BAC Information

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BAC

Clone NameB6Ng01-324N14
Chromosome11 (Build37)
Map Location 119,359,565 - 119,491,223
singlet/doubletdoublet
Overlap geneA730011L01Rik, Nptx1, 4932417H02Rik
Upstream geneD11Bwg0517e, Enpp7, Cbx2, Cbx8, Cbx4, Tbc1d16, Ccdc40, Gaa, Eif4a3, Card14, Sgsh, Slc26a11, LOC672511, Rnf213
Downstream geneChmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324N14.bB6Ng01-324N14.g
ACCGA113060GA113061
length1,0151,185
definitionB6Ng01-324N14.b B6Ng01-324N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,490,202 - 119,491,223)(119,359,565 - 119,360,736)
sequence
gaattcccatgctcactcagcatttgttacaacagccgtgacatggaagt
gacctgagtgtccattagcaggcaaacagaggagaaacagaaatgtggtg
tgtacatatatcagatactactgagccacaaagaaggaatccagttgtat
gttgttcaatgcagtaagccaggcacaggaagataaccatacacaccaca
tgacctcatttttatgtgtcaggtagtagtggcagaggcgggatctgggg
cactaggaagacaacggtggaagggtgacatctcaacaccaaggagtaag
ttctgagatgcactgcacagtaccgcaactgcagatagtggtaaaaccct
gcctgtgtgctgctgttgtgggaagcttgcttaaatctggggcctgcctt
atactaggcaagcattctacctgagctgcctcccagccctgaatgacagg
catttactcaatcactccagtgtgcatacatcaaacagtatgccccataa
agtacaattacttataagaaaaaaataagaactaaaatcacagcagcata
cctactcacaagaacgatcacagtgaaagtagccctgttgctggaacagg
agcccagagccaccagcaccgaaggaggaagtagagcaagtctcgtagcc
atgcctgttaaaacccaaccctgcaaacctgaaattgcagtacctggcaa
atgccctaagcaaaggtcatgggagcttggtatctatcagcatcactgat
aacatttaaaacatcttatgttctgggacaatggacagtatggtgtaact
ttaatatttttaaatcttatttttaatgatggttcttaaaggatacggga
agtggacctgtctggaaaggatacggggaagtggacctgccggaaggaca
cggggaagtggacctgtctggaaaggatacgggaagtggacctgctggaa
ggacacgggaagtggacctgtcttggaaggacacggggaagtgacctgct
ggaaggacacgggga
gaattcatggctgcagcttctgacattcctaggagacacagtctcacggc
aaacatgttcctctagctcttagagttttaccacccgagactcagtggtc
cccgagccttaggggcaggagctgtgttgcaggtgtgtgtcggttgggcc
tgggagctacagcactgcatttggatcagttgcgcttgtctgcagtggtc
tccatcctttgctgtcttgagtcagaatctgagtggacacctgacttgga
gtcattgcagctttgagaagtttcttcctgcatcacttgtggaagtgtta
ggaggccaagccccagcacacagtagccagttctctaggcgtgcttaggt
acagatccagcctcagggccccttgagaactgtgctagaagctctcatca
agagcctgggtggggaaatgttctgaagaacacagtaggaatgggtctgc
acagcaggccagtgaggctggtggaggccctgtgctgtgtgcagagcccc
ttagtgctcaagtgagaagctggccatcttcatgtgataaggtgctttta
gtttgaaaactagtctttttgttagagaagacctaagaaaggccctgggt
tgtccccagctcctcctgaaagccatctggtcccctacttcctccacgcc
tcctcacagaatgcacaagacctactgtcctgagctctcctgagtttccc
cattctttggggctctgttcttgcagcttgcctggctctaaaggcattct
ttgcccatctccaaaatgttctgaagatttcagagccctgtcctacttgc
ctggccttttccccatggtttttctgaggtgcattcagtactgccaggct
cacagggtatactcatccaggggtatactcctgagccttcagcaggtggt
cagctcacattgacaaggagtgagccaggagtacagggagcaggtcggcc
tgaggctggcccacaacctcagccaagctcctaaagagatgagattcggg
gggtgctgctgctctcaatacacctccaaggcctagctatcccctgtaca
ctaggtctttggggggccttccattccacaccaggtctcatgcaagcacc
ctggtaaagaatgacactaggtgggacttctctcaaacccacttgcaagt
ggaatcatttcaccatgtacttccacaactctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_119490202_119491223
seq2: B6Ng01-324N14.b_49_1063 (reverse)

