BAC Information

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BAC

Clone NameB6Ng01-314N14
Chromosome11 (Build37)
Map Location 40,323,389 - 40,324,542
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039241
Downstream geneLOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256, LOC100039285, Hspd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314N14.bB6Ng01-314N14.g
ACCGA105653GA105654
length1,1481,144
definitionB6Ng01-314N14.b B6Ng01-314N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaggaacacagatttccagatcttatccaaggcctaatgact
ctacatctctatgcggtgaactaagaaatctataactaacaaacaaccca
ggtggttgtgatgcagtcaacctagctgttatcaccaaatgagcatttgg
gaccctcccctctgcagaccctatcaagtcaagccaaatgtttgggatca
aacacactgcttccagaacacagcctcagctccacctccctgactgagag
agcaggtctcagataaagcaatgggttccccagtggggactttcaaagta
gaggaaagcaagcataaggtctgcagtgggaagagatgctcctgagcaca
tgaagcaaatattcaactacccctttcacatttgattagatcttcaattg
aaaatcacttttcagccattttacaggaagcaaaatccatttccacctcc
atctggtgccaaaattaacaaactgaaaaccgccaaccagttcaggcctg
cctaactttagcttagaacaggcactagagcaccccaaatcattctgcag
tgagagaggaaggtttgtttactcctgaacaccagaggccatgggtaaga
cctgcagataaacaaaatcaagtgtccaatccgctccagtctctgagggt
ccactctccattcagaagccgaaggcatcaggagatgggctaagctgacc
atctgttcttctctcggataatatgtaattaagtaatttatttattcagc
acttgaacctcctcctctctcctcccattagtcagggatgattatgccag
acccagctgtagttaacatattgtacactcaggcaagcactatgctacaa
agcactctgctagcctcctggctatggccacctctcagacccaaccatag
gagtgccggcatgaggcttgccactctgctagctcaactctcttccccaa
cgattaggcagctttctcctgctgtgcattaaaccatttgctctgcgaat
tcattcatttgtcaagattaatttacccacatcctctgatcacttcgacc
aggccagctgactagctggcaagactgatggattttttccatctggtgat
tttattctgtgaattagcaccgaatgtaacacagagtctgaacataca
gaattcagtcatctgaaggcttctgccttcagagtactggaatcaaaggt
gtacactaccatacccagcccccccccccgtttttgtgatatttatttat
ttatttatttattgttgtatcttttttgaagagagagaaggctcagtggg
taggacggatctgagaggagtaatgagaagaggaaatatgatcaaataat
aaaaaatttttaaataaattaaaacagaattaagggggaaagatttgaac
atttagtgatgtctcttaaactctttgccttggttgtgttttgaagccag
caatgtcatccagaacttccaatgacaccaattcttttagggaaatggct
catttcagggacagaaataaaaaataaacatagactaaattgatacaaga
aaggtatgcttggaaaacataatatcaagaggactcaggaactaatttga
aaaaaaaaaatcccccaagggccaaaccttagggcaattttagtaaaaag
taatgatacttttagctcatagaattataagtgaatcttgagatcatggg
acagatcctacttcctccagaattccaacacagaagtagcaattgcagag
gagggaacagaagcttgcttttgtgctaaccacagtaacgcttgctgcag
ggagtcatcactgaggatactagaagtagtgggtgaaatcacatatttat
atcatatgtagttgtcactcatcaaaaacaatcaatatttacaccaggaa
aaagagtaaccctgcagtgaagaagccttacggtggcatctttctaagta
gatcagagttagcgtgaccagtcatgagacatactgacacacacctcttg
aaatgatgagataagaaagagacatagtggggctggagaggtggctcagc
agttcagaacactgactgttcttccagaggtcctgagttcaattcccagc
aaccacatggtggctcacaccatctgtatgggatcagatgccctctctgg
tgtgtctgaatacagctataatgtattatataacaatggaaataatattc
ctatttaattaaaaaaggaagagcataggttaatgtaggcactctcacag
aatataccatatctgattcaatgagaaattcccaggaccaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40323389_40324542
seq2: B6Ng01-314N14.b_48_1195

seq1  GAATTCTTCAGGAACACAGATTTCCAGATCTTATCCAAGGCCTAATGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGAACACAGATTTCCAGATCTTATCCAAGGCCTAATGACT  50

seq1  CTACATCTCTATGCGGTGAACTAAGAAATCTATAACTAACAAACAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCTCTATGCGGTGAACTAAGAAATCTATAACTAACAAACAACCCA  100

seq1  GGTGGTTGTGATGCAGTCAACCTAGCTGTTATCACCAAATGAGCATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGTGATGCAGTCAACCTAGCTGTTATCACCAAATGAGCATTTGG  150

