BAC Information

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BAC

Clone NameB6Ng01-319A16
Chromosome11 (Build37)
Map Location 12,828,151 - 12,828,966
singlet/doubletsinglet
Overlap genenone
Upstream geneGrb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319A16.bB6Ng01-319A16.g
ACCGA108775GA108776
length1,169935
definitionB6Ng01-319A16.b B6Ng01-319A16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttaagccgggcatggtggcacactcctttaatcccagca
cttgggaggcagaggcaggcagacttctgagttcgaggccagtctggtct
acaaagtgagttccagaacagacagggctataaagagaaactatgtctca
aaaaataaaataaataaataaaaacaacaacaacaacaacaaaaaataac
ccaacaacaacaaaagctctgtttagctctactccatttttaaattgggt
tatttgtttgttttcttttacttttgagtctggcttctttagttctttat
atagtttggatattagctctctaatggatgtagggttagtgaagatcttt
ccccaatctgtaggttgctgttttgtcctattgacaggagctttttagtt
tcatgagatcccatttatcaatttttttatcttagagcataagccctgat
gttctattcaggaagattcaccctgtgccaatgtgttcgaagctatttct
gacttgctcttctattagattgagtgtatctcgtttcatcttgaggtcct
tgttccacttggacttgacctttgtacaaagtgataaatctagatcattt
ttgcattcttcataccagtttgaccagcatcatttgttgaagatgctttt
gttctttccattgatggttttgacttctttgtccataggtatgtgggtac
ctgcttcttgtaagtggatgcaacatgactggctgccaaaataatttacg
ctcccatatgttctattttaagtattttttcacatctgaaaaagaaacta
aggcaaaagacctcacaaattactcagactctcacccaatagtctttaca
tacattacattgaataaggcccttgcacacactgtcatttccaggacttt
agcaaaggtcacttgggtacagtgaaactgccagggagagtaaacctaac
taactgcagaagcattatcactggaaacacttcattttagagtgcagaat
cagaggctgagttatcagaagactatgaaatcctgcttggagatgtaaca
aactttaggacaaaattaggagatgactctcccttaattgttcgaagaga
acatcctgctcagccagaatgggtcatccacttatctgcgaatctcaagg
taacttggttggttccaag

gaattcattgtccacaactcagtagatattcagcaaagagtgatatcctg
atatatggtccttccttcttacaattctttaagtttctgctgacactatc
tgtcctcttacctttacggtggggttttcagataattaagaaagtagtta
atgatattcatgtttttatttgcctgggaaaactgtgattcaaggaatgc
tgagtattactatgtcttatgttgataagcatatgctgcaatccagatta
agctgtcctgctattcaaacaatatttactgaagcatgaccagatgagaa
gaataacagtaattgaaaattattagcttaaaagctcagaatatccaaga
tacaattcacagatcatattaagctcactaagaaggaagaccaaagtgtg
gatgcttcagtcattctcagaaaggggaacaaaatactcatgggaggaaa
tatggagacaaagtgtggagcagagactgaaggaaaggccttcagagatt
gccccacctgtgcatccatcccatgtacagtcaccaaacccagactctat
tgtggatgtcaagaagtgcttgcttacaggaatctggtatagctggctcc
tgagaggctcttccagagcctggaaaatgcagaggcagaagttcacagtc
aagtattggactgagcatggggtctccaatgaaggagatagagaaaggac
tgaaggagctgaaggggtttgcgatcccgtaggaagaatagcaatatcaa
ccaaggagacctccctccccacagagctcctagggactaaaccaccagcc
aaagagtacatgtggctgggcctatgactccagctccatatgtagcagtg
gatgtacttgtcaggaatcaattggaggagaatcccttggtcccatgaag
gcttgatgccaccgttcaggagaatgccagtgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12828151_12828966
seq2: B6Ng01-319A16.g_67_882

seq1  GAATTCATTGTCCACAACTCAGTAGATATTCAGCAAAGAGTGATATCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCCACAACTCAGTAGATATTCAGCAAAGAGTGATATCCTG  50

seq1  ATATATGGTCCTTCCTTCTTACAATTCTTTAAGTTTCTGCTGACACTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGTCCTTCCTTCTTACAATTCTTTAAGTTTCTGCTGACACTATC  100

seq1  TGTCCTCTTACCTTTACGGTGGGGTTTTCAGATAATTAAGAAAGTAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTTACCTTTACGGTGGGGTTTTCAGATAATTAAGAAAGTAGTTA  150

seq1  ATGATATTCATGTTTTTATTTGCCTGGGAAAACTGTGATTCAAGGAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTCATGTTTTTATTTGCCTGGGAAAACTGTGATTCAAGGAATGC  200

seq1  TGAGTATTACTATGTCTTATGTTGATAAGCATATGCTGCAATCCAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTACTATGTCTTATGTTGATAAGCATATGCTGCAATCCAGATTA  250

seq1  AGCTGTCCTGCTATTCAAACAATATTTACTGAAGCATGACCAGATGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCTGCTATTCAAACAATATTTACTGAAGCATGACCAGATGAGAA  300

seq1  GAATAACAGTAATTGAAAATTATTAGCTTAAAAGCTCAGAATATCCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACAGTAATTGAAAATTATTAGCTTAAAAGCTCAGAATATCCAAGA  350

seq1  TACAATTCACAGATCATATTAAGCTCACTAAGAAGGAAGACCAAAGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCACAGATCATATTAAGCTCACTAAGAAGGAAGACCAAAGTGTG  400

seq1  GATGCTTCAGTCATTCTCAGAAAGGGGAACAAAATACTCATGGGAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTCAGTCATTCTCAGAAAGGGGAACAAAATACTCATGGGAGGAAA  450

seq1  TATGGAGACAAAGTGTGGAGCAGAGACTGAAGGAAAGGCCTTCAGAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGACAAAGTGTGGAGCAGAGACTGAAGGAAAGGCCTTCAGAGATT  500

seq1  GCCCCACCTGTGCATCCATCCCATGTACAGTCACCAAACCCAGACTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACCTGTGCATCCATCCCATGTACAGTCACCAAACCCAGACTCTAT  550

seq1  TGTGGATGTCAAGAAGTGCTTGCTTACAGGAATCTGGTATAGCTGGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGTCAAGAAGTGCTTGCTTACAGGAATCTGGTATAGCTGGCTCC  600

seq1  TGAGAGGCTCTTCCAGAGCCTGGAAAATGCAGAGGCAGAAGTTCACAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCTCTTCCAGAGCCTGGAAAATGCAGAGGCAGAAGTTCACAGTC  650

seq1  AAGTATTGGACTGAGCATGGGGTCTCCAATGAAGGAGATAGAGAAAGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGGACTGAGCATGGGGTCTCCAATGAAGGAGATAGAGAAAGGAC  700

seq1  TGAAGGAGCTGAAGGGGTTTGCGATCCCGTAGGAAGAATAGCAATATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGCTGAAGGGGTTTGCGATCCCGTAGGAAGAATAGCAATATCAA  750

seq1  CCAAGGAGACCTCCCTCCCCACAGAGCTCCTAGGGACTAAACCACCAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGACCTCCCTCCCCACAGAGCTCCTAGGGACTAAACCACCAGCC  800

seq1  AAAGAGTACATGTGGC  816
      ||||||||||||||||
seq2  AAAGAGTACATGTGGC  816


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