BAC Information

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BAC

Clone NameB6Ng01-294P10
Chromosome11 (Build37)
Map Location 30,645,980 - 30,851,458
singlet/doubletdoublet
Overlap geneLOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik
Upstream geneC230094A16Rik, 4931440F15Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470
Downstream geneAsb3, Chac2, Stc2, 2310022M17Rik, Cpeb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294P10.bB6Ng01-294P10.g
ACCGA090955GA090956
length1,091512
definitionB6Ng01-294P10.b B6Ng01-294P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,850,369 - 30,851,458)(30,645,980 - 30,646,487)
sequence
gaattcatacccaaccagcagggttggatgaagttctaggaaagctgtgt
attaagcttatttttttctaggaagaagaaaaggattacaaaggccccaa
tccaagagagcttttggaaccactatttaaacaaagcagttgttcctaca
gagtaagtattttatgtgcatttgaaagtaagtctttagcagccagtaga
cgcttaaaatggcttttcttcgtttattagggtatgacaccctttaagtt
gggcacaagtcttactgcttaatagtatgttgttcatttaaattcttata
tagtacaccaatatcaaagtatcagctactgaactactttgaatgttttg
gggttcaaaggaaagcctttttgaattcttgaatagaattataaaatgct
aaccactatttataagctatgtagaaaattagcccgatagttattacaga
cctaaataagccctagctctattttacagagccagttagtagaaaccaca
tatacctcacaagttttgtattttgtgtggcataattttgtgtcacttca
taaaaatttattccagctgcttaaaattttaggtaaaattcggttgactt
atatggcttttgtgtgttaaaaacatacctgtctttttagattgaatctt
actggacttatgaggtctgtcatgggaaacatattcgacagtaccatgaa
gaaaaagaaactggccaagtatgtttttctttaaacataaaccataaaat
gagaaatttcacaatgatattgataatttttcaagttgtaacaaattaaa
tatgtttgtaatatactgtactttttttaatgtagaaagtaaatattcat
gaatactaccttgggaatatgttggctaagaatcttctgtatgaaaaagg
ttagtctctacaatggtgatatactactgggtttgggtttaacatttgag
tccaggcatggtgggacatgactgtaatgctagcgtttggaagagtagaa
gcagtagaaaaggaattcaagcatggctttacctagcaggcctaatatgc
ttctgcaacatgagattgactccaagaaggagaaaggaaaa
gaattccagtcaaaggctggcagggggcagggtacttctggtttggcatc
taggttttgctggcacctgaggctagtgaaagccaagtagttttgcagtc
ttgtaatgctggtccaaagtgggggctgaagctggaaggaattctatcag
aaccatctagtttatatcagctcacttgcttgcttgcttgcttttttctt
tctttctttttcttcctttctttctttctttctttctttctttctttctt
tctttctttctttctttctttctctttctctctctttctttctctctttt
tccttcctttctctttctttctttctttctttctttctttctctttctct
ctctttctttctctctttctttttccttccttccttccttcctttcttcc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctttctttctttctctctctctctctctctctctctctctctctc
tctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30850369_30851458
seq2: B6Ng01-294P10.b_51_1141 (reverse)

seq1  -TTTTCTTTCT--TTCTCTGAGTCAATCTCATGTTGCAGAAGCATA-TAG  46
       ||| ||||||  ||||  ||||||||||||||||||||||||||| |||
seq2  TTTTCCTTTCTCCTTCTTGGAGTCAATCTCATGTTGCAGAAGCATATTAG  50

seq1  GCCTTGCTAGGTAAAGCCAATGGCCTTGAATTCCTTTTCCTACTGCTTCT  96
      ||| |||||||||||||| |||  |||||||||||||| |||||||||||
seq2  GCC-TGCTAGGTAAAGCC-ATG--CTTGAATTCCTTTT-CTACTGCTTCT  95

seq1  ACTC-TCCAAACGCTAGCATTACAGTCATGTCCCACCATGCCTGGACTCA  145
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCAAACGCTAGCATTACAGTCATGTCCCACCATGCCTGGACTCA  145

seq1  AATGTTAAA-CCAAACCCAGTAGTATATCACCATTGTAGAGACTAACCTT  194
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAAACCCAAACCCAGTAGTATATCACCATTGTAGAGACTAACCTT  195

seq1  TTTCATACAGAAGATTCTTAGCCAACATATTCCCAAGGTAGTATTCATGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACAGAAGATTCTTAGCCAACATATTCCCAAGGTAGTATTCATGA  245

seq1  ATATTTACTTTCTACATTAAAAAAAGTACAGTATATTACAAACATATTTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTTTCTACATTAAAAAAAGTACAGTATATTACAAACATATTTA  295

seq1  ATTTGTTACAACTTGAAAAATTATCAATATCATTGTGAAATTTCTCATTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTACAACTTGAAAAATTATCAATATCATTGTGAAATTTCTCATTT  345

