BAC Information

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BAC

Clone NameB6Ng01-305N17
Chromosome11 (Build37)
Map Location 37,086,255 - 37,087,444
singlet/doubletsinglet
Overlap genenone
Upstream geneOdz2
Downstream geneLOC100039148, LOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305N17.bB6Ng01-305N17.g
ACCGA099040GA099041
length1,1721,199
definitionB6Ng01-305N17.b B6Ng01-305N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagagctggactcaagagttagtgttcaactcacaagaaagct
tttccagcttttcatatctgaattttcttacttatgactccaaaatgtca
taaattctataatttattgttagtgttggtcataattgcataatgtatat
actttatactcattatctacatttaaagtgtgttaaaagaaggttctatg
gttactgttagagatgatgactgtgaactggtgttacaggccactaggca
gtctttcaacttcttacactctatgaaagaattcccccagttagagacag
gagaattccaaactaacagtgggccactgtgatggctgaaaaaactattg
ttgtcctttcatcttgtaactatttcttttatttttcctttgcaattttg
ttccctatcttccacattgcactgtttgtcatgggtactggacctctggg
tccaatcagaaagtggaagtgggattatattagttacttttctattgcca
tgataaaacaccatgaccaaggcaagttataaaaagtaagggtttacttg
ggcttatggtatcagatggataaaagtccactatgtcagggaattgtggc
agcaagcagcagatgtgaaagcaggaatagctgggtactcacatctctaa
caccatgcaggaaacaaaaagagcaaactgggcatggtttgtgccctaga
aacctcaaaaccggacaccagtgacttatttcctccagcaagatcagacc
tcctaaacctacccaagaggtactaccaagtggggatcaagtattggaat
atttgagtctatgggggacaattctctttggaatccatcaaatcactata
tggagagaagtcttaagttgttaatttatccatagctccctcaatttacc
aagtcagtactgatttgacttcagcatgtaggctaagcttttcttagcag
gaagagaatatagtccatggagacttacccattggtttgatatgggaata
gttttaggagaggtttttcttattttctaataggagatataatatgtcaa
gacaattactctctgtctgaattctggagtttccatagatgcctgataag
atgaggcagtcttggagcaattagaacctggccatttcttagccaggtga
tattcagcaacacttccctctg
gaattcttatttccaaattagttaatctgtttggaaaagactagaaagtg
tgaccttgttggagaaggatactgctgtgggtaggcttgcagtttcaaaa
gctgacaccatccctgtgcatttccaccctgcctgctgtctactgatcag
gaggtaaagctgctcctctgacaccatagtctctgccatgatgatatgaa
agcaaacccctacctaaaggtttccttttgtaagaattaccttggtcatg
ttgcctgttcacagcaacatgaaaataactgagagatgcagctgtgagta
tttttttttatttcattcaattctagtggttagaagcatgggtctttgta
actaggtgatgctagctcaagacttagatatacttttatacttaatgtta
tacttcacttcgaaagccacccttttctgcttgctgaggtcaatatcctc
atcatgtggtgtctccctacagctggctctctgtagaatgggctatccat
ggagagagagagacagaacaagaaaacgtacccaagaaaagcctcagaat
atttacatactaatttcagaagtggcgctgttcaccttgcctgttttatt
tagaagcacatggctaacatccaaagaggtgaataaatccacacccaaaa
aaaggggaagtaaactcttccacttgaagatctgagctttatgaaagtta
tagacacatctgtgcaaccacctagtgtccctaacagccataattctcat
catatcacatcaaaatacatacccttcccgagtcagccaaagccatgtct
tagagtctcatctcaaggtccagaatttcatcatctcagtgaagttcaag
tacagggaagactcattatttagaccccattcgctatgtgtggcttgttg
agttcctctgaaaatgttttctgtccacaatatccagtacacataaacac
acatgcacacacacacacacacatgtgcacacacacacacacacacacac
acacacacacacacacacagccagattttatagcagctagaaaatctgac
tcacatgaaaattctgccctgatcgtgatgatagtactcgagtttcaatt
agtcataggccactgtagatccagctagcacaatgacctgattagtcctt
atctggaaaatctctctaatgtaatttacctctgtgtttctcggtacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37086255_37087444
seq2: B6Ng01-305N17.b_49_1220

seq1  GAATTCTTAGAGCTGGACTCAAGAGTTAGTGTTCAACTCACAAGAAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAGCTGGACTCAAGAGTTAGTGTTCAACTCACAAGAAAGCT  50

seq1  TTTCCAGCTTTTCATATCTGAATTTTCTTACTTATGACTCCAAAATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCTTTTCATATCTGAATTTTCTTACTTATGACTCCAAAATGTCA  100

seq1  TAAATTCTATAATTTATTGTTAGTGTTGGTCATAATTGCATAATGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTATAATTTATTGTTAGTGTTGGTCATAATTGCATAATGTATAT  150

