BAC Information

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BAC

Clone NameB6Ng01-299E23
Chromosome11 (Build37)
Map Location 50,359,573 - 50,360,573
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1381, Olfr1380, Flt4, LOC100040032, Scgb3a1, Cnot6, LOC666899, LOC100040073, Gfpt2, Mapk9, Rasgef1c, Rnf130, LOC380696, Tbc1d9b, 3010026O09Rik, Sqstm1, Mgat4b, Ltc4s, Maml1, Canx, 1700121K02Rik, Hnrph1, Rufy1
Downstream geneAdamts2, Zfp354c, 9630041N07Rik, Grm6, Zfp454, Zfp2, Zfp354b, Prop1, Olfr1379-ps1, Olfr1378, Olfr1377, Olfr226-ps1, Olfr51, Olfr54, Olfr1375-ps1, Zfp354a, LOC100040275, LOC382518, Olfr1374-ps1, 5133400J02Rik, LOC622699, BC049762, Clk4, Col23a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299E23.bB6Ng01-299E23.g
ACCGA094183GA094184
length1,001417
definitionB6Ng01-299E23.b B6Ng01-299E23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagactttccccagccaggcccaaggtccaccactggtgtggg
tattgggtaggaggtgcagccaagacttgtgggagctgtagactgtgcgg
gctcctgtccctggttctactcacagcgctgaccacatccactcccaggt
ctggctcgctgtgcttccttccccagcatccacacaaagctcacatccaa
gttcccagcattcccctggggtggaccgcgatatccatgcatccttccat
gctgctgcagactgaatgggaccttcgggggaccctaggcttcccaagat
aggtacctgggcgtggcttttcctgacaaacatttttcttttctttttac
agatggaagcactaattaagacatttgaatgtcttccatattcctaattc
tttgttcttttcctttatgtaacagagatgatcctgcctagcgcattacc
agctggccgagtaaacatcgagagactataaggatattttattttaattg
cctgagcctcaggattatggaatcaagatggaaggggaggattctgaaac
agggtggcagtcaggtgtgggggaggggcggtgtgggctccctaagacaa
gctggtggtcagacttcctattggtcaggagctcttgaccttgacccagg
agagactgagaagaatttggaggaggccaagctgctgtcctgttgacaag
agggcaggttccaaagccaagtcaattaaacacatttctccttaataaat
gtagcaactggcatgaaaatatgtcttattttcgaagatgcatgaatcag
tcagtttgccaggggcccaagaggcaagagcagtctgagctgtcagccgt
gcaatgtcccgatggtgggttccaggtttaactctctagggaacacagct
ttccagaacagggctccggagccagcatcccctgtagcttaagaagtgga
cgaaaccagggtgccgggcttggatgggttctcgactgggaaggagctac
c
attcattaattcatcattcactcgttcatcactcactcattcattcattt
gcttgtttacagacaggatatcgtgtagtccaagatggcctcaaactttg
taggaagctgaggatgactcagaacttctgagctctgtgacccattcacc
agagtgctggcactgtagctgtgaatggctggagagcagacgcaggacgt
aatgcttgttaggcaagcactctgccaactgagccctatcacagtggggt
gttagtgggttgtgttagtaagtaaggcgtggagggtcagctttcagggt
tgctgagtaccataggccctgaacagctccagggacaaaagcccacaggc
tggaccccctggtggttgtctctccttcagtgtgtgtgtgtgtgtgtgtg
tgtgtgtgagtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_50359573_50360573
seq2: B6Ng01-299E23.b_48_1047

seq1  GAATTCCAAGACTTTCCCCAGCCAGGCCCAAGGTCCACCACTGGTGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACTTTCCCCAGCCAGGCCCAAGGTCCACCACTGGTGTGGG  50

seq1  TATTGGGTAGGAGGTGCAGCCAAGACTTGTGGGAGCTGTAGACTGTGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGTAGGAGGTGCAGCCAAGACTTGTGGGAGCTGTAGACTGTGCGG  100

seq1  GCTCCTGTCCCTGGTTCTACTCACAGCGCTGACCACATCCACTCCCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGTCCCTGGTTCTACTCACAGCGCTGACCACATCCACTCCCAGGT  150

