BAC Information

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BAC

Clone NameB6Ng01-322C15
Chromosome11 (Build37)
Map Location 17,253,769 - 17,254,973
singlet/doubletsinglet
Overlap genenone
Upstream geneSec61g, Akt2-ps, LOC665689, LOC627583, Egfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486
Downstream geneEG665748, Etaa1, LOC327871, LOC627696, LOC627716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322C15.bB6Ng01-322C15.g
ACCGA111078GA111079
length1,2051,188
definitionB6Ng01-322C15.b B6Ng01-322C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgacaaatggagattccctacagacacttaaaagagcagcc
aagtactcccatatgcaagaatttacaatggtctaggaaggagggttgtg
gtttaaggaagaactacagtattgcattattcatgaaaaggtcagcagga
acagaacacccctggtgcaagttttcaaaaggctcagaggaatagcataa
attgtgactagggtgtgaaatcctcacctggctcctataatggctgactt
tagaaagggccacctgttatctcagttgtaactactgcctgcttcctgcc
agtctttatgtatgcatttctctgttttgtgtcggataacttcaatgtaa
cttgggtgatgtgtcacctaacttctttgttttcttctgtaataaaagtc
tgaagctagatttgagaaattacattcagatacagcactctctctgtgtc
agtgtccatttgtcactttttgccaactccttgctcacctgaacactgaa
gccctggttccctgctggttgagggacccactgagtccattccataggac
agagggacatctgggttctctccagcttctggatagtataaataagtctg
tgatgaacatagtggagcatgtgcccttattaccagttggaacatcttct
gggaagatgcccaggagtggtttttctggatcttccagtagaagtaggtc
caattttatgacgaaccaccaaactgatttccagagtggttgtgccagct
tgcaggcccactggcaacggaggagtgtttctctttgtccacatactcgc
cagcatctggattttttatcttaggcattctgcctggtgtgaggtggaat
ctcagggtagttttgatttgcatttccctgatgactaaggatattgaaca
cttctttaggtacttctcagtcattcagtattcctcagttgagaattctt
tgtttagctctttacccatttttatagggtactgggttctctgatgtcta
cttctggagtctttggataatactggatattagtcctatcagatttaggg
attggtaaagatctttcccatctgttagttgcattttgttctatcggcag
gttcttaactcactaaagaaggcttggccaattatgagggttcatgtggg
attctgacttagcagatattgaggtcgtcaggaaattccgtggtccagag
tagct
gaattccttacaaaacccatacagctcctcgaggaaaaattggctgaggt
gctataaagtcacagatgtctcagggatttaaattaatactgtaaatctc
aggattatggggaaagagcttggggcttgtctaatagcctccaacctgac
tgtggcgttagtctgactgccacgagagcttgcaggtatgagaacagaga
ttctggtattagaaaatattgaatcagtttgatacctatatgtacaaggg
cctcattttaagttgatttttttttaattgagaatggtatgctcatgaca
gaaatgagttaggattggcttagcctgtggaactcaggtctgcatcagga
caacattggttttgtgagcagacagggtgtggtggttatcataggttgaa
ggagtgctgaagtacggagtgtatcagacactctggcagttcatggcctg
gtgggcaggactatgtcctttcttctggtagttagagtgttaatgctgct
ttcttggggtgggaagccctgagtttatggaggttttctgaaggtaacag
aagggacttctgcttcgcaagtgtacagagatgataggactgtggtcttt
gctatgattttatgctgatctgtcatccttggcaagaacgttaagatgtt
tgactgtgtatttctctcccagagcatggagaatgagtgtcaagagatgg
gtcctgagatgggtctatgtacccttacatctcaagctatgacccttggg
catgatttcatgtgggaacttggtggtaaaggacccaccatcttagcata
aagatggttattgagaaagaacatttgaaatcttttctgaacttgcttgg
tctaaacttgcaaagcttctcttaaataactgtgagttttactctcttcc
aagggagtccctgcaacttccaggaagaagactgtgtatccagtagcatt
tcaacaaacaacaggagcagcagcagcagcagtaactgcacaacacaaca
cacacacaccacacacacaatgattgaaatcagccagacactacagaaga
gccacagagtcagactggaaacatgaattgggggcttcactgagcttggc
cacaacgggggagccaacaattagctgaaatgattgcctcttaacatttt
gatgcaaacatacagctgtccttttatgggtggggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17253769_17254973
seq2: B6Ng01-322C15.g_64_1251

seq1  GAATTCCTTACAAAACCCATACAGCTCCTCGAGGAAAAATTGGCTGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACAAAACCCATACAGCTCCTCGAGGAAAAATTGGCTGAGGT  50

seq1  GCTATAAAGTCACAGATGTCTCAGGGATTTAAATTAATACTGTAAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAAAGTCACAGATGTCTCAGGGATTTAAATTAATACTGTAAATCTC  100

seq1  AGGATTATGGGGAAAGAGCTTGGGGCTTGTCTAATAGCCTCCAACCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATGGGGAAAGAGCTTGGGGCTTGTCTAATAGCCTCCAACCTGAC  150

