BAC Information

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BAC

Clone NameB6Ng01-324D10
Chromosome11 (Build37)
Map Location 93,245,727 - 93,246,869
singlet/doubletsinglet
Overlap geneCar10
Upstream geneLOC382545, LOC100039286
Downstream geneLOC629636, Utp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324D10.bB6Ng01-324D10.g
ACCGA112588GA112589
length1,1441,171
definitionB6Ng01-324D10.b B6Ng01-324D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgctcagcgctcagggcatcttaatgtcgttgaatcttccag
aactcaggagttgggtaaattgggtctgaggaacaagggagactgtattc
agtgtattactgtagaatgtcaagccagagctcagaggcttaggcaatga
atatttatcatcacaaagaccctatgggtcaagaatttggaagcagctta
attgtaattctggtccagagtttctcaagtagcgtggtcagtatatgagc
aaggttattatgtgacatcttctcttagagggagaaactgtgacatggga
tatcctcactggaggaaccacagtcatgtgatatcttaaataggatcaga
agtctatattcaagctgtagggactctctgtaggctgagtaccctaataa
caggatatgacagccttttcctagaacaagatgtctgagagagataggag
aaaaataccatgaccttatatacactctatgtctgtgtcctaggcttcct
tatcaaagtaccataaactgtctggctacagtagtgtatattcttttaca
cttttgaaggaaagaagttcaacaccatggttcagtgattaagagcatcg
ggtgctcttcaggaaaagcagagttcaattcctagcacctatacagtgtc
tcaaaacctcaagatccaggagatccaaccccttcttctaacctccaaag
gtaccagacatgtatgtggtatacaaacatgcatgcaggcaaaacatgtc
tgtgtaccacatatatgccttggaaggaagacatgagagtattaggaagg
aagagtgagagagaggaattctgtaattatattttaaataaaaattgtca
aacatagtagtatatatccacatttcatagtgattgtttttatgaagaca
ttttctttcaagtatctcacagatattatcatattctcccttccacaccc
tcctctctccctgggcccccactaattcctccctcttcagacatctcact
tctgctttcacactgtggggtgtgtgtctgtctgtctgtctgtctgtctg
tctaagattcataaatgagaaaaagatgtgatattttgttcttttctgag
actggcctattgtcttagtataatgaactcagttgttaccattt
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctcagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggggaggacgtggagaaagaggaacactcctccattgttggtg
ggagtgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatcccacaatatctcttctgggc
atatatccagaagctgctccaactggtaagaaggacacatgctccactat
gttcatagcagccttatcttaatagccagaagctggaaagaacccatatg
cccctcaacagaggaatggatataaaaaatatggtacatttacacaatgg
agtactactcagctattaaaaggaatgaatttatgaaattcctaggcaaa
tggatggacctggaaggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagtatacctgagatataagatacaatttgcaaagcacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgcccctttttagaattgggaa
caatcacccatgaaaggagttacagggacaaagtttggagccgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatca
gcttccaaacaatgacaccattgcatacactagcaagattttgctgaaag
gaccctgatatagctatatcttgtgagactaggcaggggcctagcaaata
cataagtggatgctcacagtcagctattggatggatcacagggcctcccc
atggaggagctagagaaagtatccaaggagctaaagagatctgcaaccct
gtagtgcaacacattatgaactaaccaataccccgagctctgactctagc
tgcatatgtatcaagatgcttagtcagcatcactgggaggaagtccatga
catgcaacctttaatgcccagtactggacggcaagccaaaactggagtgc
gcgtggcctagcgcgcaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93245727_93246869
seq2: B6Ng01-324D10.b_46_1189

seq1  GAATTCACTGCTCAGCGCTCAGGGCATCTTAATGTCGTTGAATCTTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTCAGCGCTCAGGGCATCTTAATGTCGTTGAATCTTCCAG  50

seq1  AACTCAGGAGTTGGGTAAATTGGGTCTGAGGAACAAGGGAGACTGTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGAGTTGGGTAAATTGGGTCTGAGGAACAAGGGAGACTGTATTC  100

seq1  AGTGTATTACTGTAGAATGTCAAGCCAGAGCTCAGAGGCTTAGGCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTACTGTAGAATGTCAAGCCAGAGCTCAGAGGCTTAGGCAATGA  150

seq1  ATATTTATCATCACAAAGACCCTATGGGTCAAGAATTTGGAAGCAGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCATCACAAAGACCCTATGGGTCAAGAATTTGGAAGCAGCTTA  200

