BAC Information

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BAC

Clone NameB6Ng01-317O05
Chromosome11 (Build37)
Map Location 92,298,911 - 92,300,127
singlet/doubletsinglet
Overlap genenone
Upstream geneKif2b
Downstream geneLOC382545, LOC100039286, Car10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317O05.bB6Ng01-317O05.g
ACCGA107917GA107918
length1,2241,171
definitionB6Ng01-317O05.b B6Ng01-317O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatggggttatttgaatc
tgaatttcagcttcttgagatctttgtatatattggatattagtccccta
tcagatttaggattggtacatatcctttcccaatctgttggtggcctttt
tctctcattgaaagtgtcttttgtcctacaaaagctttacaattttatga
ggtcccatttgtcaatattttatctaacagtacaagccattgctgttctg
tttaggaatgcttcccctgtgcccataccttcaaggctttttcccacttt
ctcctgtattattttcagtgtctctggttttatgtggaggtctttgatcc
acttatacttgagctttttacaaggagataagaatggatcaattcacatt
cttctacatgataactgccagttgtgccagcaccatttgttgaaaatgct
gtcttttttctgctggatggttttagctccgttgtcaaagatcaagtgac
cataggtgtgtggattcttttctgggtttttaattctattccattgatct
acctctctgtcactgcaccatgcagtttttatcacaagtgctctgtagta
cagcctaatgtcaggcatggtgattccaccagaggttcttttattgttga
gaatagtttttgctatcctaggttttttatttttccagatgtatttgcaa
attgccctttctatctcagtgaagaattgagttggaattttgatggggat
tgcattgaatctgtagattgctttcggcaggatagccattttcacaacac
atgctcaatttccttccatgaaaagtcaaaatatattaacattggtacac
tggatcttgtcttttcaaaggacaaatatgcagaacacaaaggccaacct
gtgaaccacagatagagggacacacaggaatcaatatcccttaaatgaac
tgagcagacctcactgtaccactgtactaggagaaggtacaccaatgtca
gttggttctctctatttctccatcatgtaacaaaaatcctccgtgttttg
tgctgtaaaataataatgtttcattcctccatttgtatctggaaatacag
tcgaaagagatacaagattcatttggcatagaacctcccaggtgaattgc
caatgattactggataaagttaatccatgagcttgctgactacatcaatc
ttctttccgaacatgtgacaaaat

gaattccttgtttagctctgtaccccatttttaatggggttttttaaatt
tctgtaatccagcttcttgagctctttgtatatattggatattagtcccc
tatcagatttagggttgataaaaattctttcccaatctgttggccttttt
gtcttattgacagtgtcttttgccttacagaagctttgcaattttatgag
gtcctatttatcaattcttgatcttacagcacaatccattgttgttctgt
ttaggaatttttccccctgtgtgggctccattttcaaaggattgttactt
tgagcaattggaattgttccaggtacattataagagatgtgagggaaggc
atgttcattttcttttctttcttttttttttttgtttgctatttttgttt
gactaaataaagtcatattatttggaatctggctattcttcccttccaat
caagagaagtagcgttttccttgagatatcagcatggcattctgattgct
ctaaaagcagcaataccagaggagaccactggtattactgaagacttctt
aataggatctgctcattccaccaaaactccctaaatatgaaataacaaga
ttgcctagattagttgagatctgactcagagatgctgcaagttttaggga
actgtgatcttagatgacgacaaggcttttaaaacaagaaaaaccctgaa
accacaaaattattctaaggtcttagaaagggtccatgctgcccaaggat
actcatgttaaccattatttattacaggacacatccttttctctggcatg
tttataattaacctttgaataacaggagtgagatacatttctacaagttg
tagagcttcaatagatggcaaagtcatgtgtaaagtaacaggcgttattt
tcagcaaaatgaatgtaactgtgcaacgatgatccatcaccatggtttaa
catgccttcatgaaggtctacaatttctttactcagaggtcaagaagaaa
taacacctctgtgtaattatgggcctggctgtcttctgctgaacacagtg
atactttatgaccatagtcatcttcctagagtaaggactgagcctagtga
caaaaaatcaatcctaattcactcgactaatcgatgagtctcttctactt
aaactctggattacctttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92298911_92300127
seq2: B6Ng01-317O05.g_67_1236

seq1  GAATTCCTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTTTTTAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTAGCTCTGTACCCCATTTTTAATGGGGTTTTTTAAATT  50

seq1  TCTGTAATCCAGCTTCTTGAGCTCTTTGTATATATTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATCCAGCTTCTTGAGCTCTTTGTATATATTGGATATTAGTCCCC  100

seq1  TATCAGATTTAGGGTTGATAAAAATTCTTTCCCAATCTGTTGGCCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATTTAGGGTTGATAAAAATTCTTTCCCAATCTGTTGGCCTTTTT  150

seq1  GTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAG  200

seq1  GTCCTATTTATCAATTCTTGATCTTACAGCACAATCCATTGTTGTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATTTATCAATTCTTGATCTTACAGCACAATCCATTGTTGTTCTGT  250

