BAC Information

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BAC

Clone NameB6Ng01-292F18
Chromosome11 (Build37)
Map Location 24,540,881 - 24,541,991
singlet/doubletsinglet
Overlap genenone
Upstream genePex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282, 5730522E02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292F18.bB6Ng01-292F18.g
ACCGA089021GA089022
length1,0881,099
definitionB6Ng01-292F18.b B6Ng01-292F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaatgtacc
acattttctgtatctattcttttgctgagggacatctgggttctttccag
catcttgctattataaataaggctgctatggacatagtggagcatgtgca
cttattacaagctggaacatcttctgggtatatgccaaggagtggtattg
atggatcttccagtagaacattgtccaattttctgaggaactgccaaact
gatttccagagtagttgtaccaccttgcaatcccaccatctatggaggaa
tgttcctctttctccacatccttactagcatctgctgtcacctgagcttt
tgatcttagccatactgattggtatgaggtggaatttcagggttgttttg
atttgcattttcttgatgattaaggatgttgaacattttttaaggtgctt
cccagccattcggtattcctcagttgagaattcttggtttagctctgaac
cccatttttaaataggattatttggttttctggagtgcaacttcttgagt
tctttatatatattggatattggacccctgtcagatttaggattggtaaa
gatctttctcaatcttttggttgcagttttgtcttattgacagtgtcctt
tgccttacagaagctttacaattttatgaggatttcatttgtctattctt
gatcttacagcacaagccattgctattctgttcaggaatttttcacctgt
gcccatatcttcaaggctcttccccagtttctcctctataagcttcagtc
tctggttttatgtggagttccttgatccacttagacttgagctttgtaca
aggagataagaatggatcaattcgcattcttctacacgctaaccacaagt
tgagccagcaccatttgttgaaatgctggtcttctttccactggatgggt
tttagctcctttggtcaagatcaagtgaccatagggtggtgtgggttcat
ttctgggtctttaactctgtccaattatctcctggtcagtcactgactgg
tacccatacaggtttatcccaggtgcctctgttagtca
gaattcaggagctttctggaggatcagtgcatgtctgtgtcttcttagag
caatggggaaagcaggataaaaggaggagggtaagttaggtccagagttc
caagaaagcaggaaacatatttctgggtctatcagtaattgactaaggcc
tcctcaaaggaatttaaatttctagaaactttccaactctccaaccctga
gaaagtgtgcctgggatcgttctccagaacagtggtaatctctgcttgtt
ggcagcaaagggtctgctgctgtaccgaagtgacatagaaagctatcaca
gcatctgatctgagtactagcaacaccccacggttttattgccatcctga
gataagttcataaaatctttcagtaatctttcaattgtgtccagagagac
aggcatcttccctggactcaacatttgctgtgtgatgtcaccatatgagg
ttctatgagatacacagaggatgcaaagggtcctcccaacccagagcaga
gagaaaattctcattgtttgggagcaacagaacaaaagcaaggtgcaaag
tagttcctaactctgttatcaccagtgaggaaaattgaaagcagcagagg
atgcacagaaagcaggatttgctcaaagggtaaatgaagtctccaaaccg
caccagccaatgctatgtaggagatggcttattgaagcagtaagcagaga
gtagtgaagcaatgctctcctactctcatggacaatccagtcccaatgtc
acttctgccatcaaaagccctacatgaaatgaagacgggaagatttttct
tggaaaataattataaagaatgaacatttagagttacccacacttgaaag
aaattagagtttccaaattgcaggatccttagagagagtctagactaaat
cacttctttactaataaggaatgaaggatggggttagccaacgtatgctg
ctacaaactcagtagagaccatatctctctcaaagtatggtctctgtgta
tcctgtgtgaatctagaggacgagatgcttttttttcctttttaaattaa
tattttgagaatactatacattgacactgcaatctacatcactttcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24540881_24541991
seq2: B6Ng01-292F18.g_69_1167 (reverse)

seq1  GATGAAAGTGATGTAGA-TGCAGTGTCAATGTATAGTATTCTCAAAAATA  49
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  GATGAAAGTGATGTAGATTGCAGTGTCAATGTATAGTATTCTC-AAAATA  49

seq1  TTATTTTAAAAAGGGAAAAAAAAAGCAATTCTCGTCTTTCTAGATTTCAC  99
      ||| ||||||||||  |||||||||||  |||||||  |||||| |||||
seq2  TTAATTTAAAAAGG--AAAAAAAAGCA--TCTCGTC-CTCTAGA-TTCAC  93

