MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-307P14
Chromosome	18 (Build37)	11 (Build37)
Map Location	78,178,733 - 78,179,794	56,785,560 - 56,785,657
singlet/doublet	singlet	singlet
Overlap gene	5430411K18Rik
Upstream gene	Ier3ip1, Hdhd2, Katnal2, Pias2, EG639653, St8sia5, Loxhd1, Rnf165, 8030462N17Rik, 4930465K10Rik, Ccdc5, Atp5a1, Pstpip2
Downstream gene	Cd33l3, Slc14a1, Slc14a2, EG620155, Setbp1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ier3ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66191 MGI:1913441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdhd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Katnal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71206 MGI:1924234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pias2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17344 MGI:1096566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639653 MGI:3646549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St8sia5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225742 MGI:109243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Loxhd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240411 MGI:1914609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein

name	Rnf165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225743 MGI:2444521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 83 ESTs, 1 Protein

name	8030462N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212163 MGI:2444951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930465K10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67640 MGI:1914890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 1 Protein

name	Ccdc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225745 MGI:2385076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11946 MGI:88115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pstpip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19201 MGI:1335088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430411K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71423 MGI:1918673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 94 ESTs, 3 Proteins

name	Cd33l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620235 MGI:3646642
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Slc14a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108052 MGI:1351654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc14a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27411 MGI:1351653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG620155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620155 MGI:3647029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	Setbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240427 MGI:1933199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ier3ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365900 GeneID:66191 MGI:1913441
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : immediate early response 3 interacting protein 1 transcript_id : NM_025409.2

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861227 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_029826.2

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861234 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_001039202.1

name	Hdhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861230 GeneID:76987 MGI:1924237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : haloacid dehalogenase-like hydrolase domain containing 2 transcript_id : NM_001039201.1

name	Katnal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349930 GeneID:71206 MGI:1924234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p60 subunit A-like 2 transcript_id : NM_027721.2

name	Pias2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382362 GeneID:17344 MGI:1096566
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein inhibitor of activated STAT 2 transcript_id : NM_008602.3

name	EG639653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383481 GeneID:639653 MGI:3646549
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG639653 transcript_id : NM_001039252.2

name	St8sia5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24233503 GeneID:225742 MGI:109243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 transcript_id : NM_153124.1

name	Loxhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270193 GeneID:240411 MGI:1914609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein product : lipoxygenase homology domains 1 transcript_id : XM_001472179.1

name	Rnf165 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270195 GeneID:225743 MGI:2444521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 83 ESTs, 1 Protein product : ring finger protein 165 transcript_id : XM_129042.8

name	8030462N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87196344 GeneID:212163 MGI:2444951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8030462N17 gene transcript_id : NM_178670.3

name	Ccdc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130237 GeneID:225745 MGI:2385076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 5 transcript_id : NM_146089.2

name	Atp5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506325 GeneID:11946 MGI:88115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 transcript_id : NM_007505.2

name	Pstpip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506309 GeneID:19201 MGI:1335088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline-serine-threonine phosphatase-interacting protein 2 transcript_id : NM_013831.4

name	5430411K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270198 GeneID:71423 MGI:1918673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 94 ESTs, 3 Proteins product : RIKEN cDNA 5430411K18 gene transcript_id : XM_973419.2

name	Cd33l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270200 GeneID:620235 MGI:3646642
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : CD33 molecule-like 3 transcript_id : XM_884636.3

name	Slc14a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56118237 GeneID:108052 MGI:1351654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 14 (urea transporter), member 1 transcript_id : NM_028122.3

name	Slc14a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849766 GeneID:27411 MGI:1351653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 14 (urea transporter), member 2 transcript_id : NM_207651.2

name	Slc14a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130722 GeneID:27411 MGI:1351653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 14 (urea transporter), member 2 transcript_id : NM_030683.2

name	EG620155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270208 GeneID:620155 MGI:3647029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : predicted gene, EG620155 transcript_id : XM_884547.3

name	Setbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890214 GeneID:240427 MGI:1933199
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET binding protein 1 transcript_id : NM_053099.1

