BAC Information

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BAC

Clone NameB6Ng01-321E01
Chromosome11 (Build37)
Map Location 43,873,322 - 43,988,851
singlet/doubletdoublet
Overlap genenone
Upstream geneAtp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
Downstream geneIl12b, Ublcp1, 3732413I11Rik, Ebf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321E01.bB6Ng01-321E01.g
ACCGA110411GA110412
length874369
definitionB6Ng01-321E01.b B6Ng01-321E01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,873,322 - 43,874,196)(43,988,477 - 43,988,851)
sequence
gaattctctctcaacctaactatttccttccaaataaagaaagtctttct
taaatgaataccacgtttaaaggacttatcatgacttcttgttggtctga
gatgaccatcaggacctggagctctgacccagtgtttgtgtcctctggaa
tctgctgccttccaggaacgttgcacattcccttcccagacagaaagctc
tgacatccttgctttggcaaaagagccagacctgccaggaaggcccagtg
gctgaggccttgaatgctggaaaggaaattcatcttagcaaaaacacaga
gctgtcagacccctccactctctgcctgggatgcaaatctggctgatggc
aatggatgatagacaaaaggtcacacagacactttgtattccatgtcccc
accccctcattttattcctgacaaatgggggggggatgtctgctgagcct
cccatttaccagaggcacttctgcttctggaggaatcctgttccttgcgt
ctctgaggaaataaagatgatgaatagagagacattttatactttattag
catggacaagcagataggacccggtactgattaataaagggatgtttgct
tttttttttttaaatctttgtcaatttagggtttgctgtcctaaaggaaa
agtggaaggtgagcaattatgttctcgttgtgaagtaggaaggagagaga
tggcaaagtgttggctaaccactccataataattaatagctgtacctcag
atgtcagaccctcagagggaagttgagaatactccacagttttagtctga
gttaacaaaacatccttgttgacaaggaaaaaagggtatatccaatgtca
cagacagagagggagggagggagg
attcttatatggctccaatgccttccacagaacacaatcctacaagccaa
acacttcaataaaggctctttccattttgaagctctttgaactgtattgc
taaatcgccctcccaaatgttgcgatttatatatctaccatgaggtgctg
cagcctttatgggctcaataggcaccaaatggccctaagtggttttcttt
tccaatatctattacctccagatcaagatgttaatacctgagagctcttt
cacacttgaagggatattttttgtgatgccagcttgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgagtatagggc
aagattagttcaaatgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_43873322_43874196
seq2: B6Ng01-321E01.b_45_918

seq1  GAATTCTCTCTCAACCTAACTATTTCCTTCCAAATAAAGAAAGTCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCAACCTAACTATTTCCTTCCAAATAAAGAAAGTCTTTCT  50

seq1  TAAATGAATACCACGTTTAAAGGACTTATCATGACTTCTTGTTGGTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATACCACGTTTAAAGGACTTATCATGACTTCTTGTTGGTCTGA  100

seq1  GATGACCATCAGGACCTGGAGCTCTGACCCAGTGTTTGTGTCCTCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCATCAGGACCTGGAGCTCTGACCCAGTGTTTGTGTCCTCTGGAA  150

seq1  TCTGCTGCCTTCCAGGAACGTTGCACATTCCCTTCCCAGACAGAAAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCCTTCCAGGAACGTTGCACATTCCCTTCCCAGACAGAAAGCTC  200

seq1  TGACATCCTTGCTTTGGCAAAAGAGCCAGACCTGCCAGGAAGGCCCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCTTGCTTTGGCAAAAGAGCCAGACCTGCCAGGAAGGCCCAGTG  250

seq1  GCTGAGGCCTTGAATGCTGGAAAGGAAATTCATCTTAGCAAAAACACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCCTTGAATGCTGGAAAGGAAATTCATCTTAGCAAAAACACAGA  300

seq1  GCTGTCAGACCCCTCCACTCTCTGCCTGGGATGCAAATCTGGCTGATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGACCCCTCCACTCTCTGCCTGGGATGCAAATCTGGCTGATGGC  350