seq1  TCCCCGTGTCCTTTCCAGCAGGTCCACTTCCCCGTGTCCTTTCCAGACAG  50
      ||||||||||| ||||||||||| ||||||||||||||||| | ||||||
seq2  TCCCCGTGTCC-TTCCAGCAGGT-CACTTCCCCGTGTCCTTCCAAGACAG  48

seq1  GTCCACTTCCCCGTGTCCTTTCCAGCAGGTCCACTTCCCCGTATCCTTTC  100
      |||||||| ||||||||| ||||||||||||||||| |||||||||||||
seq2  GTCCACTT-CCCGTGTCC-TTCCAGCAGGTCCACTT-CCCGTATCCTTTC  95

seq1  CAGACAGGTCCACTTCCCCGTGTCCTTTCCGGCAGGTCCACTTCCCCGTA  150
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGACAGGTCCACTTCCCCGTGTCC-TTCCGGCAGGTCCACTTCCCCGTA  144

seq1  TCCTTTCCAGACAGGTCCACTTCCCCGTATCCTTTAAGAACCATCATTAA  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCTTTCCAGACAGGTCCACTT-CCCGTATCCTTTAAGAACCATCATTAA  193

seq1  AAATAAGATTTAAAAATATTAAAGTTACACCATACTGTCCATTGTCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGATTTAAAAATATTAAAGTTACACCATACTGTCCATTGTCCCAG  243

seq1  AACATAAGATGTTTTAAATGTTATCAGTGATGCTGATAGATACCAAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGATGTTTTAAATGTTATCAGTGATGCTGATAGATACCAAGCTC  293

seq1  CCATGACCTTTGCTTAGGGCATTTGCCAGGTACTGCAATTTCAGGTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACCTTTGCTTAGGGCATTTGCCAGGTACTGCAATTTCAGGTTTGC  343

seq1  AGGGTTGGGTTTTAACAGGCATGGCTACGAGACTTGCTCTACTTCCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGGTTTTAACAGGCATGGCTACGAGACTTGCTCTACTTCCTCCT  393

seq1  TCGGTGCTGGTGGCTCTGGGCTCCTGTTCCAGCAACAGGGCTACTTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCTGGTGGCTCTGGGCTCCTGTTCCAGCAACAGGGCTACTTTCAC  443

seq1  TGTGATCGTTCTTGTGAGTAGGTATGCTGCTGTGATTTTAGTTCTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCGTTCTTGTGAGTAGGTATGCTGCTGTGATTTTAGTTCTTATTT  493

seq1  TTTTCTTATAAGTAATTGTACTTTATGGGGCATACTGTTTGATGTATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTATAAGTAATTGTACTTTATGGGGCATACTGTTTGATGTATGCA  543

seq1  CACTGGAGTGATTGAGTAAATGCCTGTCATTCAGGGCTGGGAGGCAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGTGATTGAGTAAATGCCTGTCATTCAGGGCTGGGAGGCAGCTC  593

seq1  AGGTAGAATGCTTGCCTAGTATAAGGCAGGCCCCAGATTTAAGCAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAATGCTTGCCTAGTATAAGGCAGGCCCCAGATTTAAGCAAGCTT  643

