BAC Information

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BAC

Clone NameB6Ng01-296K18
Chromosome11 (Build37)
Map Location 12,921,073 - 12,922,234
singlet/doubletsinglet
Overlap genenone
Upstream geneGrb10, Cobl, LOC627244
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296K18.bB6Ng01-296K18.g
ACCGA092221GA092222
length1,1491,179
definitionB6Ng01-296K18.b B6Ng01-296K18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaagtaaatgcacataaacaaataaactgaagaaatgttttaa
taaaatggaacaagaagagtcagaagaaaaaaaaaccctaatatttcttg
gaaacaaagccccatcactggattggactgatgtatcaataaaaatcatc
ttagaagcagggagaaactgtaggttgtgtttatttacacatgagagctc
aggacttcctagactcaaacatggtgctagaacagattgtctgtagtcag
aatgttccctctgtaaataaaatcatcctactttgtatgtaggctgttta
tcaacaggatgcattcagaatatgtaattcaataattttatcattctaca
aatactgtgcactaccctttctgggtagtatatgttgctgctttgcttac
attgcatcataacaagcatgaaagtaatacatagctctgtgacaatgact
atgatattaagaaaaggaagggatttttcaaccacattcatggcatatgt
tgtctatcagtgaccaaaatacttctgaagtgcatgatgtaatcacaact
gaaagcactgaaatatatatttcaggtatcctgtgaataaaatgtatctt
gtcacagccaaataataccaccctggttatttcttcttctgttaacaaaa
tcacttaaaatttccagttttgaaggcaaagtggaggaatcattcactga
aactacaaaatattcagaacagaattctgtgtggtatggaaatctaaaag
cagtagcactgaggaaacgttatgtagctgcagcaagaaggaggttattt
gatagaaacactcaacaagacattaggaagcttatgtgcaaagatagctt
ggtatagctaccctgaaagcaacacacaaaagccagtctaaatgcagaaa
aaggaacaaaaatcaagtctctagaaaggtctgtagcaaatacaaaaaaa
aaaaatgcataaatggtgattatctgctaggacacatatttctagcaaat
tccattaaacagagattgctaaacagatggcataaatttattcattatct
ttttagctaacatatatgaaaatactagatttgtcataaaagaatatgag
aatatgcttttctttcatggttttctttttcctataccataatacactg

gaattctttgtatattctggttactaatccaaatgttggatatgaatctg
gtatacattgtcccatctcttcacttaattgacagttttctttctataca
aaagctttttaatttttaaaaactcaatttgttattataggctttatttt
ctgaatattggatgcctattcagaaagtccttatactatgcctatatatt
aaattatactccttacttaactcctctgacactttcagacatgcatgact
tttatcctttatatgattggaattgaattttgtgtgacaagaaacaaggt
tttagtttctatctgcagatacccagtttttctaggaccattttttttgt
tgttgttgatggtattatttctctaatttttgcttttgacatcttgtcaa
aagttgggttattttagttacatggtgtcttagccagagtttctattcct
gcacaaacatcatgaccaaggaaaagttggggaggaaagggtttattcag
attacacttccatactgccgttcatcacgaaggaagtcaggactggaact
caagcaggtcaggaagcaggagctgatgcagaggccatggagggatgttc
tttactggcttgcttccactagctttctcagcctgatctcttatagaacc
atgactaccagcgcagagatggtcctacccacaaggggccttttcccctt
tatcactaattgagaaaatgccccacagctggatctcatggaggcacttc
cccaactgaagctcctttctctatgataattccagcgtgtgtcacgttga
cacacaaaaccacccagtacacatggctttgcatctgggacttcaattct
cttgatctatgcatctgtttttatgccagttccatccatgctagtttcat
ttgggatgaggctgtaataacataaagttaggtatgttgacacattggta
cactttttgatcagatttctctgactagccggggtcttctacttctttgg
tgagtttaagtttaaaaaaaattctgtgacatgacactgaaatttaatag
attcataaatctttacattgcttgtagatagcttcagacattgaattcat
gaatgattgtgtggtggatcctccttggatctcccaatttcttaaaggct
tgaagttttactaataatttttcacctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12921073_12922234
seq2: B6Ng01-296K18.b_46_1194 (reverse)

seq1  CAGTGTATAATGGTATAAAGAAAAAAAGGAAAAACATGAAAAGAAAAAGC  50
      |||||||| |||||||  || |||||  ||||| |||||||   ||||||
seq2  CAGTGTATTATGGTAT--AGGAAAAA--GAAAACCATGAAA--GAAAAGC  44

seq1  ATATTTTCTTCATATTCTTTTATGACAAATCTAAGTATTTTCAATATATG  100
      |||||    ||||||||||||||||||||||| ||||||||| |||||||
seq2  ATATT---CTCATATTCTTTTATGACAAATCT-AGTATTTTC-ATATATG  89

