MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-320C02
Chromosome	11 (Build37)
Map Location	31,666,820 - 31,781,543
singlet/doublet	doublet
Overlap gene	Cpeb4
Upstream gene	Psme4, Gpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2, 2310022M17Rik
Downstream gene	4930524B15Rik, Nsg2, LOC669207, Il9r, 3300001G02Rik, Rhbdf1, Mpg, Mare, Hba-x, Hba-a1, F830116E18Rik, Hbq1, Sh3pxd2b, Ubtd2, 1700007I06Rik, Stk10, Fbxw11, LOC666616, 1700008A04Rik, LOC666620
Link	Open Mouse BAC browser

Click to get alignment info.

name	Psme4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103554 MGI:2143994
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr75 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237716 MGI:2441843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042469 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	4933407N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66753 MGI:1914003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65257 MGI:1929749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chac2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68044 MGI:1915294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20856 MGI:1316731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310022M17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69556 MGI:1916806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpeb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67579 MGI:1914829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930524B15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67592 MGI:1914842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nsg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18197 MGI:1202070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669207 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	Il9r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16199 MGI:96564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3300001G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78372 MGI:1925622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhbdf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13650 MGI:104328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268395 MGI:97073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mare (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17168 MGI:109258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hba-x (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15126 MGI:96019
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hba-a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15122 MGI:96015
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F830116E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544763 MGI:3613460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hbq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216635 MGI:2685722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3pxd2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268396 MGI:2442062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubtd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327900 MGI:2444752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700007I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69306 MGI:1916556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20868 MGI:1099439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxw11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103583 MGI:2144023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666616 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	1700008A04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69351 MGI:1916601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC666620 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666620
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Psme4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117956380 GeneID:103554 MGI:2143994
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) activator subunit 4 transcript_id : NM_134013.3

name	Gpr75 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059090 GeneID:237716 MGI:2441843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 75 transcript_id : NM_175490.3

name	4933407N01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205436 GeneID:66753 MGI:1914003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933407N01 gene transcript_id : NM_025745.3

name	Asb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205425 GeneID:65257 MGI:1929749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 3 transcript_id : NM_023906.3

name	Chac2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205429 GeneID:68044 MGI:1915294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ChaC, cation transport regulator homolog 2 (E. coli) transcript_id : NM_026527.2

name	Stc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982532 GeneID:20856 MGI:1316731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stanniocalcin 2 transcript_id : NM_011491.3

name	2310022M17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67906186 GeneID:69556 MGI:1916806
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310022M17 gene transcript_id : NM_001024919.1

name	Cpeb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129821 GeneID:67579 MGI:1914829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylation element binding protein 4 transcript_id : NM_026252.3

name	4930524B15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385771 GeneID:67592 MGI:1914842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930524B15 gene transcript_id : NM_026262.1

name	Nsg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802730 GeneID:18197 MGI:1202070
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuron specific gene family member 2 transcript_id : NM_008741.2

name	Il9r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680438 GeneID:16199 MGI:96564
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 9 receptor transcript_id : NM_008374.1

name	3300001G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801894 GeneID:78372 MGI:1925622
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3300001G02 gene transcript_id : NM_030093.2

name	Rhbdf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32306546 GeneID:13650 MGI:104328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rhomboid family 1 (Drosophila) transcript_id : NM_010117.1

name	Mpg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560564 GeneID:268395 MGI:97073
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-methylpurine-DNA glycosylase transcript_id : NM_010822.2

name	Mare (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363143 GeneID:17168 MGI:109258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha globin regulatory element containing gene transcript_id : NM_181569.2

name	Hba-x (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350815 GeneID:15126 MGI:96019
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hemoglobin X, alpha-like embryonic chain in Hba complex transcript_id : NM_010405.3

name	Hba-a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680174 GeneID:15122 MGI:96015
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hemoglobin alpha, adult chain 1 transcript_id : NM_008218.1

name	F830116E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385981 GeneID:544763 MGI:3613460
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F830116E18 gene transcript_id : NM_001033981.2

name	Hbq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803511 GeneID:216635 MGI:2685722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hemoglobin, theta 1 transcript_id : NM_175000.2

name	Sh3pxd2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63055064 GeneID:268396 MGI:2442062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3 and PX domains 2B transcript_id : NM_177364.3

name	Ubtd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254262 GeneID:327900 MGI:2444752
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin domain containing 2 transcript_id : NM_173784.3

