BAC Information

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BAC

Clone NameB6Ng01-291A03
Chromosome11 (Build37)
Map Location 7,052,535 - 7,053,584
singlet/doubletsinglet
Overlap geneAdcy1
Upstream geneNudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream geneLOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291A03.bB6Ng01-291A03.g
ACCGA088007GA088008
length1,1901,036
definitionB6Ng01-291A03.b B6Ng01-291A03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttcttaatagggttatttgatt
ttctggagttcatcttcttgagttctttaggatattagtcccctatctga
tttaggataggtaaagatcctttcccaatctgttggtggcctttttgtct
tattgacagtgtcttttgccttacagaagctttgcaattttatgaggtcc
catttgtagattcttgatcttacagcacaagccattgttgttctgttcag
gaattttcccctgtgcccatacctttgaggcttttccccactttctcctc
tataagtttaagggtctctggttttatgtggagttctttaatccacttag
gcttgagcttagtacaaggagataaaaatgaatcaattcttctacatgcc
aaccaccagttgtgccagcaccatttgttgaaaatgctgtcttttttttc
ccactggattgttttagctcccttgtcaaagatcaagtgaccataggtgt
gtgggttcatttctgggtcttcaattttatcccattggtctacctgtctg
tcattgtaccagtaccatgcagtttttttttatcacaattgctctgtagt
acagctttaggtcaggcatggtgattccaccagaggttcttttatcattg
agaatagcttttgctatcctaggtttttttgttattccagatgaatttgc
aaaattttctctctaattctgtgaagaattgagttggaattttgatgggg
attgcattgaatctgtagattgcttttggcaagatagccatttttactat
attgatcctgccaatccatgagcatgggagatctttccatcttttgagat
cttctttgatttctttcttcagagacttgaggttcttatcatacagatct
ttcacttccttagagtcacgccaaggtattttatattatttgtgactatt
gtgaagggtgtgtttctttatttctttctcagcctgttatcctttgtgta
gagaaagaccactgatttgttgagtaattttatatctagtacttcctgat
gctgttatcaggtttggagttctctggtggatttagatcacttctataca
ttcattcactgcatggaattttgactctcttagagtgtttctaagatcac
acatgatatacatgcaatctcccggaatacaatcctccat
gaattcattgaaaataatgttggttgctgggcagagcacacctttaaccc
caacacttgggaggcagagggaggtggatctctgagttcgaggccagcct
ggtcctcagagtgaattccaggacagccagggctacacagaaaaatcctg
gcttgaaaaagaaaataatgttggggtaaaattatgctaagagacagaga
atgtcaccaagggcaaagcaaagcctgtttgtttatgcagggttgtgtag
ccaacgtggtatccaaaaataattaacccggctagtgtttgtccggacaa
tgaggcaatagtctgaggtgatctcgtgtctctgtgacctgactaaatac
ccggagggcaaacagacaaagtcctgaaagttccatgttttgctggggtt
acaggaaagcaaggtgacgttttttgttgaatgtctatggaaaaaaaaaa
tgtgtcagtgtgttccacttagcaacccttccaccatgacacgatcgcat
gaaggctacatgtgagggaatgcatttgtgccctgcacttcctgaaaggt
ccctatgtgatgaatggcgggagagagtgtggctggatggaaagtcacat
gagtcaataacacttaactactgaatttaacaacaaatgttggaatttaa
taatcaaagccaagagaaggccatgtcaatctatacgagaaaaatatctt
caaagggatgagcactgcccccctccaaaggaactcatagtcaggcctca
tttccacttgcttcgactgtacagccaactggataccctagcaaatcccc
acctcattgtgccaagaatcctggccttcctgcctcatcctgtgtacatt
attctctagtacatacaaggtcgctatgagacctgaaacccaacggtgat
ggcaggtcagtggagcagagcagcagccagctgggtacagtggacgacag
tcgagtagacaagacacgatcgatgctacactgcatagactctcttccat
cactgcgtgactcgggcaatgcaactgccaagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7052535_7053584
seq2: B6Ng01-291A03.g_68_1103 (reverse)

seq1  GAGACCTGGCAGTTGCATTTTGCCCGAGTCACGCCAGGTGATGGGAAGAG  50
      ||||| |||||||||||  |||||||||||||||   ||||| |||||||
seq2  GAGACTTGGCAGTTGCA--TTGCCCGAGTCACGC--AGTGAT-GGAAGAG  45

