BAC Information

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BAC

Clone NameB6Ng01-315B17
Chromosome11 (Build37)
Map Location 13,020,078 - 13,151,528
singlet/doubletdoublet
Overlap genenone
Upstream geneCobl, LOC627244
Downstream geneLOC432535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315B17.bB6Ng01-315B17.g
ACCGA105843GA105844
length4371,159
definitionB6Ng01-315B17.b B6Ng01-315B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,151,086 - 13,151,528)(13,020,078 - 13,021,315)
sequence
caagaatctattcgtcttgatcttcctagcattgacttgtagacaaaatc
ctccatgctcatgtttctgtacaggttctgggaatttaacttttgtcttg
actctagctttagctgtctccctggcctttttcattattaattacagaaa
atttctggaatttctaatcatgtctcaaaaattgggactaataataaaag
atttattttgtgtttttcaaagcaactttatcctttgaactcattgaatt
tcaccttttttagatcataccatatatatatatagcattcaaagggtcaa
gagaggatagacacacaaatcttactagtgtcagaagcacctggcatgac
caccatagagaaccacagtcttgtaatgtgtgtctctgccttgtgtggat
acaacatgtaactgacattgtcaacttatgaaatgaa

gaattcaatgaacacaattaaattaggcttctgttctttagaattcaggg
taggtaggtatgtgatgtttcagggaaaaagcaattctacaagaaaaatt
gaaaacctaaagatttaaggatcatgtccaaaattcaggtggatatttct
aatgttcaaattagttcactctaaataattattaattaacttatttattt
attatgtgcttacttggtagaaagcattgggagaagtctcaaaggttact
taatagttcttttccacctccaaatgccttatatgaacacagtaaattaa
tatgttaaaatttcctaaataaagtcctatcttccctgaagtaaactctg
catttctgttcaaatttcaagaaagtgaggaaagagaattgaggagagca
gcatctttgcttttcaaagctgttttgctgtctccccacagacagagctc
attcttcagagtgctatctttgcttttggtgtatcatcacagcaaaccag
aatctgagtttgctccttcttttgttgagagcaatgattcggtttttatc
taagaagtcttgactttgggaagttctgttctctcactcttttctttagt
gtttctccatcctaatctcatcactttgagttcttttggattctgagtga
agttaaagtacttagggattaattagaaagaaatgcaatgtcaagagttt
ctttgaagaaacatatggcgagaatttgttttgtttcctgtgtgccagaa
tcaattggggtgacatttgctgtgactcacagcactgggaatatagaatc
tgaagaggccacctcttgtagccaggcaggaatccaagtggagtaacagg
gacaccaacccacccacaaaacttccttttttattggacattttatgtat
ttatatttcaaatgttattccctctcctcttcccccttcccctgcttcta
tgaggatgatccccctcctacccacccatgcccaccttactgcctggaca
ctcccctacactggggaattgaaccttcacaggaccaagggcttctcctc
ttattgatgggcagaacatgcatcctctgctacaacatgctgcttggagc
caatggattccctcttaaggtaactctgtgtagttagtccatggaagctc
tctgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13151086_13151528
seq2: B6Ng01-315B17.b_47_489 (reverse)

seq1  TTCATTTCATAAGTTGACAATGTCAGTTACATGTTGTATCCACACAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCATAAGTTGACAATGTCAGTTACATGTTGTATCCACACAAGGC  50

seq1  AGAGACACACATTACAAGACTGTGGTTCTCTATGGTGGTCATGCCAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACACATTACAAGACTGTGGTTCTCTATGGTGGTCATGCCAGGTG  100

seq1  CTTCTGACACTAGTAAGATTTGTGTGTCTATCCTCTCTTGACCCTTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACACTAGTAAGATTTGTGTGTCTATCCTCTCTTGACCCTTTGAA  150

seq1  TGCTATATATATATATGGTATGATCTAAAAAAGGTGAAATTCAATGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATATATATATGGTATGATCTAAAAAAGGTGAAATTCAATGAGTT  200

seq1  CAAAGGATAAAGTTGCTTTGAAAAACACAAAATAAATCTTTTATTATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATAAAGTTGCTTTGAAAAACACAAAATAAATCTTTTATTATTAG  250

seq1  TCCCAATTTTTGAGACATGATTAGAAATTCCAGAAATTTTCTGTAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTTTTGAGACATGATTAGAAATTCCAGAAATTTTCTGTAATTAA  300

seq1  TAATGAAAAAGGCCAGGGAGACAGCTAAAGCTAGAGTCAAGACAAAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAAAGGCCAGGGAGACAGCTAAAGCTAGAGTCAAGACAAAAGTT  350

seq1  AAATTCCCAGAACCTGTACAGAAACATGAGCATGGAGGATTTTGTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCCAGAACCTGTACAGAAACATGAGCATGGAGGATTTTGTCTACA  400

seq1  AGTCAATGCTAGGAAGATCAAGACGAATAGATTCTTGGAATTC  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGCTAGGAAGATCAAGACGAATAGATTCTTGGAATTC  443


seq1: chr11_13020078_13021315
seq2: B6Ng01-315B17.g_66_1224

seq1  GAATTCAATGAACACAATTAAATTAGGCTTCTGTTCTTTAGAATTCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAACACAATTAAATTAGGCTTCTGTTCTTTAGAATTCAGGG  50