name	1700007I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380128 GeneID:69306 MGI:1916556
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700007I06 gene transcript_id : NM_027031.2

name	Stk10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126362972 GeneID:20868 MGI:1099439
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 10 transcript_id : NM_009288.2

name	Fbxw11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129917 GeneID:103583 MGI:2144023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and WD-40 domain protein 11 transcript_id : NM_134015.2

name	1700008A04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94389934 GeneID:69351 MGI:1916601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 1700008A04 gene, transcript variant 1 transcript_id : XM_126070.5

name	Psme4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117956381 GeneID:103554 MGI:2143994
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] codon_start : 1 product : proteasome (prosome, macropain) activator subunit 4 protein_id : NP_598774.2

name	Gpr75 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059091 CCDS:CCDS24508.1 GeneID:237716 MGI:2441843
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 75 protein_id : NP_780699.2

name	4933407N01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205437 CCDS:CCDS24509.1 GeneID:66753 MGI:1914003
definition	codon_start : 1 note : erlectin product : XTP3-transactivated protein B protein_id : NP_080021.3

name	Chac2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386024 CCDS:CCDS24510.1 GeneID:68044 MGI:1915294
definition	codon_start : 1 product : ChaC, cation transport regulator-like 2 protein_id : NP_080803.1

name	Asb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205426 CCDS:CCDS24511.1 GeneID:65257 MGI:1929749
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : ankyrin repeat-containing SOCS box protein 3 product : ankyrin repeat and SOCS box-containing protein 3 protein_id : NP_076395.2

name	Stc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755676 CCDS:CCDS24512.1 GeneID:20856 MGI:1316731
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : stanniocalcin 2-like product : stanniocalcin 2 protein_id : NP_035621.1

name	2310022M17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906187 CCDS:CCDS24513.1 GeneID:69556 MGI:1916806
definition	codon_start : 1 note : family with sequence similarity 44, member B product : hypothetical protein LOC69556 protein_id : NP_001020090.1

name	Cpeb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138749 CCDS:CCDS24514.1 GeneID:67579 MGI:1914829
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : cytoplasmic polyadenylation element binding protein 4 protein_id : NP_080528.2

name	4930524B15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385772 CCDS:CCDS24515.1 GeneID:67592 MGI:1914842
definition	codon_start : 1 product : hypothetical protein LOC67592 protein_id : NP_080538.1

name	Nsg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679142 CCDS:CCDS24516.1 GeneID:18197 MGI:1202070
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005773 - vacuole [Evidence IEA] GO_function : GO:0050780 - dopamine receptor binding [Evidence IEA] GO_process : GO:0007212 - dopamine receptor signaling pathway [Evidence IEA] codon_start : 1 product : neuron specific gene family member 2 protein_id : NP_032767.1

name	Il9r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680439 CCDS:CCDS24517.1 GeneID:16199 MGI:96564
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 9 receptor protein_id : NP_032400.1

name	3300001G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313436 CCDS:CCDS24518.1 GeneID:78372 MGI:1925622
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006464 - protein modification [Evidence IEA]; GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 exception : mismatches in translation product : RIKEN cDNA 3300001G02 protein_id : NP_084369.1

name	Rhbdf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32306547 CCDS:CCDS24519.1 GeneID:13650 MGI:104328
definition	GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : epidermal growth factor receptor related sequence product : rhomboid family 1 protein_id : NP_034247.1

name	Mpg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106361 CCDS:CCDS24520.1 GeneID:268395 MGI:97073
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IMP] [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006284 - base-excision repair [Evidence IMP]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alkylpurine-DNA-N-glycosylase; 3-methyladenine DNA glycosylase product : N-methylpurine-DNA glycosylase protein_id : NP_034952.1

name	Mare (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38194222 CCDS:CCDS24521.1 GeneID:17168 MGI:109258
definition	codon_start : 1 note : -14 product : alpha globin regulatory element containing protein_id : NP_853547.1

name	Hba-x (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754162 CCDS:CCDS24522.1 GeneID:15126 MGI:96019
definition	GO_component : GO:0005833 - hemoglobin complex [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IEA] GO_process : GO:0015671 - oxygen transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : zeta globin; hemaglobin zeta product : hemoglobin X, alpha-like embryonic chain in Hba complex protein_id : NP_034535.1