seq1  CCCACAACAGCAGCACACAGGCAGGGTTTTACCACTATCTGCAGTTGCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACAGCAGCACACAGGCAGGGTTTTACCACTATCTGCAGTTGCGG  693

seq1  TACTGTGCAGTGCATCTCAGAACTTACTCCTTGGTGTTGAGATGTCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGCAGTGCATCTCAGAACTTACTCCTTGGTGTTGAGATGTCACCC  743

seq1  TTCCACCGTTGTCTTCCTAGTGCCCCAGATCCCGCCTCTGCCACTACTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCGTTGTCTTCCTAGTGCCCCAGATCCCGCCTCTGCCACTACTAC  793

seq1  CTGACACATAAAAATGAGGTCATGTGGTGTGTATGGTTATCTTCCTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACATAAAAATGAGGTCATGTGGTGTGTATGGTTATCTTCCTGTGC  843

seq1  CTGGCTTACTGCATTGAACAACATACAACTGGATTCCTTCTTTGTGGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTACTGCATTGAACAACATACAACTGGATTCCTTCTTTGTGGCTC  893

seq1  AGTAGTATCTGATATATGTACACACCACATTTCTGTTTCTCCTCTGTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTATCTGATATATGTACACACCACATTTCTGTTTCTCCTCTGTTTG  943

seq1  CCTGCTAATGGACACTCAGGTCACTTCCATGTCACGGCTGTTGTAACAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAATGGACACTCAGGTCACTTCCATGTCACGGCTGTTGTAACAAA  993

seq1  TGCTGAGTGAGCATGGGAATTC  1022
      ||||||||||||||||||||||
seq2  TGCTGAGTGAGCATGGGAATTC  1015

seq1: chr11_119359565_119360736
seq2: B6Ng01-324N14.g_66_1250

seq1  GAATTCATGGCTGCAGCTTCTGACATTCCTAGGAGACACAGTCTCACGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCTGCAGCTTCTGACATTCCTAGGAGACACAGTCTCACGGC  50

seq1  AAACATGTTCCTCTAGCTCTTAGAGTTTTACCACCCGAGACTCAGTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTCCTCTAGCTCTTAGAGTTTTACCACCCGAGACTCAGTGGTC  100

seq1  CCCGAGCCTTAGGGGCAGGAGCTGTGTTGCAGGTGTGTGTCGGTTGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCCTTAGGGGCAGGAGCTGTGTTGCAGGTGTGTGTCGGTTGGGCC  150

seq1  TGGGAGCTACAGCACTGCATTTGGATCAGTTGCGCTTGTCTGCAGTGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTACAGCACTGCATTTGGATCAGTTGCGCTTGTCTGCAGTGGTC  200

seq1  TCCATCCTTTGCTGTCTTGAGTCAGAATCTGAGTGGACACCTGACTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTTTGCTGTCTTGAGTCAGAATCTGAGTGGACACCTGACTTGGA  250

seq1  GTCATTGCAGCTTTGAGAAGTTTCTTCCTGCATCACTTGTGGAAGTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGCAGCTTTGAGAAGTTTCTTCCTGCATCACTTGTGGAAGTGTTA  300

seq1  GGAGGCCAAGCCCCAGCACACAGTAGCCAGTTCTCTAGGCGTGCTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCAAGCCCCAGCACACAGTAGCCAGTTCTCTAGGCGTGCTTAGGT  350

seq1  ACAGATCCAGCCTCAGGGCCCCTTGAGAACTGTGCTAGAAGCTCTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCAGCCTCAGGGCCCCTTGAGAACTGTGCTAGAAGCTCTCATCA  400

seq1  AGAGCCTGGGTGGGGAAATGTTCTGAAGAACACAGTAGGAATGGGTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGGGTGGGGAAATGTTCTGAAGAACACAGTAGGAATGGGTCTGC  450

seq1  ACAGCAGGCCAGTGAGGCTGGTGGAGGCCCTGTGCTGTGTGCAGAGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGCCAGTGAGGCTGGTGGAGGCCCTGTGCTGTGTGCAGAGCCCC  500