name	Ier3ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384796 GeneID:66191 MGI:1913441
definition	codon_start : 1 product : immediate early response 3 interacting protein 1 protein_id : NP_079685.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861231 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 2 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 1 protein_id : NP_001034290.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313310 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 1 protein_id : NP_084102.1

name	Hdhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861235 GeneID:76987 MGI:1924237
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3 product : haloacid dehalogenase-like hydrolase domain containing 2 isoform 2 protein_id : NP_001034291.1

name	Katnal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313044 GeneID:71206 MGI:1924234
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : katanin p60 subunit A-like 2 protein_id : NP_081997.1

name	Pias2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532974 GeneID:17344 MGI:1096566
definition	GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0019789 - SUMO ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016925 - protein sumoylation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006351 - transcription, DNA-dependent [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PIASxalpha6 product : Msx-interacting-zinc finger protein_id : NP_032628.2

name	EG639653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986673 GeneID:639653 MGI:3646549
definition	codon_start : 1 product : hypothetical protein LOC639653 protein_id : NP_001034341.1

name	St8sia5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233504 CCDS:CCDS29353.1 GeneID:225742 MGI:109243
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003828 - alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity [Evidence IDA]; GO:0008373 - sialyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform middle is encoded by transcript variant 2; sialyltransferase 8 (alpha-2, 8-sialyltransferase) E product : sialyltransferase 8E isoform middle protein_id : NP_694764.1

name	Loxhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270194 GeneID:240411 MGI:1914609
definition	codon_start : 1 product : lipoxygenase homology domains 1 protein_id : XP_001472229.1

name	Rnf165 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270196 GeneID:225743 MGI:2444521
definition	codon_start : 1 product : ring finger protein 165 protein_id : XP_129042.7

name	8030462N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87196345 CCDS:CCDS29355.1 GeneID:212163 MGI:2444951
definition	codon_start : 1 product : hypothetical protein LOC212163 protein_id : NP_848785.2

name	Ccdc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122593 CCDS:CCDS29357.1 GeneID:225745 MGI:2385076
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 note : spindle associated product : coiled-coil domain containing 5 protein_id : NP_666201.1

name	Atp5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680748 CCDS:CCDS29358.1 GeneID:11946 MGI:88115
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 protein_id : NP_031531.1

name	Pstpip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86355499 GeneID:19201 MGI:1335088
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence NAS] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence NAS] codon_start : 1 product : proline-serine-threonine phosphatase-interacting protein 2 protein_id : NP_038859.3

name	5430411K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270199 GeneID:71423 MGI:1918673
definition	codon_start : 1 product : hypothetical protein LOC71423 protein_id : XP_978513.2

name	Cd33l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270201 GeneID:620235 MGI:3646642
definition	codon_start : 1 product : hypothetical protein protein_id : XP_889729.3

name	Slc14a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16945964 CCDS:CCDS29360.1 GeneID:108052 MGI:1351654
definition	GO_component : GO:0016021 - integral to membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015204 - urea transporter activity [Evidence IMP]; GO:0005372 - water transporter activity [Evidence IDA] GO_process : GO:0006810 - transport [Evidence IEA]; GO:0015840 - urea transport [Evidence IMP]; GO:0006833 - water transport [Evidence IDA] codon_start : 1 note : solute carrier family 14 (urea transprorter), member 1 product : solute carrier family 14 (urea transporter), member 1 protein_id : NP_082398.1

name	Slc14a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559420 CCDS:CCDS29361.1 GeneID:27411 MGI:1351653
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0015204 - urea transporter activity [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : solute carrier family 14 (urea transporter), member 2 isoform a protein_id : NP_997534.1

name	Slc14a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507605 GeneID:27411 MGI:1351653
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0015204 - urea transporter activity [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : solute carrier family 14 (urea transporter), member 2 isoform b protein_id : NP_109608.1

name	EG620155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270209 GeneID:620155 MGI:3647029
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_889640.2