seq1  CTGGCTCGCTGTGCTTCCTTCCCCAGCATCCACACAAAGCTCACATCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCGCTGTGCTTCCTTCCCCAGCATCCACACAAAGCTCACATCCAA  200

seq1  GTTCCCAGCATTCCCCTGGGGTGGACCGCGATATCCATGCATCCTTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGCATTCCCCTGGGGTGGACCGCGATATCCATGCATCCTTCCAT  250

seq1  GCTGCTGCAGACTGAATGGGACCTTCGGGGGACCCTAGGCTTCCCAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCAGACTGAATGGGACCTTCGGGGGACCCTAGGCTTCCCAAGAT  300

seq1  AGGTACCTGGGCGTGGCTTTTCCTGACAAACATTTTTCTTTTCTTTTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTGGGCGTGGCTTTTCCTGACAAACATTTTTCTTTTCTTTTTAC  350

seq1  AGATGGAAGCACTAATTAAGACATTTGAATGTCTTCCATATTCCTAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAAGCACTAATTAAGACATTTGAATGTCTTCCATATTCCTAATTC  400

seq1  TTTGTTCTTTTCCTTTATGTAACAGAGATGATCCTGCCTAGCGCATTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTCCTTTATGTAACAGAGATGATCCTGCCTAGCGCATTACC  450

seq1  AGCTGGCCGAGTAAACATCGAGAGACTATAAGGATATTTTATTTTAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCCGAGTAAACATCGAGAGACTATAAGGATATTTTATTTTAATTG  500

seq1  CCTGAGCCTCAGGATTATGGAATCAAGATGGAAGGGGAGGATTCTGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCCTCAGGATTATGGAATCAAGATGGAAGGGGAGGATTCTGAAAC  550

seq1  AGGGTGGCAGTCAGGTGTGGGGGAGGGGCGGTGTGGGCTCCCTAAGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCAGTCAGGTGTGGGGGAGGGGCGGTGTGGGCTCCCTAAGACAA  600

seq1  GCTGGTGGTCAGACTTCCTATTGGTCAGGAGCTCTTGACCTTGACCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGGTCAGACTTCCTATTGGTCAGGAGCTCTTGACCTTGACCCAGG  650

seq1  AGAGACTGAGAAGAATTTGGAGGAGGCCAAGCTGCTGTCCTGTTGACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGAGAAGAATTTGGAGGAGGCCAAGCTGCTGTCCTGTTGACAAG  700

seq1  AGGGCAGGTTCC-AAGCC-AGTCAATTAAACACATTTCTCCTTAATAAAT  748
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  AGGGCAGGTTCCAAAGCCAAGTCAATTAAACACATTTCTCCTTAATAAAT  750

seq1  GTAGCAACTGGCATGAAAATATGTCTTATTTTCGAAGATGCATGAATCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAACTGGCATGAAAATATGTCTTATTTTCGAAGATGCATGAATCAG  800

seq1  TCAGTTTGGCAAGGGGCCCAAGAGGCAAGAGCAGTCTGAGCTGTCAGCCG  848
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTT-GCCAGGGGCCCAAGAGGCAAGAGCAGTCTGAGCTGTCAGCCG  849

seq1  TGCAATGTCCCGATGGTGGGTTCCAGGTTTAACTCTCTAGGGAACACAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGTCCCGATGGTGGGTTCCAGGTTTAACTCTCTAGGGAACACAGC  899

seq1  TTTCCAGAACAGGGCTCCGGAGCCAGCATCCCCTGGAGCTTAGGAAGTGG  948
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  TTTCCAGAACAGGGCTCCGGAGCCAGCATCCCCTGTAGCTTAAGAAGTGG  949

seq1  ACGGAGAGCCAGGGTGCAGGGCTTGGATGGAGTCACCGACTGGG-AGGAG  997
      |||   | ||||||||| |||||||||||| ||   |||||||| |||||
seq2  ACG--AAACCAGGGTGCCGGGCTTGGATGG-GTTCTCGACTGGGAAGGAG  996

seq1  CTAC  1001
      ||||
seq2  CTAC  1000