seq1  AGTCTATGGCAGTGGTAGCATCGATCGTGGTCTTTGTTCTACTCGACTGT  100
      ||||||| ||||| |||||||||||||| |||||   |||||||||||||
seq2  AGTCTAT-GCAGT-GTAGCATCGATCGT-GTCTT--GTCTACTCGACTGT  90

seq1  CCGTCCACTGTAACCCAGCTGGCTGCCTGCTCTGCTCCACTGACCCTGCC  150
       |||||||||| ||||||||||||| ||||||||||||||||| ||||||
seq2  -CGTCCACTGT-ACCCAGCTGGCTG-CTGCTCTGCTCCACTGA-CCTGCC  136

seq1  ATCACCGTTGGGTTTCAGGTCTCATAGCGACCTTGTATGTACTAGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCGTTGGGTTTCAGGTCTCATAGCGACCTTGTATGTACTAGAGAAT  186

seq1  AATGTACACAGGATGAGGCAGGAAGGCCAGGATTCTTGGCACAATGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACACAGGATGAGGCAGGAAGGCCAGGATTCTTGGCACAATGAGGT  236

seq1  GGGGATTTGCTAGGGTATCCAGTTGGCTGTACAGTCGAAGCAAGTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTTGCTAGGGTATCCAGTTGGCTGTACAGTCGAAGCAAGTGGAAA  286

seq1  TGAGGCCTGACTATGAGTTCCTTTGGAGGGGGGCAGTGCTCATCCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTGACTATGAGTTCCTTTGGAGGGGGGCAGTGCTCATCCCTTTG  336

seq1  AAGATATTTTTCTCGTATAGATTGACATGGCCTTCTCTTGGCTTTGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTTCTCGTATAGATTGACATGGCCTTCTCTTGGCTTTGATTA  386

seq1  TTAAATTCCAACATTTGTTGTTAAATTCAGTAGTTAAGTGTTATTGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCCAACATTTGTTGTTAAATTCAGTAGTTAAGTGTTATTGACTC  436

seq1  ATGTGACTTTCCATCCAGCCACACTCTCTCCCGCCATTCATCACATAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTTTCCATCCAGCCACACTCTCTCCCGCCATTCATCACATAGGG  486

seq1  ACCTTTCAGGAAGTGCAGGGCACAAATGCATTCCCTCACATGTAGCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAGGAAGTGCAGGGCACAAATGCATTCCCTCACATGTAGCCTTC  536

seq1  ATGCGATCGTGTCATGGTGGAAGGGTTGCTAAGTGGAACACACTGACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGATCGTGTCATGGTGGAAGGGTTGCTAAGTGGAACACACTGACACA  586

seq1  TTTTTTTTTTCCATAGACATTCAACAAAAAACGTCACCTTGCTTTCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCCATAGACATTCAACAAAAAACGTCACCTTGCTTTCCTGT  636

seq1  AACCCCAGCAAAACATGGAACTTTCAGGACTTTGTCTGTTTGCCCTCCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGCAAAACATGGAACTTTCAGGACTTTGTCTGTTTGCCCTCCGG  686

seq1  GTATTTAGTCAGGTCACAGAGACACGAGATCACCTCAGACTATTGCCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAGTCAGGTCACAGAGACACGAGATCACCTCAGACTATTGCCTCA  736

seq1  TTGTCCGGACAAACACTAGCCGGGTTAATTATTTTTGGATACCACGTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCGGACAAACACTAGCCGGGTTAATTATTTTTGGATACCACGTTGG  786

seq1  CTACACAACCCTGCATAAACAAACAGGCTTTGCTTTGCCCTTGGTGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAACCCTGCATAAACAAACAGGCTTTGCTTTGCCCTTGGTGACAT  836

seq1  TCTCTGTCTCTTAGCATAATTTTACCCCAACATTATTTTCTTTTTCAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTTAGCATAATTTTACCCCAACATTATTTTCTTTTTCAAGC  886

seq1  CAGGATTTTTCTGTGTAGCCCTGGCTGTCCTGGAATTCACTCTGAGGACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTTTCTGTGTAGCCCTGGCTGTCCTGGAATTCACTCTGAGGACC  936

seq1  AGGCTGGCCTCGAACTCAGAGATCCACCTCCCTCTGCCTCCCAAGTGTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTCGAACTCAGAGATCCACCTCCCTCTGCCTCCCAAGTGTTG  986

seq1  GGGTTAAAGGTGTGCTCTGCCCAGCAACCAACATTATTTTCAATGAATTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAAGGTGTGCTCTGCCCAGCAACCAACATTATTTTCAATGAATTC  1036