seq1  TATGGTTTATGTTTAAAGAAAAACATACTTGGCCAGTTTCTTTTTCTTCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTATGTTTAAAGAAAAACATACTTGGCCAGTTTCTTTTTCTTCA  395

seq1  TGGTACTGTCGAATATGTTTCCCATGACAGACCTCATAAGTCCAGTAAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTGTCGAATATGTTTCCCATGACAGACCTCATAAGTCCAGTAAGA  445

seq1  TTCAATCTAAAAAGACAGGTATGTTTTTAACACACAAAAGCCATATAAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCTAAAAAGACAGGTATGTTTTTAACACACAAAAGCCATATAAGT  495

seq1  CAACCGAATTTTACCTAAAATTTTAAGCAGCTGGAATAAATTTTTATGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCGAATTTTACCTAAAATTTTAAGCAGCTGGAATAAATTTTTATGAA  545

seq1  GTGACACAAAATTATGCCACACAAAATACAAAACTTGTGAGGTATATGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACAAAATTATGCCACACAAAATACAAAACTTGTGAGGTATATGTG  595

seq1  GTTTCTACTAACTGGCTCTGTAAAATAGAGCTAGGGCTTATTTAGGTCTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACTAACTGGCTCTGTAAAATAGAGCTAGGGCTTATTTAGGTCTG  645

seq1  TAATAACTATCGGGCTAATTTTCTACATAGCTTATAAATAGTGGTTAGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTATCGGGCTAATTTTCTACATAGCTTATAAATAGTGGTTAGCA  695

seq1  TTTTATAATTCTATTCAAGAATTCAAAAAGGCTTTCCTTTGAACCCCAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATTCTATTCAAGAATTCAAAAAGGCTTTCCTTTGAACCCCAAA  745

seq1  ACATTCAAAGTAGTTCAGTAGCTGATACTTTGATATTGGTGTACTATATA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAAAGTAGTTCAGTAGCTGATACTTTGATATTGGTGTACTATATA  795

seq1  AGAATTTAAATGAACAACATACTATTAAGCAGTAAGACTTGTGCCCAACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAAATGAACAACATACTATTAAGCAGTAAGACTTGTGCCCAACT  845

seq1  TAAAGGGTGTCATACCCTAATAAACGAAGAAAAGCCATTTTAAGCGTCTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGTGTCATACCCTAATAAACGAAGAAAAGCCATTTTAAGCGTCTA  895

seq1  CTGGCTGCTAAAGACTTACTTTCAAATGCACATAAAATACTTACTCTGTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCTAAAGACTTACTTTCAAATGCACATAAAATACTTACTCTGTA  945

seq1  GGAACAACTGCTTTGTTTAAATAGTGGTTCCAAAAGCTCTCTTGGATTGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAACTGCTTTGTTTAAATAGTGGTTCCAAAAGCTCTCTTGGATTGG  995

seq1  GGCCTTTGTAATCCTTTTCTTCTTCCTAGAAAAAAATAAGCTTAATACAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGTAATCCTTTTCTTCTTCCTAGAAAAAAATAAGCTTAATACAC  1045

seq1  AGCTTTCCTAGAACTTCATCCAACCCTGCTGGTTGGGTATGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCTAGAACTTCATCCAACCCTGCTGGTTGGGTATGAATTC  1091

seq1: chr11_30645980_30646487
seq2: B6Ng01-294P10.g_67_578

seq1  GAATTCCAGTCAAAGGCTGGCAGGGGGCAGGGTACTTCTGGTTTGGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCAAAGGCTGGCAGGGGGCAGGGTACTTCTGGTTTGGCATC  50

seq1  TAGGTTTTGCTGGCACCTGAGGCTAGTGAAAGCCAAGTAGTTTTGCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTGCTGGCACCTGAGGCTAGTGAAAGCCAAGTAGTTTTGCAGTC  100

seq1  TTGTAATGCTGGTCCAAAGTGGGGGCTGAAGCTGGAAGGAATTCTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGCTGGTCCAAAGTGGGGGCTGAAGCTGGAAGGAATTCTATCAG  150

seq1  AACCATCTAGTTTATATCAGCTCACTTGCTTGCTTGCTTGCTTTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTAGTTTATATCAGCTCACTTGCTTGCTTGCTTGCTTTTTTCTT  200

seq1  TCTTTCTTTTTCTTC----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  246
      |||||||||||||||    |||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  250

seq1  TCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTTTCTTTCTCTCTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTCTCTTTCTTTCTCTCTTTT  300

seq1  TCCTTCCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCT  350

seq1  CTCTTTCTTTCTCTCTTTCTTTTTCCTTCCTTCCTTCCTTCCTTTCTTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTTCTCTCTTTCTTTTTCCTTCCTTCCTTCCTTCCTTTCTTCC  400

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  450

seq1  TCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  500

seq1  TCTCTCTCTCTC  508
      ||||||||||||
seq2  TCTCTCTCTCTC  512