name	Hba-a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680175 CCDS:CCDS24523.1 GeneID:15122 MGI:96015
definition	GO_component : GO:0005833 - hemoglobin complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IEA] GO_process : GO:0015671 - oxygen transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alpha 1 globin; alpha-globin; alpha globin 1; haemaglobin alpha 1; alpha globin 2; haemaglobin alpha 2 product : hemoglobin alpha 1 chain protein_id : NP_032244.1

name	F830116E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77020268 CCDS:CCDS24524.1 GeneID:544763 MGI:3613460
definition	GO_component : GO:0005833 - hemoglobin complex [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IEA] GO_process : GO:0015671 - oxygen transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : novel protein similar to hemoglobin alpha product : similar to hemoglobin, theta 1 protein_id : NP_001029153.1

name	Hbq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239411 CCDS:CCDS24525.1 GeneID:216635 MGI:2685722
definition	GO_component : GO:0005833 - hemoglobin complex [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IEA] GO_process : GO:0015671 - oxygen transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : novel protein similar to hemoglobin alpha product : hemoglobin, theta 1 protein_id : NP_778165.1

name	Sh3pxd2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63055065 CCDS:CCDS24526.1 GeneID:268396 MGI:2442062
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : SH3 and PX domains 2B protein_id : NP_796338.2

name	Ubtd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254263 CCDS:CCDS24527.1 GeneID:327900 MGI:2444752
definition	GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : dendritic cell-derived ubiquitin-like protein protein_id : NP_776145.2

name	1700007I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312262 CCDS:CCDS24528.1 GeneID:69306 MGI:1916556
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC69306 protein_id : NP_081307.1

name	Stk10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126362973 CCDS:CCDS24529.1 GeneID:20868 MGI:1099439
definition	EC_number : 2.7.11.1 GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : germ cell kinase 1; lymphocyte-oriented kinase; serine/threonine-protein kinase 10 product : serine/threonine kinase 10 protein_id : NP_033314.2

name	Fbxw11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956270 GeneID:103583 MGI:2144023
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : F-box and WD-40 domain protein 1B product : F-box and WD-40 domain protein 11 protein_id : NP_598776.1

name	1700008A04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933803 GeneID:69351 MGI:1916601
definition	codon_start : 1 product : hypothetical protein LOC69351 isoform 1 protein_id : XP_126070.3

name	LOC100042469 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042469
definition	number : 1 pseudo : _no_value

name	LOC666616 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666616
definition	number : 2 pseudo : _no_value

name	LOC666616 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666616
definition	number : 1 pseudo : _no_value

name	LOC666620 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666620
definition	number : 1 pseudo : _no_value

name	LOC669207 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261657 GeneID:669207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : similar to hCG2016250 pseudo : _no_value transcript_id : XR_033651.1

