BAC Information

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BAC

Clone NameB6Ng01-301N03
Chromosome11 (Build37)
Map Location 74,917,653 - 74,918,436
singlet/doubletsinglet
Overlap geneSmg6
Upstream geneOlfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, LOC100043429, LOC627835
Downstream geneHic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae, Doc2b, Rph3al, 1700016K19Rik, 1500005K14Rik, Vps53
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301N03.bB6Ng01-301N03.g
ACCGA096035GA096036
length9171,172
definitionB6Ng01-301N03.b B6Ng01-301N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtatttttagtgtttagagcaaaatacactgcaaagaaatgca
taaatattaagtgtatctttgctgagttctaatagtgcatgtacctaagt
aacccagaaatctatcaaatatacatttgtacatttcagttgggattgca
ttccctagaaaaaatataaacttgagagttggggctgtagctcagtggta
gagcctagcatatgtgaggtcctaaattctatcccagtaatccccacttt
aaaaatgtacataaataaataaaaggaaaatctttggagtttgggagatg
gcttggatggtaaaatgctcgttgtgtaaacaaggggacctgagtttgag
tctcggcactcatgtaaaagctgggtatagcagtagactcctgtaattcc
actgtagatggaggagtggaagcagggagctccctggggttgctaatcta
gccaagtctcaaaagaaaaaggtgaggcctagaaagatggctcagtggtt
aatagtgcttgctgctcttcagaggggagcctgaattcacttgccagcac
ccatgtcaagtgactcgcaaatgcctgtaacgccaactccagggcaccca
gcaccctcctctgccctcagcactggtacctgtggcatatgttctcatga
gcacacatacataaatagaaattaactaattttaaaaggtggaaaggggg
ctggcgagatggctcagtggataagagcactgactgctcttccgaagctc
ctgagttcaaatcccagcaaccacatggtggctcacaaccacccataatg
agatctgacaccctcttctggtgcatctgaagacagctacagtgtactaa
tgtataataataaataaatcttaaaaaaaaaaaaaaaggtggaacgaaag
ccaggcatggtatgcac
gaattcctggctctcaatatccgggattacaggcttatgccatcacaccc
agctctgaccttacagatgaaaaactggaagttgaaagaggataaatgtc
gtgatggaggtccctggacagatttggaaagtggtgtgtcccaaaagata
tgtccacatccaaatccctgaatcctgtgactgtgaccgtatttagaaaa
agggcctgtgcagatgtaattaagtgagggatcttgagaagagatgatcc
tggattacccagacgggtcctaaatttaatggcaaatgcccctattaaag
acagaagaagaagcatgtgaggactgagacagaagtgacagccacagaaa
ctgtgaacagccaccagagctggaaaaggcaagaacagattgtccccggc
atctccagagggggcatagccctgaagacatcttgatttcacatgtctgg
cctccagagctgtgaaagaataaatctctgtggttttaaaccaccgagtt
tgtggtaatttacagcagccgtaggaaactgctagaatcccacagctgac
aaatggcagtgccaggctctggcaggctgaccccagactcaggctctgct
tgccatgtgactctgccagggcagaagcccaggctccatcctgctgcctc
tgtgacctcagcttcctcagtcaggcaaagtcagtggtgtgtctcggggg
ctgtgacaccagctgcaaggagttctgggcaatatggagtggaaaagaaa
ggcttagaaaactgcctgagattatgacctgctgggggcataggttcagt
gtaacttctctgccttatggtggcaggtccaaccacgctttatcatcatc
agcagcagcagcagcatcaccatcatcatcaccaccaccacccaaaatct
tttacttttcctgtatgtaccttgcccgtgggtcatactgtttgtatgta
agttgggttctctcccacaccctgtgagtttccaaggatcaactcaggtc
atcagctttagcagcaagacctttttactcgctgagccatctgcagcccc
gaatctgctttccatcagtactgaacttctgaccattcaccccatgcttg
gatgagcccctaagtgcctgcaccacattcacctcaccaccggttcacag
ttctcaaagagggcctggtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74917653_74918436
seq2: B6Ng01-301N03.b_47_830

seq1  GAATTCAGTATTTTTAGTGTTTAGAGCAAAATACACTGCAAAGAAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTTTTAGTGTTTAGAGCAAAATACACTGCAAAGAAATGCA  50

seq1  TAAATATTAAGTGTATCTTTGCTGAGTTCTAATAGTGCATGTACCTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTAAGTGTATCTTTGCTGAGTTCTAATAGTGCATGTACCTAAGT  100

seq1  AACCCAGAAATCTATCAAATATACATTTGTACATTTCAGTTGGGATTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGAAATCTATCAAATATACATTTGTACATTTCAGTTGGGATTGCA  150

seq1  TTCCCTAGAAAAAATATAAACTTGAGAGTTGGGGCTGTAGCTCAGTGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGAAAAAATATAAACTTGAGAGTTGGGGCTGTAGCTCAGTGGTA  200

seq1  GAGCCTAGCATATGTGAGGTCCTAAATTCTATCCCAGTAATCCCCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGCATATGTGAGGTCCTAAATTCTATCCCAGTAATCCCCACTTT  250

seq1  AAAAATGTACATAAATAAATAAAAGGAAAATCTTTGGAGTTTGGGAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTACATAAATAAATAAAAGGAAAATCTTTGGAGTTTGGGAGATG  300

seq1  GCTTGGATGGTAAAATGCTCGTTGTGTAAACAAGGGGACCTGAGTTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGATGGTAAAATGCTCGTTGTGTAAACAAGGGGACCTGAGTTTGAG  350

seq1  TCTCGGCACTCATGTAAAAGCTGGGTATAGCAGTAGACTCCTGTAATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGCACTCATGTAAAAGCTGGGTATAGCAGTAGACTCCTGTAATTCC  400

seq1  ACTGTAGATGGAGGAGTGGAAGCAGGGAGCTCCCTGGGGTTGCTAATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGATGGAGGAGTGGAAGCAGGGAGCTCCCTGGGGTTGCTAATCTA  450

seq1  GCCAAGTCTCAAAAGAAAAAGGTGAGGCCTAGAAAGATGGCTCAGTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTCTCAAAAGAAAAAGGTGAGGCCTAGAAAGATGGCTCAGTGGTT  500

seq1  AATAGTGCTTGCTGCTCTTCAGAGGGGAGCCTGAATTCACTTGCCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGCTTGCTGCTCTTCAGAGGGGAGCCTGAATTCACTTGCCAGCAC  550

seq1  CCATGTCAAGTGACTCGCAAATGCCTGTAACGCCAACTCCAGGGCACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCAAGTGACTCGCAAATGCCTGTAACGCCAACTCCAGGGCACCCA  600

seq1  GCACCCTCCTCTGCCCTCAGCACTGGTACCTGTGGCATATGTTCTCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTCCTCTGCCCTCAGCACTGGTACCTGTGGCATATGTTCTCATGA  650

seq1  GCACACATACATAAATAGAAATTAACTAATTTTAAAAGGTGGAAAGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATACATAAATAGAAATTAACTAATTTTAAAAGGTGGAAAGGGGG  700

seq1  CTGGCGAGATGGCTCAGTGGATAAGAGCACTGACTGCTCTTCCGAAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGAGATGGCTCAGTGGATAAGAGCACTGACTGCTCTTCCGAAGCTC  750

seq1  CTGAGTTCAAATCCCAGCAACCACATGGTGGCTC  784
      ||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCAAATCCCAGCAACCACATGGTGGCTC  784