BAC Information

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BAC

Clone NameB6Ng01-299E01
Chromosome11 (Build37)
Map Location 40,669,861 - 40,670,396
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1
Downstream geneLOC100039256, LOC100039285, Hspd1, LOC100039292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299E01.bB6Ng01-299E01.g
ACCGA094144GA094145
length532503
definitionB6Ng01-299E01.b B6Ng01-299E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atctcatggtggggcaccaaggcctggcactattactgattctatgatgt
gcttacagataggaatctggcacgactgtcctctgagatgcccaaccagc
agctgactgagacagacagatacttatacccaaccattgaactgaagtca
atgacccctatggttgaataggaaaggactgaagaagttgaaggggagag
tgactccataggaagacgagcagtctcaactaacccaaatgccaggaagt
ttccagagactgagtcaccaagcaggagcatacaggtctgcgccaagaac
cctggcaattatatagcagtggtcttcctggtcaggcctcagtgggagaa
gatgcgcttaatccttgagagacttgaggtcccagggaaggagagtttgg
ggatggagagcaccctctcagaggcaaaggggaggaggaatgggttgagg
aactatggagggcaggtcaatgacaggaatgtaaataaaaaaatacacgt
gaaatagggagggaattgtggtagggaggatg

gaattctcacctgagcaatactgaatggcagagacgcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggggacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactgccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttattttttttttctgtttcttttttttttcca
ttttttattaggtatttagctcatttacatttcctatgctataccaaaag
tcctccatacccactcacccctactcccctacccacccactccccctttt
tgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40669861_40670396
seq2: B6Ng01-299E01.b_45_580

seq1  ATTCATCTCATGGTGGGGCACCAAGGCCTGGCACTATTACTGATTCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTCATGGTGGGGCACCAAGGCCTGGCACTATTACTGATTCTATG  50

seq1  ATGTGCTTACAGATAGGAATCTGGCACGACTGTCCTCTGAGATGCCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTTACAGATAGGAATCTGGCACGACTGTCCTCTGAGATGCCCAAC  100

seq1  CAGCAGCTGACTGAGACAGACAGATACTTATACCCAACCATTGAACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTGACTGAGACAGACAGATACTTATACCCAACCATTGAACTGAA  150

seq1  GTCAATGACCCCTATGGTTGAATAGGAAAGGACTGAAGAAGTTGAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGACCCCTATGGTTGAATAGGAAAGGACTGAAGAAGTTGAAGGGG  200

seq1  AGAGTGACTCCATAGGAAGACGAGCAGTCTCAACTAACCCAAATGCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACTCCATAGGAAGACGAGCAGTCTCAACTAACCCAAATGCCAGG  250

seq1  AAGTTTCCAGAGACTGAGTCACCAAGCAGGAGCATACAGGTCTGCGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCAGAGACTGAGTCACCAAGCAGGAGCATACAGGTCTGCGCCAA  300

seq1  GAACCCTGGCAATTATATAGCAGTGGTCTTCCTGGTCAGGCCTCAGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTGGCAATTATATAGCAGTGGTCTTCCTGGTCAGGCCTCAGTGGG  350

seq1  AGAAGATGCGCTTAATCCTTGAGAGACTTGAGGTCCCAGGGAAGGAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGCGCTTAATCCTTGAGAGACTTGAGGTCCCAGGGAAGGAGAGT  400

seq1  TTGGGGATGGAGAGCACCCTCTCAGAGGCAAAGGGGAGGAGGAATGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATGGAGAGCACCCTCTCAGAGGCAAAGGGGAGGAGGAATGGGTT  450

seq1  GAGGAACTATGGAGGGCAGGTCAATGACAGGAATGTAAATAAAAAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTATGGAGGGCAGGTCAATGACAGGAATGTAAATAAAAAAATAC  500

seq1  ACGTGAAATAGGGAGGGAATTGTGGTAGGGAGGATG  536
      ||||||||||||||||||||||||||||||||||||
seq2  ACGTGAAATAGGGAGGGAATTGTGGTAGGGAGGATG  536


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