seq1  TGTGGCGTTAGTCTGACTGCCACGAGAGCTTGCAGGTATGAGAACAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGTTAGTCTGACTGCCACGAGAGCTTGCAGGTATGAGAACAGAGA  200

seq1  TTCTGGTATTAGAAAATATTGAATCAGTTTGATACCTATATGTACAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTATTAGAAAATATTGAATCAGTTTGATACCTATATGTACAAGGG  250

seq1  CCTCATTTTAAGTTGATTTTTTTTTAATTGAGAATGGTATGCTCATGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTTAAGTTGATTTTTTTTTAATTGAGAATGGTATGCTCATGACA  300

seq1  GAAATGAGTTAGGATTGGCTTAGCCTGTGGAACTCAGGTCTGCATCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTTAGGATTGGCTTAGCCTGTGGAACTCAGGTCTGCATCAGGA  350

seq1  CAACATTGGTTTTGTGAGCAGACAGGGTGTGGTGGTTATCATAGGTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGGTTTTGTGAGCAGACAGGGTGTGGTGGTTATCATAGGTTGAA  400

seq1  GGAGTGCTGAAGTACGGAGTGTATCAGACACTCTGGCAGTTCATGGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCTGAAGTACGGAGTGTATCAGACACTCTGGCAGTTCATGGCCTG  450

seq1  GTGGGCAGGACTATGTCCTTTCTTCTGGTAGTTAGAGTGTTAATGCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGGACTATGTCCTTTCTTCTGGTAGTTAGAGTGTTAATGCTGCT  500

seq1  TTCTTGGGGTGGGAAGCCCTGAGTTTATGGAGGTTTTCTGAAGGTAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGGTGGGAAGCCCTGAGTTTATGGAGGTTTTCTGAAGGTAACAG  550

seq1  AAGGGACTTCTGCTTCGCAAGTGTACAGAGATGATAGGACTGTGGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTTCTGCTTCGCAAGTGTACAGAGATGATAGGACTGTGGTCTTT  600

seq1  GCTATGATTTTATGCTGATCTGTCATCCTTGGCAAGAACGTTAAGATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGATTTTATGCTGATCTGTCATCCTTGGCAAGAACGTTAAGATGTT  650

seq1  TGACTGTGTATTTCTCTCCCAGAGCATGGAGAATGAGTGTCAAGAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGTATTTCTCTCCCAGAGCATGGAGAATGAGTGTCAAGAGATGG  700

seq1  GTCCTGAGATGGGTCTATGTACCCTTACATCTCAAGCTATGACCCTTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGATGGGTCTATGTACCCTTACATCTCAAGCTATGACCCTTGGG  750

seq1  CATGATTTCATGTGGGAACTTGGTGGTAAAGGACCCACCATCTTAGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTCATGTGGGAACTTGGTGGTAAAGGACCCACCATCTTAGCATA  800

seq1  AAGATGGTTATTGAGAAAGAACATTTGAAATCTTTTCTGAACTTGCTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTTATTGAGAAAGAACATTTGAAATCTTTTCTGAACTTGCTTGG  850

seq1  TCTAAACTTGCAAAGCTTCTCTTAAATAACTGTGAGTTTTACTCTCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTTGCAAAGCTTCTCTTAAATAACTGTGAGTTTTACTCTCTTCC  900

seq1  AAGGGAGTCCCTGCAACTTCCAGGAAGAAGACTGTGTATTCCAGTAGCAT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGGAGTCCCTGCAACTTCCAGGAAGAAGACTGTGTA-TCCAGTAGCAT  949

seq1  TTCAACAAAACAACAGGAGCAGCAGCAGCAGCAGTAACTGCAACAACAAC  1000
      |||||| ||||||||||||||||||||||||||||||||||       ||
seq2  TTCAAC-AAACAACAGGAGCAGCAGCAGCAGCAGTAACTGC-------AC  991

seq1  AACAACAACAACAACAACAACAACAACAACAATGAATTGAAAATCAAGCC  1050
      ||| ||||||   |||   || |||   |||||| |||| ||||| ||||
seq2  AAC-ACAACA--CACACACACCACACACACAATG-ATTG-AAATC-AGCC  1035

seq1  AAGAACACCACAAGAAGAGCCACAGAGTCAAGAACCTGAGACCATGAA-T  1099
      |   |||| || ||||||||||||||||| |||  |||  | |||||| |
seq2  A--GACACTAC-AGAAGAGCCACAGAGTC-AGA--CTGGAAACATGAATT  1079

seq1  GGGGGC-TCACAGAGCTTGGGCCACCAACCGGGGAGCACACAA-TAGCTA  1147
      |||||| |||| |||||| ||||| |||| |||||||  |||| ||||| 
seq2  GGGGGCTTCACTGAGCTT-GGCCA-CAACGGGGGAGCCAACAATTAGCT-  1126

seq1  GAAATAGATG-CTCTATACA-TTTGTAGCAAACATACAGCTTGCCTTTTA  1195
      |||||   || ||||  ||| ||||  ||||||||||||||  |||||||
seq2  GAAATGATTGCCTCTTAACATTTTGATGCAAACATACAGCTGTCCTTTTA  1176

seq1  --GGTGGGGCCC  1205
        ||||||||||
seq2  TGGGTGGGGCCC  1188