BAC Information

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BAC

Clone NameB6Ng01-306F10
Chromosome11 (Build37)
Map Location 63,840,766 - 63,978,090
singlet/doubletdoublet
Overlap geneCox10, 2810001G20Rik
Upstream geneTekt3, Pmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1
Downstream geneEG544785, Hs3st3a1, LOC626959, Elac2, AU040829, 1700086D15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306F10.bB6Ng01-306F10.g
ACCGA099403GA099404
length1071,042
definitionB6Ng01-306F10.b B6Ng01-306F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,977,985 - 63,978,090)(63,840,766 - 63,841,796)
sequence
gattctccatgtgttttcatgttcccttttacccttggatggtaatttta
aaaggacaaaattgtgaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtg
gaattcttttcaacttcatgtaaaagtattgctagttatttacttctaat
tagggaatacagaggacattttatttataacagtgttaaacacctcttat
ttccattgcttttaaagaacggtggctgaaagataacctctatgaagtag
ccaaacagggtatatggtaagacagtgatgtgaagacaccccagcacagg
agttttccaaggagggacctgagggccaagtgttcccgagctggccccac
gcacctgcagtctaatgaagctctctgagtgagagtgtttccagagtgaa
ctgtcgccaggtttgcggctgggctgtggtggtaacgccctaactgggaa
tgtgccttaggccttccttactccaggctccctaagtcccacagaatcaa
gtcagagctcttatcgtggcaattacgacactgaaaagaacaggccaact
gcttgctcccagcaccctgcacattcgaggcctctctatgtgtgtgtgtg
ctttccattccctcctacaacttctgactaaagtagaactggctggacta
ctgcttctgactaaaacacacttttcctcatctttatgtcccccacacaa
tccaactcaatgggtggcctctctaagcacctcactctctctacctcaga
agctagctataatctttctctgcgatatcacacaccactttgtttctctt
acttgttttctagcctgagttggcgttatctgtgaacattcctaacattt
cccaccttgctgctgaggcagagatgtctcgtttgcctctttccactaca
agatacaggtagaccatacaatggagcctcccttttacagacaaaccaaa
tcaaagaacagttctatcatccgtcccacgccacacagctagtgacagga
ttgcaggttacagttcctaaggcatcatgggcctagagcaggaccactgc
cggctgtttacatgggtctctgcattctcccactaacgtctactctggtt
taaaggcctcagtgtagaagctgcaggtggagagacagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63977985_63978090
seq2: B6Ng01-306F10.b_46_151 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACTTCACAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACTTCACAATTTT  50

seq1  GTCCTTTTAAAATTACCATCCAAGGGTAAAAGGGAACATGAAAACACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTTAAAATTACCATCCAAGGGTAAAAGGGAACATGAAAACACATG  100

seq1  GAGAAT  106
      ||||||
seq2  GAGAAT  106

seq1: chr11_63840766_63841796
seq2: B6Ng01-306F10.g_69_1110

seq1  GAATTCTTTTCAACTTCATGTAAAAGTATTGCTAGTTATTTACTTCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAACTTCATGTAAAAGTATTGCTAGTTATTTACTTCTAAT  50

seq1  TAGGGAATACAGAGGACATTTTATTTATAACAGTGTTAAACACCTCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATACAGAGGACATTTTATTTATAACAGTGTTAAACACCTCTTAT  100

seq1  TTCCATTGCTTTTAAAGAACGGTGGCTGAAAGATAACCTCTATGAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGCTTTTAAAGAACGGTGGCTGAAAGATAACCTCTATGAAGTAG  150

seq1  CCAAACAGGGTATATGGTAAGACAGTGATGTGAAGACACCCCAGCACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGGGTATATGGTAAGACAGTGATGTGAAGACACCCCAGCACAGG  200

seq1  AGTTTTCCAAGGAGGGACCTGAGGGCCAAGTGTTCCCGAGCTGGCCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCAAGGAGGGACCTGAGGGCCAAGTGTTCCCGAGCTGGCCCCAC  250