seq1  TTAGCTAAAAAGATAATTGAATTAAATTTATGCCATCTGTTTAGCAATCT  150
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  TTAGCTAAAAAGATAA-TGAA-TAAATTTATGCCATCTGTTTAGCAATCT  137

seq1  CTGTTTAATGGAATTTGCTAGAAATATGTGTTCCTAGCAGATAATCA-CA  199
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  CTGTTTAATGGAATTTGCTAGAAATATGTG-TCCTAGCAGATAATCACCA  186

seq1  TTTATGCATTTTTTTTTTTTTGTATTTGCTACAGACC-TTCTAGAGACTT  248
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  TTTATGCA-TTTTTTTTTTTTGTATTTGCTACAGACCTTTCTAGAGACTT  235

seq1  GATTTTTGTTCCTTTTTCTGCATTTAGACTGGCTTTTGTGTGTTGCTTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGTTCCTTTTTCTGCATTTAGACTGGCTTTTGTGTGTTGCTTTC  285

seq1  AGGGTAGCTATACCAAGCTATCTTTGCACATAAGCTTCCTAATGTCTTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGCTATACCAAGCTATCTTTGCACATAAGCTTCCTAATGTCTTGT  335

seq1  TGAGTGTTTCTATCAAATAACCTCCTTCTTGCTGCAGCTACATAACGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTTCTATCAAATAACCTCCTTCTTGCTGCAGCTACATAACGTTT  385

seq1  CCTCAGTGCTACTGCTTTTAGATTTCCATACCACACAGAATTCTGTTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTGCTACTGCTTTTAGATTTCCATACCACACAGAATTCTGTTCTG  435

seq1  AATATTTTGTAGTTTCAGTGAATGATTCCTCCACTTTGCCTTCAAAACTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTGTAGTTTCAGTGAATGATTCCTCCACTTTGCCTTCAAAACTG  485

seq1  GAAATTTTAAGTGATTTTGTTAACAGAAGAAGAAATAACCAGGGTGGTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTAAGTGATTTTGTTAACAGAAGAAGAAATAACCAGGGTGGTAT  535

seq1  TATTTGGCTGTGACAAGATACATTTTATTCACAGGATACCTGAAATATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCTGTGACAAGATACATTTTATTCACAGGATACCTGAAATATAT  585

seq1  ATTTCAGTGCTTTCAGTTGTGATTACATCATGCACTTCAGAAGTATTTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTGCTTTCAGTTGTGATTACATCATGCACTTCAGAAGTATTTTG  635

seq1  GTCACTGATAGACAACATATGCCATGAATGTGGTTGAAAAATCCCTTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGATAGACAACATATGCCATGAATGTGGTTGAAAAATCCCTTCCT  685

seq1  TTTCTTAATATCATAGTCATTGTCACAGAGCTATGTATTACTTTCATGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAATATCATAGTCATTGTCACAGAGCTATGTATTACTTTCATGCT  735

seq1  TGTTATGATGCAATGTAAGCAAAGCAGCAACATATACTACCCAGAAAGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGATGCAATGTAAGCAAAGCAGCAACATATACTACCCAGAAAGGG  785

seq1  TAGTGCACAGTATTTGTAGAATGATAAAATTATTGAATTACATATTCTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACAGTATTTGTAGAATGATAAAATTATTGAATTACATATTCTGA  835

seq1  ATGCATCCTGTTGATAAACAGCCTACATACAAAGTAGGATGATTTTATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCTGTTGATAAACAGCCTACATACAAAGTAGGATGATTTTATTT  885

seq1  ACAGAGGGAACATTCTGACTACAGACAATCTGTTCTAGCACCATGTTTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGAACATTCTGACTACAGACAATCTGTTCTAGCACCATGTTTGA  935

seq1  GTCTAGGAAGTCCTGAGCTCTCATGTGTAAATAAACACAACCTACAGTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGAAGTCCTGAGCTCTCATGTGTAAATAAACACAACCTACAGTTT  985

seq1  CTCCCTGCTTCTAAGATGATTTTTATTGATACATCAGTCCAATCCAGTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCTTCTAAGATGATTTTTATTGATACATCAGTCCAATCCAGTGA  1035

seq1  TGGGGCTTTGTTTCCAAGAAATATTAGGGTTTTTTTTTCTTCTGACTCTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTTTGTTTCCAAGAAATATTAGGGTTTTTTTTTCTTCTGACTCTT  1085

seq1  CTTGTTCCATTTTATTAAAACATTTCTTCAGTTTATTTGTTTATGTGCAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCATTTTATTAAAACATTTCTTCAGTTTATTTGTTTATGTGCAT  1135

seq1  TTACTTGTGAATTC  1162
      ||||||||||||||
seq2  TTACTTGTGAATTC  1149


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