seq1  ACTTTATACTCATTATCTACATTTAAAGTGTGTTAAAAGAAGGTTCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATACTCATTATCTACATTTAAAGTGTGTTAAAAGAAGGTTCTATG  200

seq1  GTTACTGTTAGAGATGATGACTGTGAACTGGTGTTACAGGCCACTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGTTAGAGATGATGACTGTGAACTGGTGTTACAGGCCACTAGGCA  250

seq1  GTCTTTCAACTTCTTACACTCTATGAAAGAATTCCCCCAGTTAGAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAACTTCTTACACTCTATGAAAGAATTCCCCCAGTTAGAGACAG  300

seq1  GAGAATTCCAAACTAACAGTGGGCCACTGTGATGGCTGAAAAAACTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCCAAACTAACAGTGGGCCACTGTGATGGCTGAAAAAACTATTG  350

seq1  TTGTCCTTTCATCTTGTAACTATTTCTTTTATTTTTCCTTTGCAATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTTCATCTTGTAACTATTTCTTTTATTTTTCCTTTGCAATTTTG  400

seq1  TTCCCTATCTTCCACATTGCACTGTTTGTCATGGGTACTGGACCTCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATCTTCCACATTGCACTGTTTGTCATGGGTACTGGACCTCTGGG  450

seq1  TCCAATCAGAAAGTGGAAGTGGGATTATATTAGTTACTTTTCTATTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCAGAAAGTGGAAGTGGGATTATATTAGTTACTTTTCTATTGCCA  500

seq1  TGATAAAACACCATGACCAAGGCAAGTTATAAAAAGTAAGGGTTTACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAACACCATGACCAAGGCAAGTTATAAAAAGTAAGGGTTTACTTG  550

seq1  GGCTTATGGTATCAGATGGATAAAAGTCCACTATGTCAGGGAATTGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATGGTATCAGATGGATAAAAGTCCACTATGTCAGGGAATTGTGGC  600

seq1  AGCAAGCAGCAGATGTGAAAGCAGGAATAGCTGGGTACTCACATCTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAGCAGATGTGAAAGCAGGAATAGCTGGGTACTCACATCTCTAA  650

seq1  CACCATGCAGGAAACAAAAAGAGCAAACTGGGCATGGTTTGTGCCCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCAGGAAACAAAAAGAGCAAACTGGGCATGGTTTGTGCCCTAGA  700

seq1  AACCTCAAAACCGGACACCAGTGACTTATTTCCTCCAGCAAGATCAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAAAACCGGACACCAGTGACTTATTTCCTCCAGCAAGATCAGACC  750

seq1  TCCTAAACCTACCCAAGAGGTACTACCAAGTGGGGATCAAGTATTGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACCTACCCAAGAGGTACTACCAAGTGGGGATCAAGTATTGGAAT  800

seq1  ATTTGAGTCTATGGGGGACAATTCTCTTTGGAATCCATCAAATCACTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTCTATGGGGGACAATTCTCTTTGGAATCCATCAAATCACTATA  850

seq1  TGGAGAGAAGTCTTAAGTTGTTAATTTATCCATAGCTCCCTCAATTTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAAGTCTTAAGTTGTTAATTTATCCATAGCTCCCTCAATTTACC  900

seq1  AAGTCAGTACTGATTTGACTTCAGCATGTAGGCTAAGCTTTTCTTAGCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTACTGATTTGACTTCAGCATGTAGGCTAAGCTTTTCTTAGCAG  950

seq1  GAAGAGAATATAGTCCATGGAGACTTACCCATTGGTTTGATAT-GGAATA  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAGAGAATATAGTCCATGGAGACTTACCCATTGGTTTGATATGGGAATA  1000

seq1  GTTTTAGGAGAGGTTTTTCTTATTTCTAAAAAGGAGAATATTATATTGTC  1049
      |||||||||||||||||||||||||   || ||||| |||| ||| ||||
seq2  GTTTTAGGAGAGGTTTTTCTTATTTTCTAATAGGAG-ATATAATA-TGTC  1048

seq1  AGGACCATTTTATTTCTTCTGTTCTTGATTTCTGGAGTTTCCATAGATGC  1099
      | ||| |  ||| |   |||||   ||| |||||||||||||||||||||
seq2  AAGACAA--TTACT--CTCTGT--CTGAATTCTGGAGTTTCCATAGATGC  1092

seq1  CTGATAAAGATGAAGGGCAAGTCTTGGAGCAAATTTTAGAACCTTGGCA-  1148
      ||||| |||||||  ||| |||||||||||||   ||||||||| | || 
seq2  CTGAT-AAGATGA--GGC-AGTCTTGGAGCAA---TTAGAACCTGGCCAT  1135

seq1  TTCTTAAGCAGGTGGATTATTCTAGCAACCACCTTCCCTCTG  1190
      ||||||  ||||||   ||||| ||||||   ||||||||||
seq2  TTCTTAGCCAGGTG--ATATTC-AGCAAC--ACTTCCCTCTG  1172