seq1  ACAGGATAACACAGAGACCATTACTTTGAGAGAGATATGGTCTCTAACTT  149
      ||||||| |||||||||||| |||||||||||||||||||||||||   |
seq2  ACAGGAT-ACACAGAGACCA-TACTTTGAGAGAGATATGGTCTCTA--CT  139

seq1  GAGTTTTGTAGCAGCATACGTTGGCTAACCCCATCCTTCATTTCCTTATT  199
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAG-TTTGTAGCAGCATACGTTGGCTAACCCCATCCTTCA-TTCCTTATT  187

seq1  AGTAAAGAAGTGATTTAGTCTAGACTCTCTCTAAGGATCCTGCAATTTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGAAGTGATTTAGTCTAGACTCTCTCTAAGGATCCTGCAATTTGG  237

seq1  AAACTCTAATTTCTTTCAAGTGTGGGTAACTCTAAATGTTCATTCTTTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTAATTTCTTTCAAGTGTGGGTAACTCTAAATGTTCATTCTTTAT  287

seq1  AATTATTTTCCAAGAAAAATCTTCCCGTCTTCATTTCATGTAGGGCTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTCCAAGAAAAATCTTCCCGTCTTCATTTCATGTAGGGCTTTT  337

seq1  GATGGCAGAAGTGACATTGGGACTGGATTGTCCATGAGAGTAGGAGAGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGAAGTGACATTGGGACTGGATTGTCCATGAGAGTAGGAGAGCA  387

seq1  TTGCTTCACTACTCTCTGCTTACTGCTTCAATAAGCCATCTCCTACATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCACTACTCTCTGCTTACTGCTTCAATAAGCCATCTCCTACATAG  437

seq1  CATTGGCTGGTGCGGTTTGGAGACTTCATTTACCCTTTGAGCAAATCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTGGTGCGGTTTGGAGACTTCATTTACCCTTTGAGCAAATCCTG  487

seq1  CTTTCTGTGCATCCTCTGCTGCTTTCAATTTTCCTCACTGGTGATAACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGCATCCTCTGCTGCTTTCAATTTTCCTCACTGGTGATAACAG  537

seq1  AGTTAGGAACTACTTTGCACCTTGCTTTTGTTCTGTTGCTCCCAAACAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGAACTACTTTGCACCTTGCTTTTGTTCTGTTGCTCCCAAACAAT  587

seq1  GAGAATTTTCTCTCTGCTCTGGGTTGGGAGGACCCTTTGCATCCTCTGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTCTCTCTGCTCTGGGTTGGGAGGACCCTTTGCATCCTCTGTG  637

seq1  TATCTCATAGAACCTCATATGGTGACATCACACAGCAAATGTTGAGTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATAGAACCTCATATGGTGACATCACACAGCAAATGTTGAGTCCA  687

seq1  GGGAAGATGCCTGTCTCTCTGGACACAATTGAAAGATTACTGAAAGATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATGCCTGTCTCTCTGGACACAATTGAAAGATTACTGAAAGATTT  737

seq1  TATGAACTTATCTCAGGATGGCAATAAAACCGTGGGGTGTTGCTAGTACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTTATCTCAGGATGGCAATAAAACCGTGGGGTGTTGCTAGTACT  787

seq1  CAGATCAGATGCTGTGATAGCTTTCTATGTCACTTCGGTACAGCAGCAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAGATGCTGTGATAGCTTTCTATGTCACTTCGGTACAGCAGCAGA  837

seq1  CCCTTTGCTGCCAACAAGCAGAGATTACCACTGTTCTGGAGAACGATCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCTGCCAACAAGCAGAGATTACCACTGTTCTGGAGAACGATCCC  887

seq1  AGGCACACTTTCTCAGGGTTGGAGAGTTGGAAAGTTTCTAGAAATTTAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACTTTCTCAGGGTTGGAGAGTTGGAAAGTTTCTAGAAATTTAAA  937

seq1  TTCCTTTGAGGAGGCCTTAGTCAATTACTGATAGACCCAGAAATATGTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGAGGAGGCCTTAGTCAATTACTGATAGACCCAGAAATATGTTT  987

seq1  CCTGCTTTCTTGGAACTCTGGACCTAACTTACCCTCCTCCTTTTATCCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTTCTTGGAACTCTGGACCTAACTTACCCTCCTCCTTTTATCCTG  1037

seq1  CTTTCCCCATTGCTCTAAGAAGACACAGACATGCACTGATCCTCCAGAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCCATTGCTCTAAGAAGACACAGACATGCACTGATCCTCCAGAAA  1087

seq1  GCTCCTGAATTC  1111
      ||||||||||||
seq2  GCTCCTGAATTC  1099