BAC Information

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BAC

Clone NameB6Ng01-305A14
Chromosome11 (Build37)
Map Location 105,006,833 - 105,008,009
singlet/doubletsinglet
Overlap genenone
Upstream geneCrhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2
Downstream geneLOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305A14.bB6Ng01-305A14.g
ACCGA098431GA098432
length1,0071,176
definitionB6Ng01-305A14.b B6Ng01-305A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacactagtcagaatggctaacatcaaaaattcaggtgacagc
agatgctcacaaggatgtggaaaaaaaaccctcctccattgttggtggga
ttgcaagcttgtacaaccactctggaaatcagtctggtggttcctcagaa
aattggacatagtacaaccagaggatcctgcaatacctctcctgggcata
tattcagaagatgttccaaccaataagaaggacacatgctacactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacaaaggaatgtatacagaaaatatggtacatttacacaatggag
tattattcagctattaaaaagaatgaatttatgaaatttctaagcaaatg
gttggacctggagggcatcatcctgagtgaggtaacccattcacaaaaga
actcacatgatatgtattcactgataagtggatattagcccagaaactta
gaatacccaagatataagatacaatttgtgaaacacatgaaactcaagaa
gaacgaaaaccaaagtgtggacactttgcctcttcttagaattgggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatctagagactgccatatccagggatccatcccataatcag
cctccaaacactgacaccattgcatacacttgcaagattttgctgaaagg
atcctgatatagctgtctcttgtgagactatgccagggcctagcaaacac
agaagtggatgctcacagtcaactattagatggatcacagggcccccaat
gggaggagctagagaaagtacccaaggagctaaagggatctgcaccctat
aggtgga
gaattcaatgaagtttctgctcttttgagtttttagacagaatttgaggt
tctagaaggccttgggagtgcagggagatgttcaggagctatttagataa
actaaaggctcaagacaagggattgattctcatctgggaatcacacgctt
cctggtgacactgccatctctagtgtcttgttctttgctcttgctgtcac
ctgggactgtgcactgtaccttgaacccatatgacctgttccctttggta
gctgatggcctccatcccttgcccaggtgtgcctggcttctgggacattc
tgggagccgctcttctcactgggttgtttcagaggatgtcacttcctggt
tttctctagggatccagctcctaggtgacattctacgcactcacctgggg
aattataaatatttaccgaatcctctctttggggcagatgctactctagg
cattgagattccgctgtgagtctagagaggaacatccatgaactctggca
aaggtcagagtgcagctgtcatggggaagacagagctgtagtcaccgtgc
ccggaggacctggtcactagtcagagatcaggagagaggggccaggtggg
aggggtctgggctccagtttatgtgtgcctgggagtggacacaaggtagg
agaggcaggacggaagggacctactgggtggagatgtacgaccgcatggc
tgtctgggtaatcatgaggcaatagattggtggcaagggcgaacacagta
ggaaagcctaagtgtcaagccagtgtggtggtacaggcttataaccccag
ccttctagagatagacacagggagatcaggagttcaagactaacctgggc
ttcataaaaccaaccaacaaagaaatccttaaaagaagacagatagctgc
tggggtggagatggctccatgggcagcagatcttgcttgttgcaagaaca
ggacccaagctcagattctagcacccatgcggcagagatcctggcccacg
actccagtgctgtggagcgagcagaggatcactggggcttctgcgcagtc
tagcttctaggttcaatgagagcacttgtcacaagaatagatacaggaac
atctgaacatcttctacacgctggcgcattgccatcgctaagagaaaccg
tacatctttaacacacacaatgtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105006833_105008009
seq2: B6Ng01-305A14.g_68_1243 (reverse)

seq1  AGTACA-TGTGTGTGT--AAGATGTACG--TTCTCTTGGGGGAATGGC-A  44
      |||||| |||||||||  ||||||||||  ||||||| | |  ||||| |
seq2  AGTACATTGTGTGTGTTAAAGATGTACGGTTTCTCTTAGCG--ATGGCAA  48

seq1  TGCGCAAGC-TGTAGAGGATG-TCAGATG-TCCTGTATCTATTCCTTTGT  91
      ||||| ||| |||||| |||| ||||||| ||||||||||||||  ||||
seq2  TGCGCCAGCGTGTAGAAGATGTTCAGATGTTCCTGTATCTATTC--TTGT  96

seq1  GAC-AGTGCCTCTCATTGAACCTAG-AGCTAGACTGGCGGCCAGAAGGCC  139
      ||| |||| |||||||||||||||| ||||||||| |||  ||||| |||
seq2  GACAAGTG-CTCTCATTGAACCTAGAAGCTAGACT-GCG--CAGAA-GCC  141