clone name	MSMg01-548B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-306E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-320C02.b	B6Ng01-320C02.g
ACC	GA109582	GA109583
length	1,190	1,076
definition	B6Ng01-320C02.b	B6Ng01-320C02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(31,666,820 - 31,668,012)	(31,780,454 - 31,781,543)
sequence	gaattctttctcttcctctttcccggcacctccccttccaatgtacctca gaacaacctgtaactgtgaggtctgttaatactgcccagactcacctcag caggaggaagctaagtgaaaatgaattcatacattagacactgacaatgt tgaaattttggtttatttactttttatttgagactggtcttgctctgtag cccaggctagcctgccatttgcctttgttgtgcaggaaagccttgaaaca atggcaatcctcctgcctcagcctcccaaggacgttattcatttgtttaa agaaatacactgtatgataccttttaaaacatgcgttctaatggaataga cgaggctctggtttgctaagttgtccttttacaatgtcataacaatgctt cacgttcaccagagatgctttcaccgttgccttcattttttcagatgaag aaacagaggcacagacagggaaaggaacttgcctaaggtttcataaatta tagtttactaaggcagcgtctactcagagagtgagggatgataaccccca atttactaggtccttgaaagaaaacttgcccctttcctctgcatcctcct tccctcccgtccttatggacaagagggtaggtacctgtaacacttccctt ctttcttccctccctcccgccttccttctgtcctccaccccaatcttgta ggggaactgagatagctttaagtcaatgtttctcaacctatgggtctcaa cccctcgggggctgaatgtctctttcacaagggttgactaggaacattgg aaagcacagatttttacatcacgaataataaccatagcaatattgcagtt gtggagtagcaatgaaaataattttatggttggggggtcaccacaacatg aggaactgcattaaagggttgcagctttagggaggttgagaaccactggg ccgtaagtgaatgtgtgttattgacatggcatggcttgcacatctcattc acactgctgttgttctttccctggctctcacgcacactgagcagagcacc ttgtaccctgtcacgtcttatttagcatttttatggggatcaaacttgac ccagggaaggtggaatggccaggcatacaggagggagcccgctggaaact gggtgaattcccctagacagtacagcatgtggggtgctct	gaattccttttataaacaaacagaaaaacaatccccaaagcccagtcctg tcctgttcctttgaattcgtctcagatcacatacctatattccacggaag cctagaattagaaggcccaaattaaatattacactctactcatttgttgc tttagctgatcttactttatttactttttttgatgtctcagaaagaggtg agaccactggtgtttgtgggagtaacactaggttgagcaaggaaaatagg ctaaagcagacatgacagataagtgagccatcactatctttaaaaggtcc ttggaaaaacactgtgtatatcctctaaagactttgtacctttgagaagt gtgttcttttacaatgaaatcctaccatgtctaggagttcctttaactgc tttaagatatatggcagagaagagttttgcgtgtaggtgaaaggactgtc caggagccagtgactactgaaaccatgtgatatgtacttgggagttcagg atactattttgtctagtcaatgtttaaaattttccataatattaaatatc acatgggggaagaaaaccttaccaaaaaggggataaagccacctgttaga cactgtgtttatctgtgttcagaaaaataaagattattatgtagcccaag ttccactattattcatgtgcaacaattttgtttaaaaaattctttaagtt taatcataatgtaccagtaatacaatgattttcacatttaaatgacactt atttagtgtatgtaggggtagggggttatgcacacacatgtgtacaggtg catgagtgccatgcacccctcatagagatcagaagataaaattgatggaa tcagttttctacttctcccatgaagcttctatggatcaaacacaggtcac caggtttggtgactggtgcatgtacccactaagctacctcaccactgttt tttgacattgggaatagaactcaagtcttctcaagagtagaagtactctt acataatccatctctttcagacttatattttcaattaatttttttttgtg tgcggtgtgtgtgatgtgatgagtga
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr11_31666820_31668012
seq2: B6Ng01-320C02.b_44_1233

seq1  GAATTCTTTCTCTTCCTCTTTCCCGGCACCTCCCCTTCCAATGTACCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCTTCCTCTTTCCCGGCACCTCCCCTTCCAATGTACCTCA  50

seq1  GAACAACCTGTAACTGTGAGGTCTGTTAATACTGCCCAGACTCACCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACCTGTAACTGTGAGGTCTGTTAATACTGCCCAGACTCACCTCAG  100

seq1  CAGGAGGAAGCTAAGTGAAAATGAATTCATACATTAGACACTGACAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAAGCTAAGTGAAAATGAATTCATACATTAGACACTGACAATGT  150

seq1  TGAAATTTTGGTTTATTTACTTTTTATTTGAGACTGGTCTTGCTCTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTGGTTTATTTACTTTTTATTTGAGACTGGTCTTGCTCTGTAG  200

seq1  CCCAGGCTAGCCTGCCATTTGCCTTTGTTGTGCAGGAAAGCCTTGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTAGCCTGCCATTTGCCTTTGTTGTGCAGGAAAGCCTTGAAACA  250

seq1  ATGGCAATCCTCCTGCCTCAGCCTCCCAAGGACGTTATTCATTTGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAATCCTCCTGCCTCAGCCTCCCAAGGACGTTATTCATTTGTTTAA  300

seq1  AGAAATACACTGTATGATACCTTTTAAAACATGCGTTCTAATGGAATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACACTGTATGATACCTTTTAAAACATGCGTTCTAATGGAATAGA  350

seq1  CGAGGCTCTGGTTTGCTAAGTTGTCCTTTTACAATGTCATAACAATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTCTGGTTTGCTAAGTTGTCCTTTTACAATGTCATAACAATGCTT  400

seq1  CACGTTCACCAGAGATGCTTTCACCGTTGCCTTCATTTTTTCAGATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTCACCAGAGATGCTTTCACCGTTGCCTTCATTTTTTCAGATGAAG  450

