BAC Information

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BAC

Clone NameB6Ng01-290M03
Chromosome11 (Build37)
Map Location 19,642,451 - 19,756,126
singlet/doubletdoublet
Overlap geneLOC665868
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1
Downstream geneLOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290M03.bB6Ng01-290M03.g
ACCGA087820GA087821
length334974
definitionB6Ng01-290M03.b B6Ng01-290M03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,642,451 - 19,642,784)(19,755,486 - 19,756,126)
sequence
tccccttacctaggaagaaaggctgtccatctagccactctatgtaagta
agtcttgtactggataccaggagcctttgtttagagaagaggaaagactg
gaacacagaagtggaaagaagactggcccatcttcttgctcaagcagttg
tctccaccgcctctttcctctggcagggggcagaagcactttacctctcc
tgtgaagagctcaggctaacttgaaccaaatgggggtgtaattcacctca
gtggcaaagagcatgcgcaaaatgtccgccgttcagtcaccaccagctaa
aaaacaaaaagatagaggaaggagaagtaggagg
gaattcactggcatcttgactgcaataagtcaatacgtttgtagtcagtc
ttgttactgagcaatactggaaatagggaaagcagagtacttgtgcagag
agagtatctatttcccctttgtgacttttgtattttgggagtgaaatggc
ctagggagacagtaaatttgttctatagaccacagagatcttaaacttat
gatcccactgcctcaacctctcaagtagctggagattacaggagtgtacc
atcaagtctggcctcttctgtttttatgtagaaatagattttttaccgaa
gcacaatgccaccccgctaaatctcctataaggccaacctgccttgtggc
tagaaatagcttctggccaacaggatggtagatatggtgtgtgtgtcctc
caaaacatacctttgaagggggcactacacattctgaacttctccacctt
taccctatggcaaggacagatttgggccttattatagacgtcttagactg
ggcacagacctaagaactgttgctctgaattttaattgggcccccaagag
ctggttgtccacatgtagacccaaatgacactatgtgaccttgtccccaa
gttatttctgattggtgaataaagatgcttataccctatagttgggcaga
attgagataggcagggctggagttcccggccttgaggtcagaggagacca
ggaggagagagaggagaaagaggccatgattaggtcaacaaagcatggcc
ccaaggactggccaattggaggtaagagcagcccagataagacgtagtaa
gtaatagcttggagttatcacaggaaagtgggtttctaatagcatagaag
gtaatatctgcccagctctagtgctgagtaaggcttattgtaaataataa
agttgtgtgtgtcatttatctgggaaacccaaatgattcaaaagtgaagg
tagaagccccagaattgaaatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19642451_19642784
seq2: B6Ng01-290M03.b_55_388

seq1  TCCCCTTACCTAGGAAGAAAGGCTGTCCATCTAGCCACTCTATGTAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTACCTAGGAAGAAAGGCTGTCCATCTAGCCACTCTATGTAAGTA  50

seq1  AGTCTTGTACTGGATACCAGGAGCCTTTGTTTAGAGAAGAGGAAAGACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTACTGGATACCAGGAGCCTTTGTTTAGAGAAGAGGAAAGACTG  100

seq1  GAACACAGAAGTGGAAAGAAGACTGGCCCATCTTCTTGCTCAAGCAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAGAAGTGGAAAGAAGACTGGCCCATCTTCTTGCTCAAGCAGTTG  150

seq1  TCTCCACCGCCTCTTTCCTCTGGCAGGGGGCAGAAGCACTTTACCTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCGCCTCTTTCCTCTGGCAGGGGGCAGAAGCACTTTACCTCTCC  200

seq1  TGTGAAGAGCTCAGGCTAACTTGAACCAAATGGGGGTGTAATTCACCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAGCTCAGGCTAACTTGAACCAAATGGGGGTGTAATTCACCTCA  250

seq1  GTGGCAAAGAGCATGCGCAAAATGTCCGCCGTTCAGTCACCACCAGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAAGAGCATGCGCAAAATGTCCGCCGTTCAGTCACCACCAGCTAA  300

seq1  AAAACAAAAAGATAGAGGAAGGAGAAGTAGGAGG  334
      ||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAGATAGAGGAAGGAGAAGTAGGAGG  334

seq1: chr11_19755486_19756126
seq2: B6Ng01-290M03.g_69_709 (reverse)

seq1  CTATAGGGTATAAGCATCTTTATTCACCAATCAGAAATAACTTGGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGGTATAAGCATCTTTATTCACCAATCAGAAATAACTTGGGGACA  50

seq1  AGGTCACATAGTGTCATTTGGGTCTACATGTGGACAACCAGCTCTTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACATAGTGTCATTTGGGTCTACATGTGGACAACCAGCTCTTGGGG  100

seq1  GCCCAATTAAAATTCAGAGCAACAGTTCTTAGGTCTGTGCCCAGTCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATTAAAATTCAGAGCAACAGTTCTTAGGTCTGTGCCCAGTCTAAG  150

seq1  ACGTCTATAATAAGGCCCAAATCTGTCCTTGCCATAGGGTAAAGGTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTATAATAAGGCCCAAATCTGTCCTTGCCATAGGGTAAAGGTGGAG  200

seq1  AAGTTCAGAATGTGTAGTGCCCCCTTCAAAGGTATGTTTTGGAGGACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGAATGTGTAGTGCCCCCTTCAAAGGTATGTTTTGGAGGACACA  250

seq1  CACACCATATCTACCATCCTGTTGGCCAGAAGCTATTTCTAGCCACAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCATATCTACCATCCTGTTGGCCAGAAGCTATTTCTAGCCACAAGG  300

seq1  CAGGTTGGCCTTATAGGAGATTTAGCGGGGTGGCATTGTGCTTCGGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGGCCTTATAGGAGATTTAGCGGGGTGGCATTGTGCTTCGGTAAA  350

seq1  AAATCTATTTCTACATAAAAACAGAAGAGGCCAGACTTGATGGTACACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTTCTACATAAAAACAGAAGAGGCCAGACTTGATGGTACACTC  400

seq1  CTGTAATCTCCAGCTACTTGAGAGGTTGAGGCAGTGGGATCATAAGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATCTCCAGCTACTTGAGAGGTTGAGGCAGTGGGATCATAAGTTTA  450

seq1  AGATCTCTGTGGTCTATAGAACAAATTTACTGTCTCCCTAGGCCATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGTGGTCTATAGAACAAATTTACTGTCTCCCTAGGCCATTTCA  500

seq1  CTCCCAAAATACAAAAGTCACAAAGGGGAAATAGATACTCTCTCTGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAAATACAAAAGTCACAAAGGGGAAATAGATACTCTCTCTGCACA  550

seq1  AGTACTCTGCTTTCCCTATTTCCAGTATTGCTCAGTAACAAGACTGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTGCTTTCCCTATTTCCAGTATTGCTCAGTAACAAGACTGACTA  600

seq1  CAAACGTATTGACTTATTGCAGTCAAGATGCCAGTGAATTC  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTATTGACTTATTGCAGTCAAGATGCCAGTGAATTC  641