seq1  ATTGTAATTCTGGTCCAGAGTTTCTCAAGTAGCGTGGTCAGTATATGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATTCTGGTCCAGAGTTTCTCAAGTAGCGTGGTCAGTATATGAGC  250

seq1  AAGGTTATTATGTGACATCTTCTCTTAGAGGGAGAAACTGTGACATGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTATTATGTGACATCTTCTCTTAGAGGGAGAAACTGTGACATGGGA  300

seq1  TATCCTCACTGGAGGAACCACAGTCATGTGATATCTTAAATAGGATCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCACTGGAGGAACCACAGTCATGTGATATCTTAAATAGGATCAGA  350

seq1  AGTCTATATTCAAGCTGTAGGGACTCTCTGTAGGCTGAGTACCCTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATATTCAAGCTGTAGGGACTCTCTGTAGGCTGAGTACCCTAATAA  400

seq1  CAGGATATGACAGCCTTTTCCTAGAACAAGATGTCTGAGAGAGATAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATGACAGCCTTTTCCTAGAACAAGATGTCTGAGAGAGATAGGAG  450

seq1  AAAAATACCATGACCTTATATACACTCTATGTCTGTGTCCTAGGCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACCATGACCTTATATACACTCTATGTCTGTGTCCTAGGCTTCCT  500

seq1  TATCAAAGTACCATAAACTGTCTGGCTACAGTAGTGTATATTCTTTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGTACCATAAACTGTCTGGCTACAGTAGTGTATATTCTTTTACA  550

seq1  CTTTTGAAGGAAAGAAGTTCAACACCATGGTTCAGTGATTAAGAGCATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAAGGAAAGAAGTTCAACACCATGGTTCAGTGATTAAGAGCATCG  600

seq1  GGTGCTCTTCAGGAAAAGCAGAGTTCAATTCCTAGCACCTATACAGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCTTCAGGAAAAGCAGAGTTCAATTCCTAGCACCTATACAGTGTC  650

seq1  TCAAAACCTCAAGATCCAGGAGATCCAACCCCTTCTTCTAACCTCCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCTCAAGATCCAGGAGATCCAACCCCTTCTTCTAACCTCCAAAG  700

seq1  GTACCAGACATGTATGTGGTATACAAACATGCATGCAGGCAAAACATGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGACATGTATGTGGTATACAAACATGCATGCAGGCAAAACATGTC  750

seq1  TGTGTACCACATATATGCCTTGGAAGGAAGACATGAGAGTATTAGGAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCACATATATGCCTTGGAAGGAAGACATGAGAGTATTAGGAAGG  800

seq1  AAGAGTGAGAGAGAGGAATTCTGTAATTATATTTTAAATAAAAATTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAGAGAGAGGAATTCTGTAATTATATTTTAAATAAAAATTGTCA  850

seq1  AACATAGTAGTATATATCCACATTTCATAGTGATTGTTTTTATGAAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGTAGTATATATCCACATTTCATAGTGATTGTTTTTATGAAGACA  900

seq1  TTTTCTTTCAAGTATCTCACAGATATTATCATATTCTCCCTTCCACACCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCAAGTATCTCACAGATATTATCATATTCTCCCTTCCACACCC  950

seq1  TCCTCTCTCCCT-GGCCCCCACTAATTCCTCCCTCTTCAAGACAATCTCA  999
      |||||||||||| ||||||||||||||||||||||||| |||| ||||||
seq2  TCCTCTCTCCCTGGGCCCCCACTAATTCCTCCCTCTTC-AGAC-ATCTCA  998

seq1  CTTCTGCTTTCACACTGTGGGGTGTGTGTCTGTCTGTCTGTCTGTCTGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTTCACACTGTGGGGTGTGTGTCTGTCTGTCTGTCTGTCTGTC  1048

seq1  TGTCTAAGATTCATAAATGAG-AAAAGATGTGATA-TTTGT--CTTTCTG  1095
      ||||||||||||||||||||| ||||||||||||| |||||   ||||||
seq2  TGTCTAAGATTCATAAATGAGAAAAAGATGTGATATTTTGTTCTTTTCTG  1098

seq1  AGACTGGCCTAATTGTCTTAGTATAATGACCTCCAGTTGTACCCATTT  1143
      |||||||||| |||||||||||||||||| || |||||||  ||||||
seq2  AGACTGGCCT-ATTGTCTTAGTATAATGAACT-CAGTTGTTACCATTT  1144