BAC Information

Click to search

BAC

Clone NameB6Ng01-301O15
Chromosome11 (Build37)
Map Location 43,536,413 - 43,723,062
singlet/doubletdoublet
Overlap geneTtc1, Adra1b
Upstream geneAtp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik
Downstream geneIl12b, Ublcp1, 3732413I11Rik, Ebf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301O15.bB6Ng01-301O15.g
ACCGA096103GA096104
length287119
definitionB6Ng01-301O15.b B6Ng01-301O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,536,413 - 43,536,699)(43,722,944 - 43,723,062)
sequence
atagctgggtatgatggcacatagggcctgtaatctcagtgtttaaggtt
atatagttcaaggtcatcctacacatactaacttcaagcaccccctatcc
ccatccacaagaaggagtcctacttatacagactgtttcctaccatagtt
tataggattgacctgtgagccagaaatgctttgtcattaggaagaaaatt
agtttgtgaaagcctatggggtaattgagaggcttgtagtctcctctcct
ctcctctcctcccctttcccctctcccctctcccctc
catacgatgagaacattttcctatatcaagcgaaaatgaagccttttcat
ttatattttagctctgcttttggctgctgactcacccttccttccttcct
tccttcctccctccctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_43536413_43536699
seq2: B6Ng01-301O15.b_53_339

seq1  ATAGCTGGGTATGATGGCACATAGGGCCTGTAATCTCAGTGTTTAAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGGGTATGATGGCACATAGGGCCTGTAATCTCAGTGTTTAAGGTT  50

seq1  ATATAGTTCAAGGTCATCCTACACATACTAACTTCAAGCACCCCCTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTCAAGGTCATCCTACACATACTAACTTCAAGCACCCCCTATCC  100

seq1  CCATCCACAAGAAGGAGTCCTACTTATACAGACTGTTTCCTACCATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCACAAGAAGGAGTCCTACTTATACAGACTGTTTCCTACCATAGTT  150

seq1  TATAGGATTGACCTGTGAGCCAGAAATGCTTTGTCATTAGGAAGAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATTGACCTGTGAGCCAGAAATGCTTTGTCATTAGGAAGAAAATT  200

seq1  AGTTTGTGAAAGCCTATGGGGTAATTGAGAGGCTTGTAGTCTCCTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGAAAGCCTATGGGGTAATTGAGAGGCTTGTAGTCTCCTCTCCT  250

seq1  CTCCTCTCCTCCCCTTTCCCCTCTCCCCTCTCCCCTC  287
      |||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCCTCCCCTTTCCCCTCTCCCCTCTCCCCTC  287

seq1: chr11_43722944_43723062
seq2: B6Ng01-301O15.g_71_189 (reverse)

seq1  GGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGGTGAGTCAGCAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGGTGAGTCAGCAGCCAA  50

seq1  AAGCAGAGCTAAAATATAAATGAAAAGGCTTCATTTTCGCTTGATATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGCTAAAATATAAATGAAAAGGCTTCATTTTCGCTTGATATAGG  100

seq1  AAAATGTTCTCATCGTATG  119
      |||||||||||||||||||
seq2  AAAATGTTCTCATCGTATG  119