seq1  AATGGATGATAGACAAAAGGTCACACAGACACTTTGTATTCCATGTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGATAGACAAAAGGTCACACAGACACTTTGTATTCCATGTCCCC  400

seq1  ACCCCCTCATTTTATTCCTGACAAATGGGGGGGGGATGTCTGCTGAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTCATTTTATTCCTGACAAATGGGGGGGGGATGTCTGCTGAGCCT  450

seq1  CCCATTTACCAGAGGCACTTCTGCTTCTGGAGGAATCCTGTTCCTTGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTACCAGAGGCACTTCTGCTTCTGGAGGAATCCTGTTCCTTGCGT  500

seq1  CTCTGAGGAAATAAAGATGATGAATAGAGAGACATTTTATACTTTATTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGAAATAAAGATGATGAATAGAGAGACATTTTATACTTTATTAG  550

seq1  CATGGACAAGCAGATAGGACCCGGTACTGATTAATAAAGGGATGTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACAAGCAGATAGGACCCGGTACTGATTAATAAAGGGATGTTTGCT  600

seq1  TTTTTTTTTTTAAATCTTTGTCAATTTAGGGTTTGCTGTCCTAAAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAATCTTTGTCAATTTAGGGTTTGCTGTCCTAAAGGAAA  650

seq1  AGTGGAAGGTGAGCAATTATGTTCTCGTTGTGAAGTAGGAAGGAGAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGGTGAGCAATTATGTTCTCGTTGTGAAGTAGGAAGGAGAGAGA  700

seq1  TGGCAAAGTGTTGGCTAACCACTCCATAATAATTAATAGCTGTACCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGTGTTGGCTAACCACTCCATAATAATTAATAGCTGTACCTCAG  750

seq1  ATGTCAGGACCCTCAGAGGGAAGTTGAGAATACTCCACAGTTTTAGTCTG  800
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCA-GACCCTCAGAGGGAAGTTGAGAATACTCCACAGTTTTAGTCTG  799

seq1  AGTTAACAAAACATCCTTGTTGACAAGGAAAAAAGGGTATATCCAATGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAAAACATCCTTGTTGACAAGGAAAAAAGGGTATATCCAATGTC  849

seq1  ACAGACAGAGAGGGAGGGAGGGAGG  875
      |||||||||||||||||||||||||
seq2  ACAGACAGAGAGGGAGGGAGGGAGG  874

seq1: chr11_43988477_43988851
seq2: B6Ng01-321E01.g_65_439 (reverse)

seq1  CCACATTTTGAATAATCTTGCACTATACACACACACACACACACACACAC  50
      ||||||||  | ||||||||| |||||| |||||||||||||||||| ||
seq2  CCACATTTGAACTAATCTTGCCCTATACTCACACACACACACACACATAC  50

seq1  ACACACACACACACACACACACACACACACACACAAGCTGGCATCACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACAAGCTGGCATCACAAA  100

seq1  AAATATCCCTTCAAGTGTGAAAGAGCTCTCAGGTATTAACATCTTGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCCTTCAAGTGTGAAAGAGCTCTCAGGTATTAACATCTTGATCT  150

seq1  GGAGGTAATAGATATTGGAAAAGAAAACCACTTAGGGCCATTTGGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAATAGATATTGGAAAAGAAAACCACTTAGGGCCATTTGGTGCCT  200

seq1  ATTGAGCCCATAAAGGCTGCAGCACCTCATGGTAGATATATAAATCGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCCCATAAAGGCTGCAGCACCTCATGGTAGATATATAAATCGCAA  250

seq1  CATTTGGGAGGGCGATTTAGCAATACAGTTCAAAGAGCTTCAAAATGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGAGGGCGATTTAGCAATACAGTTCAAAGAGCTTCAAAATGGAA  300

seq1  AGAGCCTTTATTGAAGTGTTTGGCTTGTAGGATTGTGTTCTGTGGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTTATTGAAGTGTTTGGCTTGTAGGATTGTGTTCTGTGGAAGGC  350

seq1  ATTGGAGCCATATAAGAATGAATTC  375
      |||||||||||||||||||||||||
seq2  ATTGGAGCCATATAAGAATGAATTC  375