BAC Information

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BAC

Clone NameB6Ng01-325K08
Chromosome11 (Build37)
Map Location 26,399,478 - 26,399,785
singlet/doubletsinglet
Overlap geneVrk2
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl
Downstream geneEG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325K08.bB6Ng01-325K08.g
ACCGA113653GA113654
length1,243308
definitionB6Ng01-325K08.b B6Ng01-325K08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagacttctagccattataactaatctcagcaacatctttatta
ataaaatgagaaaccactacaataaattgtctttttactcatgaggtgtt
tgtttattccagaatcataaaaatccataggattaggaaatccatacagg
attcagtgagttcttggtatgtattttgttcatcttgctgcatgggaagt
attctgcctccaaaaagttatcaagattctggaagaaggatcagttgggt
ggagaatggtcagacgaatatgagggtggtgcaaactcagtagactgtga
catttgacttttgcagcattatttctgtggcatatggctgaacactgttc
tgaagaaatgggcccttactgcttagtagtgtcacctgcaggcattgcaa
tttccaatgcatctcataagttgtacaaatcaaacttctcagaggtcata
gtttcacaggcctcagaaagctgtaaagggtcagaccacaggagccatga
cccttttttgtgccagttttattttggtaagtgatttggagattcttctt
ggtccagccacatcagtcatcatacataataatctaacagaaaagtgatg
aactcactgataagtgaatattagcctagaagctcggtatacccaagata
caattcacagaccacatgaagctcgagaagaaagaagaccaaagagtgga
tacttagatccttcttagaaggggagaaaatatagagatacagtggagca
gagactgaaggaaaggccatcaagagactgcctcacctgggtatcctccc
caaatacagttaccaaacccacacactattgtggatgccatgggaggaga
tagagagacaaagtgtggagcagagactgaaggaaaggccatccagaaac
taccctacctggggatccatcccatatacagttacaaaacccagacacta
ttgtggatgccaacaagtgctgctgacaggagcctgatatagctgtctcc
tgaagaggttctggcagtacctgacaaataacagaggtggatgctttcag
ccaacactgggctgaacacaaggtcccaatggaggagtagaagaagacca
gactgaggagttgcagctcccctaggagacaacatatgaactacagtatc
cgaactcaggactaaaccccaacaggttacatgagaacatgagtgcgccc
atattgcagaagagatggtcctgttctacaacactcattatga

ttaaaaggcagagccttgtaacctatgtgaaaacagatgaaaaaagtatg
tggtggtctcaggaatctggatgactacctaaagggaaggcagttaggag
caaggttcaaactgagcagatgattaagcaagggtttaagttacaaagtt
acttgtcctgctttctagtgtgtatttcatctcccatgaggcttaatgaa
gagttgacctaagtctgaagtttctcttaactttcaagttcctatttaaa
acatatttaaactgtacaattcattgattattttgtggtgtgtgtgtgtg
tgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26399478_26399785
seq2: B6Ng01-325K08.g_71_378 (reverse)

seq1  CACACACACACACACACACACCACAAAATAATCAATGAATTGTACAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACCACAAAATAATCAATGAATTGTACAGTTT  50

seq1  AAATATGTTTTAAATAGGAACTTGAAAGTTAAGAGAAACTTCAGACTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTTTAAATAGGAACTTGAAAGTTAAGAGAAACTTCAGACTTAG  100

seq1  GTCAACTCTTCATTAAGCCTCATGGGAGATGAAATACACACTAGAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTCTTCATTAAGCCTCATGGGAGATGAAATACACACTAGAAAGCA  150

seq1  GGACAAGTAACTTTGTAACTTAAACCCTTGCTTAATCATCTGCTCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGTAACTTTGTAACTTAAACCCTTGCTTAATCATCTGCTCAGTTT  200

seq1  GAACCTTGCTCCTAACTGCCTTCCCTTTAGGTAGTCATCCAGATTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTGCTCCTAACTGCCTTCCCTTTAGGTAGTCATCCAGATTCCTGA  250

seq1  GACCACCACATACTTTTTTCATCTGTTTTCACATAGGTTACAAGGCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCACATACTTTTTTCATCTGTTTTCACATAGGTTACAAGGCTCTG  300

seq1  CCTTTTAA  308
      ||||||||
seq2  CCTTTTAA  308


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