name	Setbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890215 CCDS:CCDS29362.1 GeneID:240427 MGI:1933199
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IDA] codon_start : 1 exception : mismatches in translation product : SET binding protein 1 protein_id : NP_444329.1

name	4930465K10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94405062 GeneID:67640 MGI:1914890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 1 Protein product : RIKEN cDNA 4930465K10 gene transcript_id : XR_002327.1

clone name	MSMg01-288P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095A07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-307P14.b	B6Ng01-307P14.g
ACC	GA100600	GA100601
length	1,060	153
definition	B6Ng01-307P14.b	B6Ng01-307P14.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(78,178,733 - 78,179,794)	(56,785,560 - 56,785,657)
sequence	gaattctaccagaacattaaagaagagctcactgcagtgccctccatact attccacagtcacaaggaggggtgctaccaaagtcattctatgagctgct gttaccctgacaccaaaaacacttaggggatgataaagaaaaccatggat gagttctctgatgaacacagaacaaagttctgagtagactgaattcatca gcaccatgaaatctgtgtttgctggaatcgtcaagtgtagaggtaactgc taatagccttgggtagagtcaaagtctctgtaagactctgttgctcgtct tctccctgctgtagaatgctttgggttaccactgtgaccggagtctgctc tcttccttggtgaactggattgtggcagggaacatcacgccttccttcgt ggagggcttgtccacgtccacacaggtatgaagcctcttgtgacctttgt acattttagttttgtcaccgtccttactgaggtcaggtcagggctgcgag gagaggttaagattgggtgtggggacggtggcccaggcttcagaccactt ctgccatttgctagctctgtgccttgggctgctgcttctctcttcagttt cctcacagtcagatgaatataactgaagctgtatgtatagcactcagaac agaccttagtcagcgctcgctgtgctttggccttgctcctgtcagaggag acagcagcagcagcttggccattactgcataaggcctgtctgtttcgtct cttaagccagtagtagcatccttcagtctcttagccttagtctcttagtc ctcctgggactgagctgacagcagttcctcactgctgcctagactgatgc ccacccccacctctgcttttgtgcttcactgacactctgaggccgccttt cctgccgagctctctactaccaagtgcagttctcatcatttcccccctag atcagcagttctcaactgtgggttgtgactcctttgagggttaaataacc cattcacagaagtcttctaagactatcaaaaaacagaatattcatataca attcataaca	caccttgttccactgatatttctagaggaaatttgtgtgtgtgtgtgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacatgcatgtgggcatacgt gtgcacgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt gtg
quality values	Open. Hide. 52 31 22 38 58 58 62 46 62 39 30 62 49 62 43 47 47 62 62 62 62 62 62 62 62 62 62 49 62 54 62 59 62 41 30 18 13 22 45 25 28 28 49 49 46 59 62 62 62 59 62 62 62 62 54 59 62 59 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 62 59 59 50 38 43 34 56 59 56 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 49 41 46 58 49 58 54 54 58 58 58 58 54 54 54 58 58 58 58 58 58 58 58 58 58 58 45 42 58 58 54 58 49 41 58 58 52 52 58 58 58 58 54 54 52 58 54 54 54 58 58 58 58 58 58 49 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 50 58 58 58 51 58 58 51 58 58 58 58 58 49 54 53 58 51 58 54 49 53 53 58 58 58 51 58 58 58 52 52 51 58 58 58 54 51 58 39 58 58 49 52 50 51 58 58 54 58 58 58 49 50 58 58 58 53 53 51 58 52 47 53 58 51 54 54 49 58 53 50 24 58 48 48 50 39 39 40 51 51 51 53 37 51 51 41 46 41 51 58 51 47 53 52 54 51 49 52 52 49 58 40 49 47 37 49 50 43 43 50 49 50 54 52 54 47 52 53 32 58 18 49 54 35 49 39 52 50 53 49 37 54 49 42 54 52 42 53 54 49 50 44 30 51 39 45 51 35 40 52 51 40 21 38 39 39 39 54 20 51 41 51 31 35 39 51 31 54 37 37 42 39 40 52 45 28 31 31 37 32 41 39 23 31 42 43 31 45 53 30 53 34 52 45 46 51 53 33 33 37 45 42 45 52 31 33 31 25 51 47 34 33 32 27 30 34 35 45 52 32 32 28 31 31 37 45 43 45 32 32 53 30 34 25 31 33 37 19 30 31 31 30 26 32 35 43 42 31 29 42 34 37 33 34 31 31 31 33 33 31 31 26 41 30 31 31 29 21 30 41 33 26 30 23 51 40 30 35 46 46 41 29 26 31 31 31 43 36 42 31 29 48 48 31 41 19 27 31 31 30 21 20 26 32 35 32 32 23 28 42 31 31 27 39 15 30 7 30 27 31 32 36 48 37 27 29 24 31 17 39 30 37 23 31 32 23 21 24 30 24 28 31 34 33 30 9 37 32 31 37 27 34 31 28 33 31 33 31 33 32 32 31 31 47 29 32 41 36 41 33 20 26 34 33 38 32 33 25 31 35 27 21 21 22 37 21 21 26 29 12 9 6 5 10 34 12 10 7 24 19 15 25 21 21 19 33 16 39 33 30 6 5 29 29 9 25 25 39 23 30 31 27 14 37 7 8 26 17 32 16 14 5 11 22 28 18 16 4 13 5 9 19 14 7 16 27 20 28 16 21 18 13 21 16 34 30 17 8 10 19 28 6 6 6 14 25 10 5 11 10 21 4 12 10 13 18 14 19 9 9 21 5 19 8	Open. Hide. 49 24 62 62 62 14 21 15 17 24 14 11 13 21 18 26 34 49 49 56 56 59 62 59 59 62 62 59 62 62 43 27 62 59 59 59 59 59 59 43 59 59 59 59 59 59 59 46 59 59 43 39 29 23 23 23 36 33 36 31 32 36 59 59 59 54 59 59 59 59 59 49 59 59 59 59 59 49 49 51 56 51 51 49 59 51 51 59 59 49 59 59 56 59 49 59 62 54 43 46 48 50 59 51 49 49 49 56 56 59 59 51 49 49 49 34 43 43 39 43 56 51 49 49 49 49 49 49 59 49 59 49 59 43 49 32 39 30 34 22 23 22 33 32 39 34 36 22 28 17 28 20 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_78178733_78179794
seq2: B6Ng01-307P14.b_46_1105