seq1  TAGGTAGGTATGTGATGTTTCAGGGAAAAAGCAATTCTACAAGAAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGTATGTGATGTTTCAGGGAAAAAGCAATTCTACAAGAAAAATT  100

seq1  GAAAACCTAAAGATTTAAGGATCATGTCCAAAATTCAGGTGGATATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTAAAGATTTAAGGATCATGTCCAAAATTCAGGTGGATATTTCT  150

seq1  AATGTTCAAATTAGTTCACTCTAAATAATTATTAATTAACTTATTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCAAATTAGTTCACTCTAAATAATTATTAATTAACTTATTTATTT  200

seq1  ATTATGTGCTTACTTGGTAGAAAGCATTGGGAGAAGTCTCAAAGGTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGCTTACTTGGTAGAAAGCATTGGGAGAAGTCTCAAAGGTTACT  250

seq1  TAATAGTTCTTTTCCACCTCCAAATGCCTTATATGAACACAGTAAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTTCTTTTCCACCTCCAAATGCCTTATATGAACACAGTAAATTAA  300

seq1  TATGTTAAAATTTCCTAAATAAAGTCCTATCTTCCCTGAAGTAAACTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAAATTTCCTAAATAAAGTCCTATCTTCCCTGAAGTAAACTCTG  350

seq1  CATTTCTGTTCAAATTTCAAGAAAGTGAGGAAAGAGAATTGAGGAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTTCAAATTTCAAGAAAGTGAGGAAAGAGAATTGAGGAGAGCA  400

seq1  GCATCTTTGCTTTTCAAAGCTGTTTTGCTGTCTCCCCACAGACAGAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTGCTTTTCAAAGCTGTTTTGCTGTCTCCCCACAGACAGAGCTC  450

seq1  ATTCTTCAGAGTGCTATCTTTGCTTTTGGTGTATCATCACAGCAAACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAGAGTGCTATCTTTGCTTTTGGTGTATCATCACAGCAAACCAG  500

seq1  AATCTGAGTTTGCTCCTTCTTTTGTTGAGAGCAATGATTCGGTTTTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGTTTGCTCCTTCTTTTGTTGAGAGCAATGATTCGGTTTTTATC  550

seq1  TAAGAAGTCTTGACTTTGGGAAGTTCTGTTCTCTCACTCTTTTCTTTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTCTTGACTTTGGGAAGTTCTGTTCTCTCACTCTTTTCTTTAGT  600

seq1  GTTTCTCCATCCTAATCTCATCACTTTGAGTTCTTTTGGATTCTGAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCCATCCTAATCTCATCACTTTGAGTTCTTTTGGATTCTGAGTGA  650

seq1  AGTTAAAGTACTTAGGGATTAATTAGAAAGAAATGCAATGTCAAGAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGTACTTAGGGATTAATTAGAAAGAAATGCAATGTCAAGAGTTT  700

seq1  CTTTGAAGAAACATATGGCGAGAATTTGTTTTGTTTCCTGTGTGCCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAAACATATGGCGAGAATTTGTTTTGTTTCCTGTGTGCCAGAA  750

seq1  TCAATTGGGGTGACATTTGCTGTGACTCACAGCACTGGGAATATAGAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGGGGTGACATTTGCTGTGACTCACAGCACTGGGAATATAGAATC  800

seq1  TGAAGAGGCCACCTCTTGTAGCCAGGCAGGAATCCAAGTGGAGTAACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGCCACCTCTTGTAGCCAGGCAGGAATCCAAGTGGAGTAACAGG  850

seq1  GACACCAACCCACCCACAAAACTTCCTTTTTTATTGGACATTTTATGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAACCCACCCACAAAACTTCCTTTTTTATTGGACATTTTATGTAT  900

seq1  TTATATTTCAAATGTTATTCCCTCTCCTCTTCCCCCTTCCCCTGCTTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCAAATGTTATTCCCTCTCCTCTTCCCCCTTCCCCTGCTTCTA  950

seq1  TGAGGATGATCCCCCTCCTACCCACCCATGCCCACCTTACTGCCCTGACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TGAGGATGATCCCCCTCCTACCCACCCATGCCCACCTTACTGCCTGGACA  1000

seq1  CTCCCCTACACTGGGGAATTGAACCTTCACAGGACCAAGGGCTTCTCCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACACTGGGGAATTGAACCTTCACAGGACCAAGGGCTTCTCCTC  1050

seq1  TTATTGAT-GGCAGACAATTGCATCCTCTGCTAC-ACATGCTGC-TGGAG  1097
      |||||||| |||||| |  ||||||||||||||| ||||||||| |||||
seq2  TTATTGATGGGCAGA-ACATGCATCCTCTGCTACAACATGCTGCTTGGAG  1099

seq1  CCATGGG--TCCCTC-TAAGTGTACTCTTTGGTTGGTAGTTTAGTCCATG  1144
      |||  ||  |||||| ||||   ||||| |     |||| ||||||||||
seq2  CCAATGGATTCCCTCTTAAGGTAACTCTGT-----GTAG-TTAGTCCATG  1143

seq1  GGAGCTCTGGGGGCGAGGGGTTGGTTGATTGATATTGTTTTTCTTCTTTT  1194
      | ||||||  |||   |||                               
seq2  GAAGCTCTCTGGG---GGG-------------------------------  1159

seq1  GACCCAAAACTTATCCTGTCCACAAGAAATGCAGGGATGGGGGG  1238
                                                  
seq2  --------------------------------------------  1159


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