| ||||| ||||||| |||||
seq2  TCGAT-AAACATGCTTT--AGACACAACTATTTCTCTTTAGCTA-TTTCC  46

seq1  TCTTGGTGTGTTAAGAACACCATGACCAAAGCATTTAATTGTGCTTAGGA  97
      |||| ||||||  || || |||||| | |||||||||  |||||||||||
seq2  TCTT-GTGTGT--AGGAC-CCATGAAC-AAGCATTTA--TGTGCTTAGGA  89

seq1  TTCCCAAGGCTTAGAGTGTATGACAGCAGGACAAATACCTGGTTGCAGGG  147
      |  ||||||||||||||||||||||||| ||||||||||||| |||| ||
seq2  T--CCAAGGCTTAGAGTGTATGACAGCA-GACAAATACCTGG-TGCA-GG  134

seq1  ACAATTGACAGTCCATA-TCTGAA-GCAAGTGCCA-GGTAGAACACTCTG  194
      ||||||||||||||||| |||||| |||||||||| ||||| ||||||||
seq2  ACAATTGACAGTCCATATTCTGAAGGCAAGTGCCAGGGTAG-ACACTCTG  183

seq1  GAAATG-GCTTGCTTCA-GTGACACGCTTTCTTCTCCAGC-AAAGCCTTA  241
      ||||||  ||||||||| ||||||||| |||||||||||| |||||||||
seq2  GAAATGCCCTTGCTTCAGGTGACACGC-TTCTTCTCCAGCAAAAGCCTTA  232

seq1  -CTTCCTAATCCATT-CCAACTGTTCAGACAGCTAGGACCCAAGTTTTCA  289
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTTCCTAATCCATTCCCAACTGTTCAGACAGCTAGGACCCAAGTTTTCA  282

seq1  AATCCAATTACCCTTCTAAAATTATCATTTTGTCTCTTGTCCCCAATTTA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATTACCCTTCTAAAATTATCATTTTGTCTCTTGTCCCCAATTTA  332

seq1  TCGGGGAATTCCTGGATGAGGATGGGCATCATCGCAAGCAACATTTTCAC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGAATTCCTGGATGAGGATGGGCATCATCGCAAGCAACATTTTCAC  382

seq1  TCAATTCATGAGGTAAGTCCCTAATTTAGGTAAGTGCCTGGTCCTTTTTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCATGAGGTAAGTCCCTAATTTAGGTAAGTGCCTGGTCCTTTTTG  432

seq1  GCACCTTATTTCAGTTTTATTTAGTCTTGCTTGGATTCCATTAGGTAGGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTATTTCAGTTTTATTTAGTCTTGCTTGGATTCCATTAGGTAGGT  482

seq1  AGGTAGGTGTGTGTGTGTGTGTTGTGGATGTCAGTGGGTAAGTGTGGGTG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGTGTGTGTGTGTGTGTTGTGGATGTCAGTGGGTAAGTGTGGGTG  532

seq1  TGTTGTAAAATGAATGAAATATGATTACATAATTTGACGTGTGAATAAGC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAAAATGAATGAAATATGATTACATAATTTGACGTGTGAATAAGC  582

seq1  CTCTGCCCAGTGCTCTTATCTCTCAATGAAGCACTAGCTGTGTCCTTGAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCAGTGCTCTTATCTCTCAATGAAGCACTAGCTGTGTCCTTGAA  632

seq1  ACCTACTACTTATGGAGAGGAAGAAAATACTATGAAAAGAAAAAAAAAAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTACTTATGGAGAGGAAGAAAATACTATGAAAAGAAAAAAAAAAG  682

seq1  AAATCAATTCTTGGCCTTTGAGTTTTCAAAGCACAGAGAATTCTCCTAAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATTCTTGGCCTTTGAGTTTTCAAAGCACAGAGAATTCTCCTAAG  732

seq1  ATAAAATCAAAATTATTCATAAGCAAAGAACATTGATTTGGAAAAACTTA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCAAAATTATTCATAAGCAAAGAACATTGATTTGGAAAAACTTA  782

seq1  GATAAGTAAAGATCACAGTGTCTAATTAACCCTTCTTCCCCCCATCATAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTAAAGATCACAGTGTCTAATTAACCCTTCTTCCCCCCATCATAT  832

seq1  AGGATAGCAACTCCCAATTGAGAGAAGATTCATGAACGGGGAAGTCAGAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCAACTCCCAATTGAGAGAAGATTCATGAACGGGGAAGTCAGAA  882

seq1  AGTGCCCACACAAGTTCATGGCAGCCTGGAAATGGGATAGTGGAGAACAT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCACACAAGTTCATGGCAGCCTGGAAATGGGATAGTGGAGAACAT  932

seq1  CCCCTGAAATTCAGACTAGGGACTAGCAGAACAACACGAATCCAGAAAAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAATTCAGACTAGGGACTAGCAGAACAACACGAATCCAGAAAAT  982

seq1  AACCCGTAAGTGAATATAAAATTATAAATGTATTATAAAATTATATAAAT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGTAAGTGAATATAAAATTATAAATGTATTATAAAATTATATAAAT  1032

seq1  TTATATAAATAAATTTATATAAAGATTGGAAAAAGCCATTGTACTGGAAT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAATAAATTTATATAAAGATTGGAAAAAGCCATTGTACTGGAAT  1082

seq1  ATGTTCTATATCAGATTAGGTATGAAACCAACCCATGCAGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTATATCAGATTAGGTATGAAACCAACCCATGCAGGAATTC  1128

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Alignment Information