seq1  GAATTCTACCAGAACATTAAAGAAGAGCTCACTGCAGTGCCCTCCATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCAGAACATTAAAGAAGAGCTCACTGCAGTGCCCTCCATACT  50

seq1  ATTCCACAGTCACAAGGAGGGGTGCTACCAAAGTCATTCTATGAGCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAGTCACAAGGAGGGGTGCTACCAAAGTCATTCTATGAGCTGCT  100

seq1  GTTACCCTGACACCAAAAACACTTAGGGGATGATAAAGAAAACCATGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCTGACACCAAAAACACTTAGGGGATGATAAAGAAAACCATGGAT  150

seq1  GAGTTCTCTGATGAACACAGAACAAAGTTCTGAGTAGACTGAATTCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTCTGATGAACACAGAACAAAGTTCTGAGTAGACTGAATTCATCA  200

seq1  GCACCATGAAATCTGTGTTTGCTGGAATCGTCAAGTGTAGAGGTAACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATGAAATCTGTGTTTGCTGGAATCGTCAAGTGTAGAGGTAACTGC  250

seq1  TAATAGCCTTGGGTAGAGTCAAAGTCTCTGTAAGACTCTGTTGCTCGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCCTTGGGTAGAGTCAAAGTCTCTGTAAGACTCTGTTGCTCGTCT  300

seq1  TCTCCCTGCTGTAGAATGCTTTGGGTTACCACTGTGACCGGAGTCTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGCTGTAGAATGCTTTGGGTTACCACTGTGACCGGAGTCTGCTC  350

