BAC Information

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BAC

Clone NameB6Ng01-288M07
Chromosome11 (Build37)
Map Location 66,931,856 - 67,093,970
singlet/doubletdoublet
Overlap geneMyh2, Myh1, Myh4, Myh8
Upstream geneDnahc9, Gm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3
Downstream geneMyh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288M07.bB6Ng01-288M07.g
ACCGA086348GA086349
length1,015916
definitionB6Ng01-288M07.b B6Ng01-288M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,931,856 - 66,932,866)(67,093,063 - 67,093,970)
sequence
gaattcactggatatgcatattccctgagacgcgaagacttgcattgttt
atatggggaggcagatgtgatgctcggctcttgtcccatacattgacaca
tgcaaatttggcaggaagggtttattaaagagttaagagagaaagggctg
gcaagatggcgcatcagataaaaactctccttctgcaaacctgattatct
gagttcaaacctggaacacacggacaggggaaagagtcttctgatgtcca
cacacaagctttagtacatagacacccacacatatacatctgacacacag
cccacagaaacacatcacacacacacacacacacacacacacacacacac
acacacacacaccatactcacactttacaaaaacacgttacacacatgca
cacacatatacaccacactcacaacaaatacaaaattttttaaagagttg
agaaaacaaaattcaattaaaatagttacatgagctagatacgttaagaa
agtgtttagtttaataaaacagccttgttttttttccccaaatcatgatg
ctttaaaacctttttatttcttgaatttgtaatttattacttgaaaatgt
aatgacacatataacctgcattcattggacaactgaacggtattaaagga
gcttggtgacctcctatctctcactccaatccttccaactccacaagtta
gccaaggcgagcagctcctcgcctttatccttcttctctttctttaaaaa
aaaaaattcttaaaagttgttcttggaaattttcacaccaattaaaattt
tctgagtaggaaaaaatgttttcttttttttcccccagtacccagtcatt
tttgaaaaaatgcgcaagggaattaaaccaagataaaataagaatagcta
agtgggcatgcgtctccaattcggcttgaacagaccttgtatctctcaaa
tcctggagtcaaagatttaggctagactcgacttgctagcatacctgtgg
agatgtgtggtgtgt
gaattccagagtgtccccgttcacatcctaaagtggagatgactgccgga
aagagcaaatgtcatggctgtggttgttgtttggaaatggcaagtcccat
gaggcacgggtatcttataataagactgggatgagctccgtttgcccatc
ccaattgtatgtgcacatccctataaacagatgccccactcacccgtcag
catgaactggtaggcgttgtcagagatggagaagatgtggggtggggcct
cctggcgctttttgcctcggtaggctgccaccacctcagggttgtacacc
ggcagccacttgtaggggttgacggtgacacagaagaggcctgagtaggt
ctaaggaaaagatcagaaaagtcaatctagtgcctcctgtttcatttttt
ttactataaataaatgggctaaagggggctctcacatagatcatccaggc
tgcataacgctctttgaggttgtacagcactccgggctcatggaggtggg
tcatcatggccatgtcctcgatcttgtcatatttgggagggttcatgggg
aagacttgatcttccttgacggtgagagtctggtaaggaagcagggtggt
ttgagatagggtttatgtctgcctgttcattttggttctaaagctactac
tgagcacactttgtttgcttcgaatggttattcgagtgactttttaaagg
cctgaacacatttattttcaggtctgatgctaacaaaatctgtttcctgt
gataatgtatgagttagggcttgttattgacacatttcatgtgtacaaac
tcaggaggtttaagcataattgtttttcacacagccatgcagagtgcata
tgttctattccacctagcgcttctatgtaccaacaactgcctagtttccc
ctgttgtatacccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66931856_66932866
seq2: B6Ng01-288M07.b_43_1057

seq1  GAATTCACTGGATATGCATATTCCCTGAGACGCGAAGACTTGCATTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATATGCATATTCCCTGAGACGCGAAGACTTGCATTGTTT  50

seq1  ATATGGGGAGGCAGATGTGATGCTCGGCTCTTGTCCCATACATTGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGGAGGCAGATGTGATGCTCGGCTCTTGTCCCATACATTGACACA  100

seq1  TGCAAATTTGGCAGGAAGGGTTTATTAAAGAGTTAAGAGAGAAAGGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTTGGCAGGAAGGGTTTATTAAAGAGTTAAGAGAGAAAGGGCTG  150