seq1  GCACCTGCAGTCTAATGAAGCTCTCTGAGTGAGAGTGTTTCCAGAGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCAGTCTAATGAAGCTCTCTGAGTGAGAGTGTTTCCAGAGTGAA  300

seq1  CTGTCGCCAGGTTTGCGGCTGGGCTGTGGTGGTAACGCCCTAACTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGCCAGGTTTGCGGCTGGGCTGTGGTGGTAACGCCCTAACTGGGAA  350

seq1  TGTGCCTTAGGCCTTCCTTACTCCAGGCTCCCTAAGTCCCACAGAATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTAGGCCTTCCTTACTCCAGGCTCCCTAAGTCCCACAGAATCAA  400

seq1  GTCAGAGCTCTTATCGTGGCAATTACGACACTGAAAAGAACAGGCCAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCTCTTATCGTGGCAATTACGACACTGAAAAGAACAGGCCAACT  450

seq1  GCTTGCTCCCAGCACCCTGCACATTCGAGGCCTCTCTATGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCCCAGCACCCTGCACATTCGAGGCCTCTCTATGTGTGTGTGTG  500

seq1  CTTTCCATTCCCTCCTACAACTTCTGACTAAAGTAGAACTGGCTGGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATTCCCTCCTACAACTTCTGACTAAAGTAGAACTGGCTGGACTA  550

seq1  CTGCTTCTGACTAAAACACACTTTTCCTCATCTTTATGTCCCCCACACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGACTAAAACACACTTTTCCTCATCTTTATGTCCCCCACACAA  600

seq1  TCCAACTCAATGGGTGGCCTCTCTAAGCACCTCACTCTCTCTACCTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCAATGGGTGGCCTCTCTAAGCACCTCACTCTCTCTACCTCAGA  650

seq1  AGCTAGCTATAATCTTTCTCTGCGATATCACACACCACTTTGTTTCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCTATAATCTTTCTCTGCGATATCACACACCACTTTGTTTCTCTT  700

seq1  ACTTGTTTTCTAGCCTGAGTTGGCGTTATCTGTGAACATTCCTAACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTTCTAGCCTGAGTTGGCGTTATCTGTGAACATTCCTAACATTT  750

seq1  CCCACCTTGCTGCTGAGGCAGAGATGTCTCGTTTGCCTCTTTCCACTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTGCTGCTGAGGCAGAGATGTCTCGTTTGCCTCTTTCCACTACA  800

seq1  AGATACAGGTAGACCATACAATGGAGCCTCCCTTTTACAGACAAACCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGGTAGACCATACAATGGAGCCTCCCTTTTACAGACAAACCAAA  850

seq1  TCAAAGAACAGTTCTATCATCCGTCCCACGCCACACAGCTAGTGACAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACAGTTCTATCATCCGTCCCACGCCACACAGCTAGTGACAGGA  900

seq1  TTGCA-GTTACAGTTCCT-AGGCATCAT-GGCCTAGAGCAGGA-CACTG-  945
      ||||| |||||||||||| ||||||||| |||||||||||||| ||||| 
seq2  TTGCAGGTTACAGTTCCTAAGGCATCATGGGCCTAGAGCAGGACCACTGC  950

seq1  CGGCTGTTAACAT-GGTCTCTGCATCTCCCCACTAACGTCTACTCT-GTT  993
      |||||||| |||| |||||||||||   |||||||||||||||||| |||
seq2  CGGCTGTTTACATGGGTCTCTGCATTCTCCCACTAACGTCTACTCTGGTT  1000

seq1  TAAA-GCCTCAGTGTAGAAGCTGCAG--TGAG-GACAGTAGT  1031
      |||| |||||||||||||||||||||   ||| |||||||||
seq2  TAAAGGCCTCAGTGTAGAAGCTGCAGGTGGAGAGACAGTAGT  1042