seq1  TCTTCCTTGGTGAACTGGATTGTGGCAGGGAACATCACGCCTTCCTTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTGGTGAACTGGATTGTGGCAGGGAACATCACGCCTTCCTTCGT  400

seq1  GGAGGGCTTGTCCACGTCCACACAGGTATGAAGCCTCTTGTGACCTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTTGTCCACGTCCACACAGGTATGAAGCCTCTTGTGACCTTTGT  450

seq1  ACATTTTAGTTTTGTCACCGTCCTTACTGAGGTCAGGTCAGGGCTGCGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAGTTTTGTCACCGTCCTTACTGAGGTCAGGTCAGGGCTGCGAG  500

seq1  GAGAGGTTAAGATTGGGTGTGGGGACGGTGGCCCAGGCTTCAGACCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTAAGATTGGGTGTGGGGACGGTGGCCCAGGCTTCAGACCACTT  550

seq1  CTGCCATTTGCTAGCTCTGTGCCTTGGGCTGCTGCTTCTCTCTTCAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTTGCTAGCTCTGTGCCTTGGGCTGCTGCTTCTCTCTTCAGTTT  600

seq1  CCTCACAGTCAGATGAATATAACTGAAGCTGTATGTATAGCACTCAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGTCAGATGAATATAACTGAAGCTGTATGTATAGCACTCAGAAC  650

seq1  AGACCTTAGTCAGCGCTCGCTGTGCTTTGGCCTTGCTCCTGTCAGAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTAGTCAGCGCTCGCTGTGCTTTGGCCTTGCTCCTGTCAGAGGAG  700

seq1  ACAGCAGCAGCAGCTTGGCCATTACTGCATAAGGCCTGTCTGTTTCGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCAGCAGCTTGGCCATTACTGCATAAGGCCTGTCTGTTTCGTCT  750

seq1  CTTAAGCCAGTAGTAGCATCCTTCAGTCTCTTAGCCTTAGTCTCTTAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCCAGTAGTAGCATCCTTCAGTCTCTTAGCCTTAGTCTCTTAGTC  800

seq1  CTCCTGGGACTGAGCTGACAGCAGTTCCTCACTGCTGCCTAGACTGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGACTGAGCTGACAGCAGTTCCTCACTGCTGCCTAGACTGATGC  850

seq1  CCACCCCCACCTCTGCTTTTGTGCTTCACTGACACTCTGAGGCCGCCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCACCTCTGCTTTTGTGCTTCACTGACACTCTGAGGCCGCCTTT  900

seq1  CCTGCCGAGCTCTCTACTACCAAGTGCAGTTCTCATCATTTCCCCCCTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGAGCTCTCTACTACCAAGTGCAGTTCTCATCATTTCCCCCCTAG  950

seq1  ATCAGCAGTTCTCAAACTGTGGGTTGTGACTCCTTTGAGGGGTTAAATAA  1000
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  ATCAGCAGTTCTC-AACTGTGGGTTGTGACTCCTTTGA-GGGTTAAATAA  998

seq1  CCCATTCACAGAAGTCTTCTAAGACTATCAAAAAACAG-ATATTCATATT  1049
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  CCCATTCACAGAAGTCTTCTAAGACTATCAAAAAACAGAATATTCATA-T  1047

seq1  ACAATTCATAACA  1062
      |||||||||||||
seq2  ACAATTCATAACA  1060

seq1: chr11_56785560_56785657
seq2: B6Ng01-307P14.g_104_223 (reverse)

seq1  CACACACACACACACACACACACACACACACACACGCACACACGCA----  46
      ||||||||||||||||||||||||||||||||||||||||||| ||    
seq2  CACACACACACACACACACACACACACACACACACGCACACACACACGTG  50

seq1  CACAC------------------GCACACACACACACACACACACACACA  78
      |||||                  |||||||||||||||||||||||||||
seq2  CACACGTATGCCCACATGCATGTGCACACACACACACACACACACACACA  100

seq1  CACACACACACACACACACA  98
      ||||||||||||||||||||
seq2  CACACACACACACACACACA  120

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information