BAC Information

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BAC

Clone NameB6Ng01-313C05
Chromosome11 (Build37)
Map Location 90,570,655 - 90,571,686
singlet/doubletsinglet
Overlap genenone
Upstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1
Downstream geneLOC638903, EG664976, Kif2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313C05.bB6Ng01-313C05.g
ACCGA104433GA104434
length1,0361,205
definitionB6Ng01-313C05.b B6Ng01-313C05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctaatggattgtcctgcttgcattatttctttcttgttattt
attagtagtaacattaattgtacagagtaggagtttgttagaacatttct
acgtgtgcatgtagtatatactttgatctcactcagtctctctgttattc
tttctcttccctccacccctttcttccttcaccccatctccttctaatag
cccagtccttactgccatgcctctctacatccctagagtctgcacgagag
agagagagacagagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagagagaagcacatgatgctatcttgtggg
cctggattattcacttttgtccattttccagaaaacaacatggttttgtt
ctttcttgctctataaatttcaattgtctataagtactacatttaaaaaa
aatccattcattcaccgattgaacatgcgagctgattttataactcaact
gcttccgaaatcatactgcaaaaaatatatattccacgttggggggaata
tatccagaagccatatggctggatcctaggaagttccacctttaatgttt
ctgagtaattcccacactggtttccattgtggttacaaaatttacatcct
gctcagcccccacccctgccaaatagccaatgagatttattgtttttgtt
tctcttgatgatggccattctgcatctggaagagtgagaatctctgagta
gttcacagttccctgcagttcagggcgtggagcaccttggcatgtttgta
ttaaccatttatacgtccttattcatacagtggctgtagcttgtcatgat
tttattaaccatttatacgtctttattcgtacagtggctgtagagctcag
ctacacatttgtggagtggactaattcgatcctttgcttgccggttgact
tttttgaggttctctcacttccttggagggccacgccctttgctgctgat
tactagaagaatttctacagactcatccttccatct

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaaat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
ttccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatttactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggaccctatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagaagaaagtagccaaggagctaaagggatctacaaccc
tatagatggatagatggaacacatatgactaaccagtaccccggagctct
tgactctagctgcatattgttatcaaaagaatggctagtcgtcatcactg
ggaaagagaaggccatggactgcaactttaattgcccagatacatggtac
ccagctaacggaattgctgtcccaggaaagtgtgggcgtccacctataag
ccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_90570655_90571686
seq2: B6Ng01-313C05.b_43_1078

seq1  GAATTCTCCTAATGGATTGTCCTGCTTGCATTATTTCTTTCTTGTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAATGGATTGTCCTGCTTGCATTATTTCTTTCTTGTTATTT  50

seq1  ATTAGTAGTAACATTAATTGTACAGAGTAGGAGTTTGTTAGAACATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGTAACATTAATTGTACAGAGTAGGAGTTTGTTAGAACATTTCT  100

seq1  ACGTGTGCATGTAGTATATACTTTGATCTCACTCAGTCTCTCTGTTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGCATGTAGTATATACTTTGATCTCACTCAGTCTCTCTGTTATTC  150

seq1  TTTCTCTTCCCTCCACCCCTTTCTTCCTTCACCCCATCTCCTTCTAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCCCTCCACCCCTTTCTTCCTTCACCCCATCTCCTTCTAATAG  200

seq1  CCCAGTCCTTACTGCCATGCCTCTCTACATCCCTAGAGTCTGCACGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCTTACTGCCATGCCTCTCTACATCCCTAGAGTCTGCACGAGAG  250

seq1  AGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  300

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAAGCACATGATGCTATCTTGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAAGCACATGATGCTATCTTGTGGG  350

seq1  CCTGGATTATTCACTTTTGTCCATTTTCCAGAAAACAACATGGTTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATTATTCACTTTTGTCCATTTTCCAGAAAACAACATGGTTTTGTT  400

seq1  CTTTCTTGCTCTATAAATTTCAATTGTCTATAAGTACTACATTTAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGCTCTATAAATTTCAATTGTCTATAAGTACTACATTTAAAAAA  450

seq1  AATCCATTCATTCACCGATTGAACATGCGAGCTGATTTTATAACTCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTCATTCACCGATTGAACATGCGAGCTGATTTTATAACTCAACT  500

seq1  GCTTCCGAAATCATACTGCAAAAAATATATATTCCACGTTGGGGGGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCGAAATCATACTGCAAAAAATATATATTCCACGTTGGGGGGAATA  550

seq1  TATCCAGAAGCCATATGGCTGGATCCTAGGAAGTTCCACCTTTAATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAAGCCATATGGCTGGATCCTAGGAAGTTCCACCTTTAATGTTT  600

seq1  CTGAGTAATTCCCACACTGGTTTCCATTGTGGTTACAAAATTTACATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAATTCCCACACTGGTTTCCATTGTGGTTACAAAATTTACATCCT  650

seq1  GCTCAGCCCCCACCCCTGCCAAATAGCCAATGAGATTTATTGTTTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCCCCACCCCTGCCAAATAGCCAATGAGATTTATTGTTTTTGTT  700

seq1  TCTCTTGATGATGGCCATTCTGCATCTGGAAGAGTGAGAATCTCTGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGATGATGGCCATTCTGCATCTGGAAGAGTGAGAATCTCTGAGTA  750

seq1  GTTCACAGTTCCCTGCAGGTTCAGGGCGTGGAGCACCTTGGCATGTTTGT  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTCACAGTTCCCTGCA-GTTCAGGGCGTGGAGCACCTTGGCATGTTTGT  799

seq1  ATTAACCATTTATACGTCCTTATTCATACAGTGGCTGTAGCTTGTCATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCATTTATACGTCCTTATTCATACAGTGGCTGTAGCTTGTCATGA  849

seq1  TTTTATTAACCATTTATACGTCTTTATTCGTACAGTGGCTGTAGAGCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAACCATTTATACGTCTTTATTCGTACAGTGGCTGTAGAGCTCA  899

seq1  GCTACACATTTGTGGAGTGGACT-ATTCGATCCTTTGCTTG-CGGTTGAC  948
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GCTACACATTTGTGGAGTGGACTAATTCGATCCTTTGCTTGCCGGTTGAC  949

seq1  TTTTTTGAGG-TCTCTCACTTCC-TGGAGGGCCACGCCC-TTGCTGCTGA  995
      |||||||||| |||||||||||| ||||||||||||||| ||||||||||
seq2  TTTTTTGAGGTTCTCTCACTTCCTTGGAGGGCCACGCCCTTTGCTGCTGA  999

seq1  TTACTAGGAAGATTTCT-CAGACTCCTTCTCTCCATCT  1032
      ||||||| |  |||||| ||||||| | || |||||||
seq2  TTACTAGAAGAATTTCTACAGACTCATCCT-TCCATCT  1036


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