seq1  TTAGGAATTTTTCCCCCTGTGTGGGCTCCATTTTCAAAGGATTGTTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATTTTTCCCCCTGTGTGGGCTCCATTTTCAAAGGATTGTTACTT  300

seq1  TGAGCAATTGGAATTGTTCCAGGTACATTATAAGAGATGTGAGGGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATTGGAATTGTTCCAGGTACATTATAAGAGATGTGAGGGAAGGC  350

seq1  ATGTTCATTTTCTTTTCTTTCTTTTTTTTTTTTGTTTGCTATTTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATTTTCTTTTCTTTCTTTTTTTTTTTTGTTTGCTATTTTTGTTT  400

seq1  GACTAAATAAAGTCATATTATTTGGAATCTGGCTATTCTTCCCTTCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAATAAAGTCATATTATTTGGAATCTGGCTATTCTTCCCTTCCAAT  450

seq1  CAAGAGAAGTAGCGTTTTCCTTGAGATATCAGCATGGCATTCTGATTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAGTAGCGTTTTCCTTGAGATATCAGCATGGCATTCTGATTGCT  500

seq1  CTAAAAGCAGCAATACCAGAGGAGACCACTGGTATTACTGAAGACTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCAGCAATACCAGAGGAGACCACTGGTATTACTGAAGACTTCTT  550

seq1  AATAGGATCTGCTCATTCCACCAAAACTCCCTAAATATGAAATAACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGATCTGCTCATTCCACCAAAACTCCCTAAATATGAAATAACAAGA  600

seq1  TTGCCTAGATTAGTTGAGATCTGACTCAGAGATGCTGCAAGTTTTAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGATTAGTTGAGATCTGACTCAGAGATGCTGCAAGTTTTAGGGA  650

seq1  ACTGTGATCTTAGATGACGACAAGGCTTTTAAAACAAGAAAAACCCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATCTTAGATGACGACAAGGCTTTTAAAACAAGAAAAACCCTGAA  700

seq1  ACCACAAAATTATTCTAAGGTCTTAGAAAGGGTCCATGCTGCCCAAGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAATTATTCTAAGGTCTTAGAAAGGGTCCATGCTGCCCAAGGAT  750

seq1  ACTCATGTTAACCATTATTTATTACAGGACACATCCTTTTCTCTGGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTTAACCATTATTTATTACAGGACACATCCTTTTCTCTGGCATG  800

seq1  TTTATAATTAACCTTTGAATAACAGGAGTGAGATACATTTCTACAAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTAACCTTTGAATAACAGGAGTGAGATACATTTCTACAAGTTG  850

seq1  TAGAGCTTCAATAGATGGCAAAGTCATGTGTAAAGTAACAGGGCGTTATT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGAGCTTCAATAGATGGCAAAGTCATGTGTAAAGTAACA-GGCGTTATT  899

seq1  TTCAGCAAAATGAATGTAACTGTGCAACGATGATCCATCACCATGGTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAATGAATGTAACTGTGCAACGATGATCCATCACCATGGTTTA  949

seq1  ACATGCCTTCCATGAAGGTCTACAATTTCTTTAACCTTCAGAGGTC-AGA  999
      ||||||||| |||||||||||||||||||||||    ||||||||| |||
seq2  ACATGCCTT-CATGAAGGTCTACAATTTCTTTA---CTCAGAGGTCAAGA  995

seq1  AGAAAT-ACA-CTCTGTTGGTAATTTATGGGCTTGGCTGTCTTCTGCTGA  1047
      |||||| ||| ||||||  |||| |||||||| |||||||||||||||| 
seq2  AGAAATAACACCTCTGT--GTAA-TTATGGGCCTGGCTGTCTTCTGCTG-  1041

seq1  AACACAGTGATACTTTTATGACACATTAAGTTTCATCCTTTCTTTAGAAG  1097
      ||||||||||||| |||||||| |||  ||  |||| ||| ||  ||   
seq2  AACACAGTGATAC-TTTATGAC-CAT--AG--TCAT-CTTCCTAGAG---  1081

seq1  TTAAGGACCTGAAGCATAAGTGACAAAAAAATTCTATTTCTTTAATTCTA  1147
       |||||| ||| ||| | ||||||||||||  || ||     |||||| |
seq2  -TAAGGA-CTG-AGCCT-AGTGACAAAAAA--TCAAT---CCTAATTC-A  1121

seq1  CTCAGACTTATATTTCCTGAATGGTAGCTTCTTTTTCCTCTACTTAAAAC  1197
      ||| ||||           ||| |  |  ||    || ||||||| ||||
seq2  CTC-GACT-----------AATCGATGAGTC----TCTTCTACTT-AAAC  1154

seq1  TCTTGGGTATTTACCTTTTT  1217
      ||| |     ||||||||||
seq2  TCTGG----ATTACCTTTTT  1170


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