seq1  AAACAGAGGCACAGACAGGGAAAGGAACTTGCCTAAGGTTTCATAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGCACAGACAGGGAAAGGAACTTGCCTAAGGTTTCATAAATTA  500

seq1  TAGTTTACTAAGGCAGCGTCTACTCAGAGAGTGAGGGATGATAACCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACTAAGGCAGCGTCTACTCAGAGAGTGAGGGATGATAACCCCCA  550

seq1  ATTTACTAGGTCCTTGAAAGAAAACTTGCCCCTTTCCTCTGCATCCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAGGTCCTTGAAAGAAAACTTGCCCCTTTCCTCTGCATCCTCCT  600

seq1  TCCCTCCCGTCCTTATGGACAAGAGGGTAGGTACCTGTAACACTTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCGTCCTTATGGACAAGAGGGTAGGTACCTGTAACACTTCCCTT  650

seq1  CTTTCTTCCCTCCCTCCCGCCTTCCTTCTGTCCTCCACCCCAATCTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCCTCCCTCCCGCCTTCCTTCTGTCCTCCACCCCAATCTTGTA  700

seq1  GGGGAACTGAGATAGCTTTAAGTCAATGTTTCTCAACCTATGGGTCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGAGATAGCTTTAAGTCAATGTTTCTCAACCTATGGGTCTCAA  750

seq1  CCCCTCGGGGGCTGAATGTCTCTTTCACAAGGGTTGACTAGGAACATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCGGGGGCTGAATGTCTCTTTCACAAGGGTTGACTAGGAACATTGG  800

seq1  AAAGCACAGATTTTTACATCACGAATAATAACCATAGCAATATTGCAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACAGATTTTTACATCACGAATAATAACCATAGCAATATTGCAGTT  850

seq1  GTGGAGTAGCAATGAAAATAATTTTATGGTT-GGGGGTCACCACAACATG  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGGAGTAGCAATGAAAATAATTTTATGGTTGGGGGGTCACCACAACATG  900

seq1  AGGAACTGCATTAAAGGGTTGCAGCTTTAGGGAGGTTGAGAACCACT-GG  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGAACTGCATTAAAGGGTTGCAGCTTTAGGGAGGTTGAGAACCACTGGG  950

seq1  CCGTAAGTGAATGTGTGTTATTGACATGGCATGGCTTGCACATCTCATTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAAGTGAATGTGTGTTATTGACATGGCATGGCTTGCACATCTCATTC  1000

seq1  ACACTGCTGTTGTTCTTTCCCTGGCTCTCACCGCACACTGAGCCAGAGCA  1048
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  ACACTGCTGTTGTTCTTTCCCTGGCTCTCA-CGCACACTGAG-CAGAGCA  1048

seq1  CCTTGTACCCTGTCACGTCTTATTTAGCATTTTTAT-GGGATCAAAACTT  1097
      |||||||||||||||||||||||||||||||||||| |||||||||   |
seq2  CCTTGTACCCTGTCACGTCTTATTTAGCATTTTTATGGGGATCAAA--CT  1096

seq1  TGACCCAGGGAA-GTGGAATGGCCCAGGGCCATACAAGGAGGGAG-CCGC  1145
      |||||||||||| ||||||||| |||||  ||||| ||||||||| ||||
seq2  TGACCCAGGGAAGGTGGAATGG-CCAGG--CATAC-AGGAGGGAGCCCGC  1142

seq1  TGAGAAAACTGGTGGAAATCCCCAAGACAAGACAGCATGT--GGTGCTCT  1193
      |  | |||||||  ||| ||||| |||||  |||||||||  ||||||||
seq2  T--GGAAACTGGGTGAATTCCCCTAGACAGTACAGCATGTGGGGTGCTCT  1190

seq1: chr11_31780454_31781543
seq2: B6Ng01-320C02.g_66_1141 (reverse)

seq1  TCACTCACATACACACACACACACACACACACAAAAAAAAAAATTAAATT  50
      |||||||    ||||  ||||||||| | |||| |||||||||||||  |
seq2  TCACTCA---TCACA-TCACACACAC-CGCACACAAAAAAAAATTAA--T  43

seq1  TGAAAAATAATAAGTTCTGGAAAGAGATGGATTATTGGTAAAGAGTACTT  100
      ||||||   ||||| ||| ||||||||||||||||  || |||||||| |
seq2  TGAAAA--TATAAG-TCT-GAAAGAGATGGATTAT--GT-AAGAGTAC-T  85