seq1  GCAAGATGGCGCATCAGATAAAAACTCTCCTTCTGCAAACCTGATTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATGGCGCATCAGATAAAAACTCTCCTTCTGCAAACCTGATTATCT  200

seq1  GAGTTCAAACCTGGAACACACGGACAGGGGAAAGAGTCTTCTGATGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAACCTGGAACACACGGACAGGGGAAAGAGTCTTCTGATGTCCA  250

seq1  CACACAAGCTTTAGTACATAGACACCCACACATATACATCTGACACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGCTTTAGTACATAGACACCCACACATATACATCTGACACACAG  300

seq1  CCCACAGAAACACATCACACACACACACACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGAAACACATCACACACACACACACACACACACACACACACACAC  350

seq1  ACACACACACACCATACTCACACTTTACAAAAACACGTTACACACATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACCATACTCACACTTTACAAAAACACGTTACACACATGCA  400

seq1  CACACATATACACCACACTCACAACAAATACAAAATTTTTTAAAGAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATACACCACACTCACAACAAATACAAAATTTTTTAAAGAGTTG  450

seq1  AGAAAACAAAATTCAATTAAAATAGTTACATGAGCTAGATACGTTAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAAATTCAATTAAAATAGTTACATGAGCTAGATACGTTAAGAA  500

seq1  AGTGTTTAGTTTAATAAAACAGCCTTGTTTTTTTTCCCCAAATCATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTAGTTTAATAAAACAGCCTTGTTTTTTTTCCCCAAATCATGATG  550

seq1  CTTTAAAACCTTTTTATTTCTTGAATTTGTAATTTATTACTTGAAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAACCTTTTTATTTCTTGAATTTGTAATTTATTACTTGAAAATGT  600

seq1  AATGACACATATAACCTGCATTCATTGGACAACTGAACGGTATTAAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACATATAACCTGCATTCATTGGACAACTGAACGGTATTAAAGGA  650

seq1  GCTTGGTGACCTCCTATCTCTCACTCCAATCCTTCCAACTCCACAAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGACCTCCTATCTCTCACTCCAATCCTTCCAACTCCACAAGTTA  700

seq1  GCCAAGGCGAGCAGCTCCTCGCCTTTATCCTTCTTCTCTTTCTTT-AAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCCAAGGCGAGCAGCTCCTCGCCTTTATCCTTCTTCTCTTTCTTTAAAAA  750

seq1  AAAAAATTCTTAAAAGTTGTTCTTGGAAATTTTCAAACCAATTAAAATTT  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAAATTCTTAAAAGTTGTTCTTGGAAATTTTCACACCAATTAAAATTT  800

seq1  TCTGAGTAGGAAAAAATGTTTTCTTTTTTTTCCCCCAGTACCCCAGTCAT  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGAGTAGGAAAAAATGTTTTCTTTTTTTTCCCCCAGTA-CCCAGTCAT  849

seq1  TTTTGAAAAAATGCGCAAGGGAATTAAACCAAGATAAAATAAGAATAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAAATGCGCAAGGGAATTAAACCAAGATAAAATAAGAATAGCT  899

seq1  AAGTGGGCATGCGTTTCTAATTCGGCTTGAACAGACCTTGTATCTCTCAA  949
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  AAGTGGGCATGCGTCTCCAATTCGGCTTGAACAGACCTTGTATCTCTCAA  949

seq1  ATCCT-GAGTCAAAGATTTAGGCTAGACTCGACTTGCTAGCATACGTGTG  998
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCCTGGAGTCAAAGATTTAGGCTAGACTCGACTTGCTAGCATACCTGTG  999

seq1  ----TGTGTGTGTGTGT  1011
          |||||| ||||||
seq2  GAGATGTGTG-GTGTGT  1015

seq1: chr11_67093063_67093970
seq2: B6Ng01-288M07.g_72_987 (reverse)

seq1  TCTGGGTATACAACAGGGGAA--GTGGCAGTTGCTGGTTCATAG-AGGGC  47
      |||||||||||||||||||||    |||||||| |||| ||||| || ||
seq2  TCTGGGTATACAACAGGGGAAACTAGGCAGTTGTTGGTACATAGAAGCGC  50