seq1  CCAGTGATCTTCCTGCCTCGCCTCCACAGCACTGGAGTCGTGGGCCAGGA  189
      ||||||||| | ||| |||| |||||||||||||||||||||||||||||
seq2  CCAGTGATCCT-CTG-CTCG-CTCCACAGCACTGGAGTCGTGGGCCAGGA  188

seq1  TCTCTGCCGCATGGGTGCTAGAATCTGAGCTTGGGTCCTTGTTCTTGCAA  239
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTCTGCCGCATGGGTGCTAGAATCTGAGCTTGGGTCC-TGTTCTTGCAA  237

seq1  C-AGCAAGATCTGCTGCCCATGGAGCCATCTCCACCCCAGCAGCTATCTG  288
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGATCTGCTGCCCATGGAGCCATCTCCACCCCAGCAGCTATCTG  287

seq1  TCTTCTTTTAAGGATTTCTTTGTTGGTTGGTTTTATGAAGCCCAGGTTAG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTAAGGATTTCTTTGTTGGTTGGTTTTATGAAGCCCAGGTTAG  337

seq1  TCTTGAACTCCTGATCTCCCTGTGTCTATCTCTAGAAGGCTGGGGTTATA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAACTCCTGATCTCCCTGTGTCTATCTCTAGAAGGCTGGGGTTATA  387

seq1  AGCCTGTACCACCACACTGGCTTGACACTTAGGCTTTCCTACTGTGTTCG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTACCACCACACTGGCTTGACACTTAGGCTTTCCTACTGTGTTCG  437

seq1  CCCTTGCCACCAATCTATTGCCTCATGATTACCCAGACAGCCATGCGGTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCCACCAATCTATTGCCTCATGATTACCCAGACAGCCATGCGGTC  487

seq1  GTACATCTCCACCCAGTAGGTCCCTTCCGTCCTGCCTCTCCTACCTTGTG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTCCACCCAGTAGGTCCCTTCCGTCCTGCCTCTCCTACCTTGTG  537

seq1  TCCACTCCCAGGCACACATAAACTGGAGCCCAGACCCCTCCCACCTGGCC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCCCAGGCACACATAAACTGGAGCCCAGACCCCTCCCACCTGGCC  587

seq1  CCTCTCTCCTGATCTCTGACTAGTGACCAGGTCCTCCGGGCACGGTGACT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCCTGATCTCTGACTAGTGACCAGGTCCTCCGGGCACGGTGACT  637

seq1  ACAGCTCTGTCTTCCCCATGACAGCTGCACTCTGACCTTTGCCAGAGTTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTGTCTTCCCCATGACAGCTGCACTCTGACCTTTGCCAGAGTTC  687

seq1  ATGGATGTTCCTCTCTAGACTCACAGCGGAATCTCAATGCCTAGAGTAGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTTCCTCTCTAGACTCACAGCGGAATCTCAATGCCTAGAGTAGC  737

seq1  ATCTGCCCCAAAGAGAGGATTCGGTAAATATTTATAATTCCCCAGGTGAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCCAAAGAGAGGATTCGGTAAATATTTATAATTCCCCAGGTGAG  787

seq1  TGCGTAGAATGTCACCTAGGAGCTGGATCCCTAGAGAAAACCAGGAAGTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAGAATGTCACCTAGGAGCTGGATCCCTAGAGAAAACCAGGAAGTG  837

seq1  ACATCCTCTGAAACAACCCAGTGAGAAGAGCGGCTCCCAGAATGTCCCAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCTGAAACAACCCAGTGAGAAGAGCGGCTCCCAGAATGTCCCAG  887

seq1  AAGCCAGGCACACCTGGGCAAGGGATGGAGGCCATCAGCTACCAAAGGGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGCACACCTGGGCAAGGGATGGAGGCCATCAGCTACCAAAGGGA  937

seq1  ACAGGTCATATGGGTTCAAGGTACAGTGCACAGTCCCAGGTGACAGCAAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCATATGGGTTCAAGGTACAGTGCACAGTCCCAGGTGACAGCAAG  987

seq1  AGCAAAGAACAAGACACTAGAGATGGCAGTGTCACCAGGAAGCGTGTGAT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAACAAGACACTAGAGATGGCAGTGTCACCAGGAAGCGTGTGAT  1037

seq1  TCCCAGATGAGAATCAATCCCTTGTCTTGAGCCTTTAGTTTATCTAAATA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATGAGAATCAATCCCTTGTCTTGAGCCTTTAGTTTATCTAAATA  1087

seq1  GCTCCTGAACATCTCCCTGCACTCCCAAGGCCTTCTAGAACCTCAAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGAACATCTCCCTGCACTCCCAAGGCCTTCTAGAACCTCAAATTC  1137

seq1  TGTCTAAAAACTCAAAAGAGCAGAAACTTCATTGAATTC  1177
      |||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAAACTCAAAAGAGCAGAAACTTCATTGAATTC  1176