BAC Information

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BAC

Clone NameB6Ng01-322A15
Chromosome11 (Build37)
Map Location 8,293,186 - 8,294,306
singlet/doubletsinglet
Overlap geneLOC665380
Upstream genenone
Downstream geneTns3, LOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322A15.bB6Ng01-322A15.g
ACCGA110988GA110989
length9791,121
definitionB6Ng01-322A15.b B6Ng01-322A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttagctctggaccccattttttatagggttatttgattt
tctggagtccagcttcttgatttctttgtatatattggacattagtcccc
tatcagatttaggattggtaaagatcctttcccaatcagttgatggcctt
tttgtcttactgactgtgtcttttgccttacagaagttttgcaattttat
gaggtcccatttgtattaaggaaaagtaattgttgcttcctgttattttt
gttgttagagttgggattctgttcttgtggtgatcttcttttaggtttgt
tgaaggattattttcttgctttttctagagtgttgtttccctccttgtgt
tggagttttccctttattatcctttaaagggctgatttcgtggaaagata
ttgtgtgaatttggttttgtcatggaatattttggtttctccatctatgg
taattcagagtcttattgggtatagtagcctgggctggcatttgtgtcct
cttaaagtctgtataacatctgtacaggatcttctggctttcatagtctc
tggtgaaaagtctggtgtcattctgataggcctgcctttatatgttactt
gacctttttcccttactgcgtttaatattctatctttatttagtgcattt
gttgttctgattactatgtgtcaggaggaatttcttttctggtccagtct
atttggagttctgtaggcttcttgtatgttcatgggcatctctttcttta
ggttagggaagttttcttctataattttgttgaagatatttactggtcct
ttaagttgaaaatcttcattctcatctactcctattatccataggcttga
tcttctcattgtgtcctagattttctggatgttttgagttagaatctttt
tgtattctgcattttctttgttgtgttcatgttgtctatggaatcttctg
cacctgagattctctcttccatcttcttg
gaattcttctgccttgcaaactctcatgggaagcctgctgttcccttctt
ccacatttctgttttcccagagtttttcgtaccgagtatgatcagagaac
tgaggtttgagggtgcttgataaaaaagtaataaatatgagggaaacaag
aagaatggaaaatacaaaagttaaactcaaaagtgtggtctgtggaggct
gagctgagaatattaacacgagttttaggcgggccttcagtgtgaatatc
ttcagaactcttggcatagttgaaggcccatgggctccctacttcttcct
ctgagagaaggcatctctgtcccccatctgtctgtcacattcagcgtgac
tccctggcacatgcaagcatcagaagactcttggaacaaatgggcccaac
ccagcaccatggcactccaccacgtttcacagtgacttgcggctctcatg
ccctgtcaccctggagacacacacttgttattgccattgtcccatgggaa
tgccacatctcaggagttggttttgttctttgcttggtttccttcagcta
acatactgtgagagtgggcccgagtatcttaccctgctgtagacagagct
gctgtgggaaggtggccacacttttttcattggctagtgaagtaccttgt
agacagaggcagggtggtggttcagacctttagtcttagaatctgcattg
ctcaactcctggcaacttgtttgttctgaatcagatgctttgttttgttg
tgtcatgctgttacatcgatctaagacttccatgtgccgggggattctgc
atgagggtctttagaagcaagccttaaaaaataaatatgagataaagagt
tgttttctctgtgatgcaaacaagaaagacagtatgaagggcaggcttgc
tgcctccctcccggccccagaagctcactacatcttccgttgttccagga
ttggcctgattaggccgatgaggagatgagaaaggacagactcacagaac
acaagcacagacatctgtgattattgtgaggtgtgcagatctgatggggc
acaccaattctaccaaggtatgaagcttaaacttcagtgtgtttcaattt
atgaacaccaggagagttagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_8293186_8294306
seq2: B6Ng01-322A15.g_67_1187 (reverse)

seq1  GCTAACTCTCCTGTGTGGTTCATAA--TG-AACACACTGAGGTTTTAGCT  47
      ||||||||||||| || ||||||||  || |||||||||| |||| ||||
seq2  GCTAACTCTCCTG-GT-GTTCATAAATTGAAACACACTGAAGTTTAAGCT  48

seq1  TCATACC-TGGTAGAATTGGTGTGGCCCCATCAGATCCTGCACACCTCAC  96
      ||||||| ||||||||||||||| |||||||||||| |||||||||||||
seq2  TCATACCTTGGTAGAATTGGTGT-GCCCCATCAGAT-CTGCACACCTCAC  96