seq1  TCTACTCTTGAGAAGACTTGAGTTCTATTCCCAATGTCAAAAAACAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCTTGAGAAGACTTGAGTTCTATTCCCAATGTCAAAAAACAGTGG  135

seq1  TGAGGTAGCTTAGTGGGTACATGCACCAGTCACCAAACCTGGTGACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAGCTTAGTGGGTACATGCACCAGTCACCAAACCTGGTGACCTGT  185

seq1  GTTTGATCCATAGAAGCTTCATGGGAGAAGTAGAAAACTGATTCCATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATCCATAGAAGCTTCATGGGAGAAGTAGAAAACTGATTCCATCAA  235

seq1  TTTTATCTTCTGATCTCTATGAGGGGTGCATGGCACTCATGCACCTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTCTGATCTCTATGAGGGGTGCATGGCACTCATGCACCTGTAC  285

seq1  ACATGTGTGTGCATAA-CCCCTACCCCTACATACACTAAATAAGTGTCAT  349
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACATGTGTGTGCATAACCCCCTACCCCTACATACACTAAATAAGTGTCAT  335

seq1  TTAAATGTGAAAATCATTGTATTACTGGTACATTATGATTAAACTTAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTGAAAATCATTGTATTACTGGTACATTATGATTAAACTTAAAG  385

seq1  AATTTTTTAAACAAAATTGTTGCACATGAATAATAGTGGAACTTGGGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTAAACAAAATTGTTGCACATGAATAATAGTGGAACTTGGGCTA  435

seq1  CATAATAATCTTTATTTTTCTGAACACAGATAAACACAGTGTCTAACAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAATCTTTATTTTTCTGAACACAGATAAACACAGTGTCTAACAGG  485

seq1  TGGCTTTATCCCCTTTTTGGTAAGGTTTTCTTCCCCCATGTGATATTTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTATCCCCTTTTTGGTAAGGTTTTCTTCCCCCATGTGATATTTAA  535

seq1  TATTATGGAAAATTTTAAACATTGACTAGACAAAATAGTATCCTGAACTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGAAAATTTTAAACATTGACTAGACAAAATAGTATCCTGAACTC  585

seq1  CCAAGTACATATCACATGGTTTCAGTAGTCACTGGCTCCTGGACAGTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACATATCACATGGTTTCAGTAGTCACTGGCTCCTGGACAGTCCT  635

seq1  TTCACCTACACGCAAAACTCTTCTCTGCCATATATCTTAAAGCAGTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTACACGCAAAACTCTTCTCTGCCATATATCTTAAAGCAGTTAAA  685

seq1  GGAACTCCTAGACATGGTAGGATTTCATTGTAAAAGAACACACTTCTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCCTAGACATGGTAGGATTTCATTGTAAAAGAACACACTTCTCAA  735

seq1  AGGTACAAAGTCTTTAGAGGATATACACAGTGTTTTTCCAAGGACCTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAAAGTCTTTAGAGGATATACACAGTGTTTTTCCAAGGACCTTTT  785

seq1  AAAGATAGTGATGGCTCACTTATCTGTCATGTCTGCTTTAGCCTATTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGTGATGGCTCACTTATCTGTCATGTCTGCTTTAGCCTATTTTC  835

seq1  CTTGCTCAACCTAGTGTTACTCCCACAAACACCAGTGGTCTCACCTCTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAACCTAGTGTTACTCCCACAAACACCAGTGGTCTCACCTCTTT  885

seq1  CTGAGACATCAAAAAAAGTAAATAAAGTAAGATCAGCTAAAGCAACAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATCAAAAAAAGTAAATAAAGTAAGATCAGCTAAAGCAACAAAT  935

seq1  GAGTAGAGTGTAATATTTAATTTGGGCCTTCTAATTCTAGGCTTCCGTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGTGTAATATTTAATTTGGGCCTTCTAATTCTAGGCTTCCGTGG  985

seq1  AATATAGGTATGTGATCTGAGACGAATTCAAAGGAACAGGACAGGACTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGGTATGTGATCTGAGACGAATTCAAAGGAACAGGACAGGACTGG  1035

seq1  GCTTTGGGGATTGTTTTTCTGTTTGTTTATAAAAGGAATTC  1090
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGGATTGTTTTTCTGTTTGTTTATAAAAGGAATTC  1076

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information