seq1  TAGGTGGACTTGATCA-ATGCACACTGCATGGGTGTCTGAAAAACAATCA  96
      |||||||| | || || |||||| |||||||| ||| ||||||||||| |
seq2  TAGGTGGAATAGAACATATGCACTCTGCATGGCTGTGTGAAAAACAATTA  100

seq1  TGC-TAAACCTCCTGAATTTGTACA-ATTAAATGTGTCAATAAAAAGCCC  144
      ||| |||||||||||| |||||||| || |||||||||||||| ||||||
seq2  TGCTTAAACCTCCTGAGTTTGTACACATGAAATGTGTCAATAACAAGCCC  150

seq1  TAACTCCTACATTATCACAGGAAACAGATTTTGTTAGCATCAGACCTGAA  194
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCATACATTATCACAGGAAACAGATTTTGTTAGCATCAGACCTGAA  200

seq1  AATAAATGTGCTCAGGCCTTT-AAAAGTCAC-CGAATAACCATACGAAGC  242
      |||||||||| |||||||||| ||||||||| ||||||||||| ||||||
seq2  AATAAATGTGTTCAGGCCTTTAAAAAGTCACTCGAATAACCATTCGAAGC  250

seq1  AAACAAAGTGTGCTCAGTTGTAGCTTTAGAACCAAAATGAACAGGCAGAC  292
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAACAAAGTGTGCTCAGTAGTAGCTTTAGAACCAAAATGAACAGGCAGAC  300

seq1  ATAAACCCTATCTCAAACCACCCTGCTTCCTTACCAGACTCTCACCGTCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCCTATCTCAAACCACCCTGCTTCCTTACCAGACTCTCACCGTCA  350

seq1  AGGAAGATCAAGTCTTCCCCATGAACCCTCCCAAATATGACAAGATCGAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATCAAGTCTTCCCCATGAACCCTCCCAAATATGACAAGATCGAG  400

seq1  GACATGGCCATGATGACCCACCTCCATGAGCCCGGAGTGCTGTACAACCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCCATGATGACCCACCTCCATGAGCCCGGAGTGCTGTACAACCT  450

seq1  CAAAGAGCGTTATGCAGCCTGGATGATCTATGTGAGAGCCCCCTTTAGCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCGTTATGCAGCCTGGATGATCTATGTGAGAGCCCCCTTTAGCC  500

seq1  CATTTATTTATAGTAAAAAAAATGAAACAGGAGGCACTAGATTGACTTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTATAGTAAAAAAAATGAAACAGGAGGCACTAGATTGACTTTT  550

seq1  CTGATCTTTTCCTTAGACCTACTCAGGCCTCTTCTGTGTCACCGTCAACC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTTTCCTTAGACCTACTCAGGCCTCTTCTGTGTCACCGTCAACC  600

seq1  CCTACAAGTGGCTGCCGGTGTACAACCCTGAGGTGGTGGCAGCCTACCGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAGTGGCTGCCGGTGTACAACCCTGAGGTGGTGGCAGCCTACCGA  650

seq1  GGCAAAAAGCGCCAGGAGGCCCCACCCCACATCTTCTCCATCTCTGACAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAAGCGCCAGGAGGCCCCACCCCACATCTTCTCCATCTCTGACAA  700

seq1  CGCCTACCAGTTCATGCTGACGGGTGAGTGGGGCATCTGTTTATAGGGAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTACCAGTTCATGCTGACGGGTGAGTGGGGCATCTGTTTATAGGGAT  750

seq1  GTGCACATACAATTGGGATGGGCAAACGGAGCTCATCCCAGTCTTATTAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATACAATTGGGATGGGCAAACGGAGCTCATCCCAGTCTTATTAT  800

seq1  AAGATACCCGTGCCTCATGGGACTTGCCATTTCCAAACAACAACCACAGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACCCGTGCCTCATGGGACTTGCCATTTCCAAACAACAACCACAGC  850

seq1  CATGACATTTGCTCTTTCCGGCAGTCATCTCCACTTTAGGATGTGAACGG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACATTTGCTCTTTCCGGCAGTCATCTCCACTTTAGGATGTGAACGG  900

seq1  GGACACTCTGGAATTC  908
      ||||||||||||||||
seq2  GGACACTCTGGAATTC  916