seq1  GACCCTCCCCTCTGCAGACCCTATCAAGTCAAGCCAAATGTTTGGGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCCCCTCTGCAGACCCTATCAAGTCAAGCCAAATGTTTGGGATCA  200

seq1  AACACACTGCTTCCAGAACACAGCCTCAGCTCCACCTCCCTGACTGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTGCTTCCAGAACACAGCCTCAGCTCCACCTCCCTGACTGAGAG  250

seq1  AGCAGGTCTCAGATAAAGCAATGGGTTCCCCAGTGGGGACTTTCAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCTCAGATAAAGCAATGGGTTCCCCAGTGGGGACTTTCAAAGTA  300

seq1  GAGGAAAGCAAGCATAAGGTCTGCAGTGGGAAGAGATGCTCCTGAGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGCAAGCATAAGGTCTGCAGTGGGAAGAGATGCTCCTGAGCACA  350

seq1  TGAAGCAAATATTCAACTACCCCTTTCACATTTGATTAGATCTTCAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAATATTCAACTACCCCTTTCACATTTGATTAGATCTTCAATTG  400

seq1  AAAATCACTTTTCAGCCATTTTACAGGAAGCAAAATCCATTTCCACCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACTTTTCAGCCATTTTACAGGAAGCAAAATCCATTTCCACCTCC  450

seq1  ATCTGGTGCCAAAATTAACAAACTGAAAACCGCCAACCAGTTCAGGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGCCAAAATTAACAAACTGAAAACCGCCAACCAGTTCAGGCCTG  500

seq1  CCTAACTTTAGCTTAGAACAGGCACTAGAGCACCCCAAATCATTCTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTTAGCTTAGAACAGGCACTAGAGCACCCCAAATCATTCTGCAG  550

seq1  TGAGAGAGGAAGGTTTGTTTACTCCTGAACACCAGAGGCCATGGGTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGGAAGGTTTGTTTACTCCTGAACACCAGAGGCCATGGGTAAGA  600

seq1  CCTGCAGATAAACAAAATCAAGTGTCCAATCCGCTCCAGTCTCTGAGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGATAAACAAAATCAAGTGTCCAATCCGCTCCAGTCTCTGAGGGT  650

seq1  CCACTCTCCATTCAGAAGCCGAAGGCATCAGGAGATGGGCTAAGCTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTCCATTCAGAAGCCGAAGGCATCAGGAGATGGGCTAAGCTGACC  700

seq1  ATCTGTTCTTCTCTCGGATAATATGTAATTAAGTAATTTATTTATTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCTTCTCTCGGATAATATGTAATTAAGTAATTTATTTATTCAGC  750

seq1  ACTTGAACCTCCTCCTCTCTCCTCCCATTAGTCAGGGATGATTATGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAACCTCCTCCTCTCTCCTCCCATTAGTCAGGGATGATTATGCCAG  800

seq1  ACCCAGCTGTAGTTAACATATTGTACACTCAGGCAAGCACTATGCTACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCTGTAGTTAACATATTGTACACTCAGGCAAGCACTATGCTACAA  850

seq1  AGCACTCTGCTAGCCTCCTGGCTATGGCCACCTCTCAGACCCAACCATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTGCTAGCCTCCTGGCTATGGCCACCTCTCAGACCCAACCATAG  900

seq1  GAGTGCCGGCATGAGGCTTGCCACTCTGCTAGCTCAACTCTCTTCCCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCGGCATGAGGCTTGCCACTCTGCTAGCTCAACTCTCTTCCCCAA  950

seq1  CGATTAGGCAGCTTTCTCCTGCTGTGCATTAAACCATTTGCTCTGCGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTAGGCAGCTTTCTCCTGCTGTGCATTAAACCATTTGCTCTGCGAAT  1000

seq1  TCATTCATTTGTTCAAAGATTAATTTACCCACATCCTCTGATCACTTCGA  1050
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TCATTCATTTGT--CAAGATTAATTTACCCACATCCTCTGATCACTTCGA  1048

seq1  CCAGGCCAGCTGACTAGCTGGGCAGGACTGATGGATTTTTTCCCATCTGG  1100
      ||||||||||||||||||| |||| |||||||||||||||| ||||||||
seq2  CCAGGCCAGCTGACTAGCT-GGCAAGACTGATGGATTTTTT-CCATCTGG  1096

seq1  TGAATTTTATCTGTGATATAAACAAACACAAATGT-ACACAGAGTCTG-A  1148
      ||| |||  ||||||| || | ||    | ||||| |||||||||||| |
seq2  TGATTTTATTCTGTGA-ATTAGCA---CCGAATGTAACACAGAGTCTGAA  1142

seq1  CATACA  1154
      ||||||
seq2  CATACA  1148