seq1  -ATAATCACAGATTGTCTGTGCTTGTG-TCTGTGAGTCTGTCCTTTCTTC  144
       ||||||||||| |||||||||||||| ||||||||||||||||||| ||
seq2  AATAATCACAGA-TGTCTGTGCTTGTGTTCTGTGAGTCTGTCCTTTC-TC  144

seq1  ATCTCCTCATCGGCCTAATCAGGCCAATCCTGGAACAACGGAAGATGTAG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCATCGGCCTAATCAGGCCAATCCTGGAACAACGGAAGATGTAG  194

seq1  TGAGCTTCTGGGGCCGGGAGGGAGGCAGCAAGCCTGCCCTTCATACTGTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCTGGGGCCGGGAGGGAGGCAGCAAGCCTGCCCTTCATACTGTC  244

seq1  TTTCTTGTTTGCATCACAGAGAAAACAACTCTTTATCTCATATTTATTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTGCATCACAGAGAAAACAACTCTTTATCTCATATTTATTTT  294

seq1  TTAAGGCTTGCTTCTAAAGACCCTCATGCAGAATCCCCCGGCACATGGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCTTGCTTCTAAAGACCCTCATGCAGAATCCCCCGGCACATGGAA  344

seq1  GTCTTAGATCGATGTAACAGCATGACACAACAAAACAAAGCATCTGATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGATCGATGTAACAGCATGACACAACAAAACAAAGCATCTGATTC  394

seq1  AGAACAAACAAGTTGCCAGGAGTTGAGCAATGCAGATTCTAAGACTAAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAACAAGTTGCCAGGAGTTGAGCAATGCAGATTCTAAGACTAAAG  444

seq1  GTCTGAACCACCACCCTGCCTCTGTCTACAAGGTACTTCACTAGCCAATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACCACCACCCTGCCTCTGTCTACAAGGTACTTCACTAGCCAATG  494

seq1  AAAAAAGTGTGGCCACCTTCCCACAGCAGCTCTGTCTACAGCAGGGTAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTGTGGCCACCTTCCCACAGCAGCTCTGTCTACAGCAGGGTAAG  544

seq1  ATACTCGGGCCCACTCTCACAGTATGTTAGCTGAAGGAAACCAAGCAAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCGGGCCCACTCTCACAGTATGTTAGCTGAAGGAAACCAAGCAAAG  594

seq1  AACAAAACCAACTCCTGAGATGTGGCATTCCCATGGGACAATGGCAATAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCAACTCCTGAGATGTGGCATTCCCATGGGACAATGGCAATAA  644

seq1  CAAGTGTGTGTCTCCAGGGTGACAGGGCATGAGAGCCGCAAGTCACTGTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTGTGTCTCCAGGGTGACAGGGCATGAGAGCCGCAAGTCACTGTG  694

seq1  AAACGTGGTGGAGTGCCATGGTGCTGGGTTGGGCCCATTTGTTCCAAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGTGGAGTGCCATGGTGCTGGGTTGGGCCCATTTGTTCCAAGAG  744

seq1  TCTTCTGATGCTTGCATGTGCCAGGGAGTCACGCTGAATGTGACAGACAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGATGCTTGCATGTGCCAGGGAGTCACGCTGAATGTGACAGACAG  794

seq1  ATGGGGGACAGAGATGCCTTCTCTCAGAGGAAGAAGTAGGGAGCCCATGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGACAGAGATGCCTTCTCTCAGAGGAAGAAGTAGGGAGCCCATGG  844

seq1  GCCTTCAACTATGCCAAGAGTTCTGAAGATATTCACACTGAAGGCCCGCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAACTATGCCAAGAGTTCTGAAGATATTCACACTGAAGGCCCGCC  894

seq1  TAAAACTCGTGTTAATATTCTCAGCTCAGCCTCCACAGACCACACTTTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCGTGTTAATATTCTCAGCTCAGCCTCCACAGACCACACTTTTG  944

seq1  AGTTTAACTTTTGTATTTTCCATTCTTCTTGTTTCCCTCATATTTATTAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAACTTTTGTATTTTCCATTCTTCTTGTTTCCCTCATATTTATTAC  994

seq1  TTTTTTATCAAGCACCCTCAAACCTCAGTTCTCTGATCATACTCGGTACG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATCAAGCACCCTCAAACCTCAGTTCTCTGATCATACTCGGTACG  1044

seq1  AAAAACTCTGGGAAAACAGAAATGTGGAAGAAGGGAACAGCAGGCTTCCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCTGGGAAAACAGAAATGTGGAAGAAGGGAACAGCAGGCTTCCC  1094

seq1  ATGAGAGTTTGCAAGGCAGAAGAATTC  1121
      |||||||||||||||||||||||||||
seq2  ATGAGAGTTTGCAAGGCAGAAGAATTC  1121