seq1  TTAGTGCTCAAGTGAGAAGCTGGCCATCTTCATGTGATAAGGTGCTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTCAAGTGAGAAGCTGGCCATCTTCATGTGATAAGGTGCTTTTA  550

seq1  GTTTGAAAACTAGTCTTTTTGTTAGAGAAGACCTAAGAAAGGCCCTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAACTAGTCTTTTTGTTAGAGAAGACCTAAGAAAGGCCCTGGGT  600

seq1  TGTCCCCAGCTCCTCCTGAAAGCCATCTGGTCCCCTACTTCCTCCACGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGCTCCTCCTGAAAGCCATCTGGTCCCCTACTTCCTCCACGCC  650

seq1  TCCTCACAGAATGCACAAGACCTACTGTCCTGAGCTCTCCTGAGTTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAGAATGCACAAGACCTACTGTCCTGAGCTCTCCTGAGTTTCCC  700

seq1  CATTCTTTGGGGCTCTGTTCTTGCAGCTTGCCTGGCTCTAAAGGCATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTGGGGCTCTGTTCTTGCAGCTTGCCTGGCTCTAAAGGCATTCT  750

seq1  TTGCCCATCTCCAAAATGTTCTGAAGATTTCAGAGCCCTGTCCTACTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATCTCCAAAATGTTCTGAAGATTTCAGAGCCCTGTCCTACTTGC  800

seq1  CTGGCCTTTTCCCCATGGTTTTTCTGAGGTGCATTCAGTACTGCCAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTTTCCCCATGGTTTTTCTGAGGTGCATTCAGTACTGCCAGGCT  850

seq1  CACAGGGTATACTCATCCA-GGGTATACT-CTGAGCCTTCAGCAGGTGGT  898
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  CACAGGGTATACTCATCCAGGGGTATACTCCTGAGCCTTCAGCAGGTGGT  900

seq1  CAGCTCACATTGACAAGGAGTGAGCCAGGAGTACAAGGAGCAGGTCGGCC  948
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGCTCACATTGACAAGGAGTGAGCCAGGAGTACAGGGAGCAGGTCGGCC  950

seq1  TGAGGCTGG-CCACCACCTCAGCCAAGCTCCTAAAAGAGATGAGATTC-G  996
      ||||||||| |||| ||||||||||||||||| ||||||||||||||| |
seq2  TGAGGCTGGCCCACAACCTCAGCCAAGCTCCT-AAAGAGATGAGATTCGG  999

seq1  GGGGTGCTGCTGCTCCTCATACA-CTCCAGGCCCTAGGCTATTCCCTGTA  1045
      |||||||||||||||   ||||| ||||| | |||| ||||| |||||||
seq2  GGGGTGCTGCTGCTCTCAATACACCTCCAAGGCCTA-GCTATCCCCTGTA  1048

seq1  CACTAGGTCTTTGGGGG--CTCTCA-TCCACACCAGGTCCCAATGCAAGC  1092
      |||||||||||||||||  ||  || ||||||||||||| | ||||||||
seq2  CACTAGGTCTTTGGGGGGCCTTCCATTCCACACCAGGTCTC-ATGCAAGC  1097

seq1  ACC--TGTAA--GATGACACTTAAGT-TGAC-TCTCCAACACCCACTTGC  1136
      |||   ||||   ||||||| || ||  ||| ||||  | ||||||||||
seq2  ACCCTGGTAAAGAATGACAC-TAGGTGGGACTTCTCTCAAACCCACTTGC  1146

seq1  AAGTGG-ATCATTTCACCCTGT-CTTCCA-GACTCTGGG  1172
      |||||| ||||||||||| ||| ||||||  ||||||||
seq2  AAGTGGAATCATTTCACCATGTACTTCCACAACTCTGGG  1185